EY756376

Overview
NameEY756376
Unique NameEY756376
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length532
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig7252 contig Csv1_Contig7252:168..699. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY756376 vs. ExPASy Swiss-Prot
Match: CLPR3_ARATH (ATP-dependent Clp protease proteolytic subunit-related protein 3, chloroplastic OS=Arabidopsis thaliana GN=CLPR3 PE=1 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 5.368e-18
Identity = 41/62 (66.13%), Postives = 52/62 (83.87%), Query Frame = 2
Query:    8 SEHTGNSEEFVTKTIRRPYHMDSRRAKEFGVIDKVLWRGQETIMAEVAPPEEWDKSAGIKVV 193
            S+HTGNS E V   +RRPY+MD+ +AKEFGVID++LWRGQE I+A+V P EE+DK+AGIK V
Sbjct:  268 SKHTGNSVETVANVMRRPYYMDAPKAKEFGVIDRILWRGQEKIIADVVPSEEFDKNAGIKSV 329          
The following BLAST results are available for this feature:
BLAST of EY756376 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
CLPR3_ARATH5.368e-1866.13ATP-dependent Clp protease proteolytic subunit-rel... [more]
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Properties
Property NameValue
Genbank descriptionCS13-C1-001-007-H08-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY756376 ID=EY756376; Name=EY756376; organism=Citrus sinensis; type=EST; length=532bp
CCACGCGTCCGAGCACACTGGAAATTCAGAGGAGTTTGTGACTAAAACAA
TTAGAAGACCATATCATATGGACTCTAGAAGAGCCAAGGAATTTGGAGTC
ATCGACAAGGTTCTCTGGCGTGGTCAGGAAACTATTATGGCGGAAGTTGC
TCCTCCAGAGGAATGGGATAAGAGTGCTGGGATTAAAGTTGTAGATAAAT
TTTGATTTTAATCTCTTCACTGGATACTTATCGCAGGAAGAAGTTCTGAT
ATCTGAAGGCATCTCGGAGAAGCTACCATGATTTATTGAAGCTTAGTTTA
TCTTCAAACGATTACATCTTATGGAGATTCATAGACTGCCCGTATAAGAT
GGCAGCCCAATGTAAGCAAGTCTAAGAGGGACGTTATAGATAGTGATGCT
TGCATATCGTCTGGAGTTGTAGCCTTCTTATCATGATTGATAATTATATG
TATGCAACAAAAGCAGGTTCTCTAGAATTGGAAGTCAATTCAATGATGTC
TGTTTAATTTTAAAAAAAAAAAAAAAAAAAAA
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