EY756374

Overview
NameEY756374
Unique NameEY756374
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length905
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig10967 contig Csv1_Contig10967:23..928. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY756374 vs. ExPASy Swiss-Prot
Match: BI1L_ARATH (BI1-like protein OS=Arabidopsis thaliana GN=At4g15470 PE=2 SV=1)

HSP 1 Score: 159.458 bits (402), Expect = 2.486e-38
Identity = 87/206 (42.23%), Postives = 130/206 (63.11%), Query Frame = 3
Query:  159 DVEAGATPLYPMMSESP-QLRWAFIRKIYSIIAIQLLATIXXXXXXXXXRPISHFFSSTGAGLALYIVLIITPFIVLCPLYYYYQKHPVNYLLLGVFTIALSFAVGLTCAYTKGEVILESAILTAVVVISLTLYTFWAARRGHDFNFLGPFLFGAVMVLLVFAFIRFYFHWVGFL**SMGGLASSFSVG-TSYMNRTLDKRYSYDD 770
            ++  G   LYP +S    QLRW FIRK+Y I++ QLL T           P++   + +  G+ L+  L I PFI++ PL+ Y+QKHPVN +LL +FT++LSF VG++CA T+G ++L++ ILT  VV SLT YTFWAA++G DF+FLGP LF ++++L+V +FI+ +F          GG ++    G   Y    L KR++YD+
Sbjct:   26 EMGVGEATLYPGLSYGENQLRWGFIRKVYGILSAQLLLTTLISAVVVLNPPVNDLLTGS-PGILLF--LCIVPFILIWPLHIYHQKHPVNLILLALFTVSLSFTVGVSCAMTEGRIVLQALILTLSVVGSLTAYTFWAAKKGKDFSFLGPILFTSLIILVVTSFIQMFFPLGPTSVAVYGGFSALVFCGYIVYDTDNLIKRFTYDE 228          
BLAST of EY756374 vs. ExPASy Swiss-Prot
Match: TMBI4_MOUSE (Transmembrane BAX inhibitor motif-containing protein 4 OS=Mus musculus GN=Tmbim4 PE=2 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 2.349e-14
Identity = 48/173 (27.75%), Postives = 84/173 (48.55%), Query Frame = 3
Query:  147 YRKSDVEAGATPLYPMMSESPQLRWAFIRKIYSIIAIQLLATIXXXXXXXXXRPISHFFSSTGAGLALYIVLIITPFIVLCPLYYYYQKHPVNYLLLGVFTIALSFAVGLTCAYTKGEVILESAILTAVVVISLTLYTFWAARRGHDFNFLGPFLFGAVMVLLVFAFIRFYFH 665
            Y +S +E        + S S  +R AF+RK+YSI+++Q+L T          + +  F   + A   L +V  +    ++  L  +   HP+N  LL  FT++ S AV     +    ++L++ I+T  V + LT YT  + R   DF   G  LF  + +L +  F++ +F+
Sbjct:    8 YPRSSIEDDFNYGSCVASASVHIRMAFLRKVYSILSLQVLLTTVTSALFLYFQALRTFVHESPA---LIVVFALGSLGLIFALTLHRHTHPLNLYLLFAFTLSESLAVAAVVTFYDVYLVLQAFIMTTAVFLGLTAYTLQSKR---DFTKFGAGLFAGLWILCLAGFLKLFFY 174          

HSP 2 Score: 26.1794 bits (56), Expect = 2.349e-14
Identity = 9/30 (30.00%), Postives = 17/30 (56.67%), Query Frame = 2
Query:  656 LFPLGRISVMIYGRFGVIIFCGYIIYEQNT 745
            LF       ++    G ++FCG+IIY+ ++
Sbjct:  171 LFFYSETMELVLASLGALLFCGFIIYDTHS 200          
BLAST of EY756374 vs. ExPASy Swiss-Prot
Match: TMBI4_HUMAN (Transmembrane BAX inhibitor motif-containing protein 4 OS=Homo sapiens GN=TMBIM4 PE=1 SV=2)

HSP 1 Score: 69.707 bits (169), Expect = 2.591e-11
Identity = 46/173 (26.59%), Postives = 84/173 (48.55%), Query Frame = 3
Query:  147 YRKSDVEAGATPLYPMMSESPQLRWAFIRKIYSIIAIQLLATIXXXXXXXXXRPISHFFSSTGAGLALYIVLIITPFIVLCPLYYYYQKHPVNYLLLGVFTIALSFAVGLTCAYTKGEVILESAILTAVVVISLTLYTFWAARRGHDFNFLGPFLFGAVMVLLVFAFIRFYFH 665
            Y +S +E        + S +  +R AF+RK+YSI+++Q+L T            +  F   + A   L ++  +    ++  L     K+P+N  LL  FT+  +  V +   +    +IL++ ILT  V   LT+YT  + +   DF+  G  LF  + +L +  F++F+F+
Sbjct:    8 YPRSSIEDDFNYGSSVASATVHIRMAFLRKVYSILSLQVLLTTVTSTVFLYFESVRTFVHESPA---LILLFALGSLGLIFALTLNRHKYPLNLYLLFGFTLLEALTVAVVVTFYDVYIILQAFILTTTVFFGLTVYTLQSKK---DFSKFGAGLFALLWILCLSGFLKFFFY 174          
BLAST of EY756374 vs. ExPASy Swiss-Prot
Match: YQE4_SCHPO (Uncharacterized membrane protein C576.04 OS=Schizosaccharomyces pombe GN=SPCC576.04 PE=2 SV=1)

HSP 1 Score: 60.077 bits (144), Expect = 7.726e-11
Identity = 43/159 (27.04%), Postives = 75/159 (47.17%), Query Frame = 3
Query:  189 PMMSESPQLRWAFIRKIYSIIAIQLLATIXXXXXXXXXRPISHFFSSTGAGLAL--YIVLIITPFIVLCPLYYYYQKHPVNYLLLGVFTIALSFAVGLTCAYTKGEVILESAILTAVVVISLTLYTFWAARRGHDFNFLGPFLFGAVMVLLVFAFIRFY 659
            P+   +  +R AF+RK+Y+I+  QL  T             S +       L L  +I L++   +++ P  Y     P NY+ L +FT      +G    +    +ILE+  +T  V ++LT +TF   +   DF+ LG FL+ ++  L++   I F+
Sbjct:   46 PVAECAKSIRMAFLRKVYAILTAQLFVTSLFGGIFYLHPAFSFWVQMHPWFLILNFFISLVVLFGLIMKPYSY-----PRNYIFLFLFTALEGLTLGTAITFFSARIILEAVFITLGVFVALTAFTF---QSKWDFSRLGGFLYVSLWSLILTPLIFFF 196          

HSP 2 Score: 28.1054 bits (61), Expect = 7.726e-11
Identity = 8/18 (44.44%), Postives = 14/18 (77.78%), Query Frame = 2
Query:  683 MIYGRFGVIIFCGYIIYE 736
            M +  FG ++FCGYI+++
Sbjct:  205 MAFAGFGTLVFCGYILFD 222          
The following BLAST results are available for this feature:
BLAST of EY756374 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 4
Match NameE-valueIdentityDescription
BI1L_ARATH2.486e-3842.23BI1-like protein OS=Arabidopsis thaliana GN=At4g15... [more]
TMBI4_MOUSE2.349e-1427.75Transmembrane BAX inhibitor motif-containing prote... [more]
TMBI4_HUMAN2.591e-1126.59Transmembrane BAX inhibitor motif-containing prote... [more]
YQE4_SCHPO7.726e-1127.04Uncharacterized membrane protein C576.04 OS=Schizo... [more]
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Properties
Property NameValue
Genbank descriptionCS13-C1-001-007-H06-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY756374 ID=EY756374; Name=EY756374; organism=Citrus sinensis; type=EST; length=905bp
CCACGCGTCCGTAGTTCTCAATTCTCATCAAACAAAGCCCTAAGGCAGTT
AGTTCACTCTTCGGTTCCCTCCCATTTTCAACCTCGCGCACTTAAAAGGA
AGAACTTTCGTTCAATCCAAACAGTTCTAAAATGTGGGCCCAGCCTTATC
GGAAGTCCGACGTGGAGGCAGGGGCGACGCCTCTGTATCCGATGATGTCG
GAGAGTCCGCAGCTCCGGTGGGCCTTTATTCGCAAAATCTATTCGATCAT
AGCCATCCAATTACTGGCGACGATCGCGGTAGCATCCGTCGTGGTTTCGG
TGCGTCCGATTTCACACTTCTTTTCGAGTACTGGGGCCGGCCTTGCTCTC
TATATTGTGCTAATAATCACGCCTTTCATTGTGTTGTGTCCGTTGTATTA
CTATTACCAGAAGCATCCAGTGAATTATCTTTTACTTGGAGTTTTCACCA
TCGCTCTTTCGTTTGCGGTGGGTTTGACGTGTGCTTACACCAAAGGGGAG
GTTATTCTGGAATCTGCAATATTGACGGCTGTGGTGGTTATTTCACTCAC
TCTCTACACTTTCTGGGCTGCACGAAGAGGCCATGATTTCAACTTTCTTG
GGCCTTTCTTGTTTGGTGCTGTAATGGTCCTGCTGGTTTTTGCTTTTATC
AGATTCTATTTCCATTGGGTAGGATTTCTGTGATGATCTATGGGCGGTTT
GGCGTCATCATTTTCTGTGGGTACATCATATATGAACAGAACACTTGATA
AACGGTACTCCTATGATGATATATATGGGCTGCGGGTGCTCTGNACTGGA
TATCATTATCTTTTCCCCCACTGCTCCCTACCTTCGAAGTGCGGACATTG
AGGAAATAATGGATGTTCCATCTTCCCTGATTTGGGGAAAACCATTGGGC
AACTG
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