EY756369

Overview
NameEY756369
Unique NameEY756369
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length909
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2759 contig Csv1_Contig2759:190..1098. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of EY756369 vs. ExPASy Swiss-Prot
Match: ACBP4_ARATH (Acyl-CoA-binding domain-containing protein 4 OS=Arabidopsis thaliana GN=ACBP4 PE=1 SV=1)

HSP 1 Score: 262.692 bits (670), Expect = 2.097e-69
Identity = 144/230 (62.61%), Postives = 165/230 (71.74%), Query Frame = 2 
Query:    8 SALVWSVLTSVQGRVPLASEGLSLVVSSYSGEDVIVAFGGYNGRYNNEVHVLKPSHKSTLSSKMIETPVPDSVSAVQNNTNPTRDLESELEVGQEGKIREIVVDNVDSQPLISKHPETTEHLIATXXXXXXXXXXXXXXXXXXXXXXXXDLTEAESQNTDLYKELQSVRGQLAAEQSRCFKLEVDVAELRQKXXXXXXXXXXXXXXXRQKAASEQAAFNAKRQSSGGMWG 697
            S L WSV+ SVQGRVPLASEGLSLVVSSY+GEDV+VAFGGYNGRYNNE+++LKPSHKSTL +K +E P+P S+SAV N T  TRD+ESE+EV QEG++REIV+DNV+     SK    +E +IAT                        +L EAE +NTDLYKELQSVRGQLAAEQSRCFKLEVDVAELRQK               RQKAASEQAA NAKRQ SGG+WG
Sbjct:  430 STLAWSVVASVQGRVPLASEGLSLVVSSYNGEDVLVAFGGYNGRYNNEINLLKPSHKSTLQTKTLEAPLPGSLSAVNNAT--TRDIESEVEVSQEGRVREIVMDNVNPG---SKVEGNSERIIATIKSEKEELEASLNKERMQTLQLRQELGEAELRNTDLYKELQSVRGQLAAEQSRCFKLEVDVAELRQKLQTLETLQKELELLQRQKAASEQAAMNAKRQGSGGVWG 654
[Close]
BLAST of EY756369 vs. ExPASy Swiss-Prot
Match: ACBP5_ARATH (Acyl-CoA-binding domain-containing protein 5 OS=Arabidopsis thaliana GN=ACBP5 PE=1 SV=1)

HSP 1 Score: 206.068 bits (523), Expect = 2.329e-52
Identity = 128/237 (54.01%), Postives = 154/237 (64.98%), Query Frame = 2 
Query:    8 SALVWSVLTSVQGRVPLASEGLSLVVSSYSGEDVIVAFGGYNGRYNNEVHVLKPSHKSTLSSKMI-ETPVPDSVSAVQNNTNPTRDLESELEVGQEGKIREIVV----DNVDSQPLISKHPETTEHLIATXXXXXXXXXXXXXXXXXXXXXXXXDLTEAESQNTDLYKELQSVRGQLAAEQSRCFKLEVDVAELRQKXXXXXXXXXXXXXXXRQKA-ASEQAA-FNAKRQSSGGMWG 697
            S L WSV+TSVQ  VPLASEGLSLVVSSY+GED++VAFGGYNG YNNEV+VLKPSHKS+L SK++  + VPDS SAV N T  TRD+ESE++V  EGK   I+     +  + +  ++K    T  L                           +L E +++NT+LYKELQSVR QLAAEQSRCFKLEV+VAELRQK               RQ+A ASEQAA  NAKRQSSGG+WG
Sbjct:  431 STLAWSVVTSVQEHVPLASEGLSLVVSSYNGEDIVVAFGGYNGHYNNEVNVLKPSHKSSLKSKIMGASAVPDSFSAVNNAT--TRDIESEIKV--EGKADRIITTLKSEKEEVEASLNKEKIQTLQL-------------------------KEELAEIDTRNTELYKELQSVRNQLAAEQSRCFKLEVEVAELRQKLQTMETLQKELELLQRQRAVASEQAATMNAKRQSSGGVWG 638
The following BLAST results are available for this feature:
BLAST of EY756369 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
ACBP4_ARATH2.097e-6962.61Acyl-CoA-binding domain-containing protein 4 OS=Ar... [more]
ACBP5_ARATH2.329e-5254.01Acyl-CoA-binding domain-containing protein 5 OS=Ar... [more]
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Properties
Property NameValue
Genbank descriptionCS13-C1-001-007-G12-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY756369 ID=EY756369; Name=EY756369; organism=Citrus sinensis; type=EST; length=909bp
CCACGCGTCCGCGCTTGTTTGGTCAGTTTTAACTTCTGTCCAAGGTCGTG
TTCCTCTTGCTAGTGAGGGATTGAGTTTGGTCGTGAGCTCCTACAGTGGT
GAAGATGTAATTGTTGCTTTTGGAGGATACAATGGGCGTTACAACAATGA
GGTTCATGTTCTTAAACCAAGCCATAAATCAACTTTGTCATCAAAGATGA
TAGAAACGCCTGTGCCCGACAGTGTTTCTGCCGTCCAAAATAATACAAAT
CCAACCAGAGATTTGGAGTCTGAATTGGAAGTGGGCCAAGAAGGAAAAAT
AAGGGAAATTGTTGTGGATAATGTTGATTCACAGCCATTGATATCAAAAC
ATCCAGAAACTACAGAACATCTAATAGCGACCCTTAAGGCAGAGAAAGAA
GAACTAGAATCATCACTCAGCAAGGAGAAGTTGCAGTCTATCCAACTAAA
GCAAGACTTAACAGAAGCCGAGAGTCAAAACACAGACCTGTACAAGGAAC
TCCAATCTGTTCGTGGTCAACTTGCTGCAGAGCAGTCAAGATGTTTCAAA
TTAGAGGTTGATGTTGCCGAACTAAGACAGAAGTTACAAACAATGGAGAC
ATTACAAAAGGAACTTGAACTCCTGCAGCGGCAAAAGGCTGCCTCTGAAC
AAGCAGCCTTTAATGCAAAGAGGCAGAGCTCAGGTGGCATGTGGGGGTTG
GCTTGCTGGAGCCCCCTCCTACCCAAATGCTTATGATGCTTAAACTTGTT
AGTCTCAATGAGTATCAATTGCTAGATTTGATTTCCATTNNATCAGTTTT
ATCATTTTGGTTCCAACAACCGGTTGTTTCCTTGATGGAAGGAAATTCTT
GGTGCCCAGATGAAAATCCAAGCGACGCAGGATCTTTTTTTTTTTTTTGG
GGGGGGAAA
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