EY756358

Overview
NameEY756358
Unique NameEY756358
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length894
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY756358 vs. ExPASy Swiss-Prot
Match: FER2_ARATH (Ferredoxin-2, chloroplastic OS=Arabidopsis thaliana GN=FD2 PE=1 SV=1)

HSP 1 Score: 192.2 bits (487), Expect = 3.386e-48
Identity = 92/124 (74.19%), Postives = 110/124 (88.71%), Query Frame = 3
Query:   18 SLKAMPNMG-QAMFGLKAN--RGGRVVAMATYKVKLITPGGEEEINCPDDTFILDAAEEAGLDLPYSCRAGACSSCTGKVVSGTVDQSEQSFLDDDQMGEGFVLTCAAYPTSDVTIETHKEEEL 380
            SL+++P+   Q++FGLK+   RGGRV AMATYKVK ITP GE E+ C DD ++LDAAEEAG+DLPYSCRAG+CSSC GKVVSG+VDQS+QSFLDD+Q+GEGFVLTCAAYPTSDVTIETHKEE++
Sbjct:   24 SLRSLPSANTQSLFGLKSGTARGGRVTAMATYKVKFITPEGELEVECDDDVYVLDAAEEAGIDLPYSCRAGSCSSCAGKVVSGSVDQSDQSFLDDEQIGEGFVLTCAAYPTSDVTIETHKEEDI 147          
BLAST of EY756358 vs. ExPASy Swiss-Prot
Match: FER1_ARATH (Ferredoxin-1, chloroplastic OS=Arabidopsis thaliana GN=FD1 PE=1 SV=1)

HSP 1 Score: 185.267 bits (469), Expect = 4.140e-46
Identity = 88/124 (70.97%), Postives = 107/124 (86.29%), Query Frame = 3
Query:   18 SLKAMPNMG-QAMFGLKAN--RGGRVVAMATYKVKLITPGGEEEINCPDDTFILDAAEEAGLDLPYSCRAGACSSCTGKVVSGTVDQSEQSFLDDDQMGEGFVLTCAAYPTSDVTIETHKEEEL 380
            SL+++P    Q++FGLK++  RGGRV AMATYKVK ITP GE+E+ C +D ++LDAAEEAGLDLPYSCRAG+CSSC GKVVSG++DQS+QSFLDD+QM EG+VLTC AYPTSDV IETHKEE +
Sbjct:   24 SLRSLPFANTQSLFGLKSSTARGGRVTAMATYKVKFITPEGEQEVECEEDVYVLDAAEEAGLDLPYSCRAGSCSSCAGKVVSGSIDQSDQSFLDDEQMSEGYVLTCVAYPTSDVVIETHKEEAI 147          
BLAST of EY756358 vs. ExPASy Swiss-Prot
Match: FER_CAPAN (Ferredoxin, chloroplastic OS=Capsicum annuum GN=AP1 PE=1 SV=1)

HSP 1 Score: 184.882 bits (468), Expect = 5.406e-46
Identity = 87/128 (67.97%), Postives = 105/128 (82.03%), Query Frame = 3
Query:    6 RPA-TSLKAMPNMGQAMFGLKANRGGRVVAMATYKVKLITPGGEEEINCPDDTFILDAAEEAGLDLPYSCRAGACSSCTGKVVSGTVDQSEQSFLDDDQMGEGFVLTCAAYPTSDVTIETHKEEELAG 386
            +PA TSLK +PN+G+A+FGLK+  GG+V  MA+YKVKLITP G  E +CPD+ +ILD AEEAG DLPYSCRAG+CSSC GK+  G VDQ++ +FLDDDQ+ EG+VLTC AYP SDVTIETHKE EL G
Sbjct:   17 KPAVTSLKPIPNVGEALFGLKSANGGKVTCMASYKVKLITPDGPIEFDCPDNVYILDQAEEAGHDLPYSCRAGSCSSCAGKIAGGAVDQTDGNFLDDDQLEEGWVLTCVAYPQSDVTIETHKEAELVG 144          
BLAST of EY756358 vs. ExPASy Swiss-Prot
Match: FER1_SOLLC (Ferredoxin-1, chloroplastic OS=Solanum lycopersicum GN=SEND33 PE=2 SV=1)

HSP 1 Score: 182.185 bits (461), Expect = 3.504e-45
Identity = 87/126 (69.05%), Postives = 102/126 (80.95%), Query Frame = 3
Query:    6 RPA-TSLKAMPNMGQAMFGLKANRGGRVVAMATYKVKLITPGGEEEINCPDDTFILDAAEEAGLDLPYSCRAGACSSCTGKVVSGTVDQSEQSFLDDDQMGEGFVLTCAAYPTSDVTIETHKEEEL 380
            +PA TSLKA+ N+G+A+FGLK+ R GR+  MA+YKVKLITP G  E  CPDD +ILD AEE G DLPYSCRAG+CSSC GKV +G+VDQS+ +FLD+DQ   GFVLTC AYP  DVTIETHKEEEL
Sbjct:   17 KPAVTSLKAISNVGEALFGLKSGRNGRITCMASYKVKLITPEGPIEFECPDDVYILDQAEEEGHDLPYSCRAGSCSSCAGKVTAGSVDQSDGNFLDEDQEAAGFVLTCVAYPKGDVTIETHKEEEL 142          
BLAST of EY756358 vs. ExPASy Swiss-Prot
Match: FER1_MESCR (Ferredoxin-1, chloroplastic OS=Mesembryanthemum crystallinum PE=2 SV=1)

HSP 1 Score: 179.104 bits (453), Expect = 2.967e-44
Identity = 88/128 (68.75%), Postives = 107/128 (83.59%), Query Frame = 3
Query:    3 TRPATSLKAMP-NMGQAMFGLKANRG-GRVVAMATYKVKLITPGGEEEINCPDDTFILDAAEEAGLDLPYSCRAGACSSCTGKVVSGTVDQSEQSFLDDDQMGEGFVLTCAAYPTSDVTIETHKEEEL 380
            T P T+  A+P N+G+A+FGLK++   GRV AMA YKV L+TP G++E+ CPDD +ILDAAEEAG+DLPYSCRAG+CSSC GKV SG+V+Q + SFLDDDQ+ EG+VLTC AYPT DVTIETHKEEEL
Sbjct:   21 TPPMTA--ALPTNVGRALFGLKSSASRGRVTAMAAYKVTLVTPEGKQELECPDDVYILDAAEEAGIDLPYSCRAGSCSSCAGKVTSGSVNQDDGSFLDDDQIKEGWVLTCVAYPTGDVTIETHKEEEL 146          
BLAST of EY756358 vs. ExPASy Swiss-Prot
Match: FER_SILPR (Ferredoxin, chloroplastic OS=Silene pratensis GN=PETF PE=2 SV=1)

HSP 1 Score: 177.178 bits (448), Expect = 1.127e-43
Identity = 86/126 (68.25%), Postives = 101/126 (80.16%), Query Frame = 3
Query:    6 RPATSLKAMPNMGQAMFGLKANRGGRVVAMATYKVKLITP-GGEEEINCPDDTFILDAAEEAGLDLPYSCRAGACSSCTGKVVSGTVDQSEQSFLDDDQMGEGFVLTCAAYPTSDVTIETHKEEEL 380
            +P  +     NMGQA+FGLKA   GRV AMATYKV LIT   G    +CPDD ++LD AEE G+DLPYSCRAG+CSSC GKVV+G+VDQS+QSFLDDDQ+  G+VLTCAAYP++DVTIETHKEEEL
Sbjct:   19 QPMVASSLPTNMGQALFGLKAGSRGRVTAMATYKVTLITKESGTVTFDCPDDVYVLDQAEEEGIDLPYSCRAGSCSSCAGKVVAGSVDQSDQSFLDDDQIEAGWVLTCAAYPSADVTIETHKEEEL 144          
BLAST of EY756358 vs. ExPASy Swiss-Prot
Match: FER_BRANA (Ferredoxin OS=Brassica napus PE=1 SV=1)

HSP 1 Score: 169.859 bits (429), Expect = 1.800e-41
Identity = 78/95 (82.11%), Postives = 87/95 (91.58%), Query Frame = 3
Query:   96 ATYKVKLITPGGEEEINCPDDTFILDAAEEAGLDLPYSCRAGACSSCTGKVVSGTVDQSEQSFLDDDQMGEGFVLTCAAYPTSDVTIETHKEEEL 380
            ATYKVK ITP GE+E+ C DD ++LDAAEEAG+DLPYSCRAG+CSSC GKVVSG VDQS++SFLDDDQ+ EGFVLTCAAYPTSDVTIETHKEEEL
Sbjct:    1 ATYKVKFITPEGEQEVECDDDVYVLDAAEEAGIDLPYSCRAGSCSSCAGKVVSGFVDQSDESFLDDDQIAEGFVLTCAAYPTSDVTIETHKEEEL 95          
BLAST of EY756358 vs. ExPASy Swiss-Prot
Match: FER3_RAPSA (Ferredoxin, leaf L-A OS=Raphanus sativus PE=1 SV=1)

HSP 1 Score: 169.088 bits (427), Expect = 3.070e-41
Identity = 76/95 (80.00%), Postives = 88/95 (92.63%), Query Frame = 3
Query:   96 ATYKVKLITPGGEEEINCPDDTFILDAAEEAGLDLPYSCRAGACSSCTGKVVSGTVDQSEQSFLDDDQMGEGFVLTCAAYPTSDVTIETHKEEEL 380
            ATYKVK ITP GE+E+ C DD ++LDAAEEAG+DLPYSCRAG+CSSC GKVVSG+VDQS+QSFLDDDQ+ EGFVLTCAAYPTSDVTIETH+EE++
Sbjct:    1 ATYKVKFITPEGEQEVECDDDVYVLDAAEEAGIDLPYSCRAGSCSSCAGKVVSGSVDQSDQSFLDDDQIAEGFVLTCAAYPTSDVTIETHREEDM 95          
BLAST of EY756358 vs. ExPASy Swiss-Prot
Match: FER1_SPIOL (Ferredoxin-1, chloroplastic OS=Spinacia oleracea GN=PETF PE=1 SV=2)

HSP 1 Score: 169.088 bits (427), Expect = 3.070e-41
Identity = 82/122 (67.21%), Postives = 101/122 (82.79%), Query Frame = 3
Query:   21 LKAMP-NMGQAMFGLKA-NRGGRVVAMATYKVKLITPGGEEEINCPDDTFILDAAEEAGLDLPYSCRAGACSSCTGKVVSGTVDQSEQSFLDDDQMGEGFVLTCAAYPTSDVTIETHKEEEL 380
            + A+P N G+++FGLK  +RGGR+  MA YKV L+TP G  E  CPDD +ILDAAEE G+DLPYSCRAG+CSSC GK+ +G+++Q +QSFLDDDQ+ EG+VLTCAAYP SDVTIETHKEEEL
Sbjct:   25 MAALPSNTGRSLFGLKTGSRGGRMT-MAAYKVTLVTPTGNVEFQCPDDVYILDAAEEEGIDLPYSCRAGSCSSCAGKLKTGSLNQDDQSFLDDDQIDEGWVLTCAAYPVSDVTIETHKEEEL 145          
BLAST of EY756358 vs. ExPASy Swiss-Prot
Match: FER1_MAIZE (Ferredoxin-1, chloroplastic OS=Zea mays GN=FDX1 PE=1 SV=1)

HSP 1 Score: 166.392 bits (420), Expect = 1.990e-40
Identity = 81/126 (64.29%), Postives = 96/126 (76.19%), Query Frame = 3
Query:    9 PATSLKAMPNMGQAMFGLKANRGGRVVAMATYKVKLITPGGEEEINCPDDTFILDAAEEAGLDLPYSCRAGACSSCTGKVVSGTVDQSEQSFLDDDQMGEGFVLTCAAYPTSDVTIETHKEEELAG 386
            PA +  A+P     + G  A+   R+ A ATY VKLITP GE E+  PDD +ILD AEE G+DLPYSCRAG+CSSC GKVVSG+VDQS+QS+LDD Q+ +G+VLTC AYPTSDV IETHKEEEL G
Sbjct:   24 PAPTAVALPAAKVGIMGRSASSRRRLRAQATYNVKLITPEGEVELQVPDDVYILDQAEEDGIDLPYSCRAGSCSSCAGKVVSGSVDQSDQSYLDDGQIADGWVLTCHAYPTSDVVIETHKEEELTG 149          
The following BLAST results are available for this feature:
BLAST of EY756358 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 110
Match NameE-valueIdentityDescription
FER2_ARATH3.386e-4874.19Ferredoxin-2, chloroplastic OS=Arabidopsis thalian... [more]
FER1_ARATH4.140e-4670.97Ferredoxin-1, chloroplastic OS=Arabidopsis thalian... [more]
FER_CAPAN5.406e-4667.97Ferredoxin, chloroplastic OS=Capsicum annuum GN=AP... [more]
FER1_SOLLC3.504e-4569.05Ferredoxin-1, chloroplastic OS=Solanum lycopersicu... [more]
FER1_MESCR2.967e-4468.75Ferredoxin-1, chloroplastic OS=Mesembryanthemum cr... [more]
FER_SILPR1.127e-4368.25Ferredoxin, chloroplastic OS=Silene pratensis GN=P... [more]
FER_BRANA1.800e-4182.11Ferredoxin OS=Brassica napus PE=1 SV=1[more]
FER3_RAPSA3.070e-4180.00Ferredoxin, leaf L-A OS=Raphanus sativus PE=1 SV=1[more]
FER1_SPIOL3.070e-4167.21Ferredoxin-1, chloroplastic OS=Spinacia oleracea G... [more]
FER1_MAIZE1.990e-4064.29Ferredoxin-1, chloroplastic OS=Zea mays GN=FDX1 PE... [more]

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Properties
Property NameValue
Genbank descriptionCS13-C1-001-007-F12-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY756358 ID=EY756358; Name=EY756358; organism=Citrus sinensis; type=EST; length=894bp
CCACGCGTCCGGCGACCAGCCTCAAAGCCATGCCTAACATGGGTCAGGCT
ATGTTTGGCCTCAAAGCCAACAGAGGTGGCCGTGTTGTAGCCATGGCTAC
ATACAAAGTCAAGCTCATTACACCTGGGGGAGAGGAAGAAATCAACTGTC
CTGATGACACGTTTATTCTTGATGCTGCTGAAGAAGCTGGGCTTGATCTT
CCGTACTCATGCAGGGCTGGGGCTTGCTCTTCCTGTACTGGGAAAGTTGT
GTCTGGAACCGTTGACCAGTCGGAGCAAAGCTTTCTGGATGATGATCAAA
TGGGAGAAGGTTTTGTTCTCACTTGTGCTGCTTATCCAACAAGTGATGTT
ACTATAGAGACTCACAAGGAAGAGGAGCTCGCTGGTTAATAATGTGCTCT
TGATATCTCATTATTATCTTCTCTTTTATGGGGTGGGTTTTGTCTGATTA
TTTTAATGCTTTGAAAGGGATATTGAGTAATTTGAGAATGATTCTTGTAA
TGTGTTTTTATTTCTTGTTGCAAAGAAGTTGTAATTGCACCGGCCATGAA
TGCGCATCGTACCTCAAAGGGTGAGGTTTCTCATCCCATCCCAACATGGT
ACCGTTCTATAATTANGAAGCAAGCAAGAACATGGGATCTTTCGGTGGAT
TTCATCGGAATTTTCAAACAAGTGGGATTGATTTGTCCNNNCCCACCNAA
GACGCGGGAAAACATTCCCCTTCTCNNNAAGGGGGGGCCGGCTCTGAGGA
TCCAGCTTACTTACGGGGGATGGCAAGCCTAATCTCTTTAAAGGGGCCCT
AAATTAATTCCTGGGCGGGGTTTAAACCGCGGGGATGGGAAAACCTGGGG
TACCCAATTTATGCCCTGGAAAAACCCCCTTTTCCCCTGGGAAA
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