EY732281
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of EY732281 vs. ExPASy Swiss-Prot
Match: TTC4_DICDI (Tetratricopeptide repeat protein 4 homolog OS=Dictyostelium discoideum GN=ttc4 PE=3 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 1.587e-20 Identity = 71/238 (29.83%), Postives = 103/238 (43.28%), Query Frame = 3 Query: 24 CEKGLEQDPDNKELKKLAVEI-----DSRKREQEAREAQVSKAVGEAKNLLSAIEDRGLKIGKATFQ----ELTGLRKPFLDKNNILHWPVLLLYAEVMSSDFIEDFCETDMFAAHLDMMYSESCPPLA-WDKEHSYTREAIELYYEAVSGVSLSKTKLLRYFLEGTAGANVESISEEEKDGTHGSTYDYSAGQGSSRWVKVNEKRKLHDVLKEPNFIIPGTPVFYVVSKTSSFYKEF 707 C+ GL +P NK+L + D +KREQ+ + + + E K+G F RK +D+NN +H+PV+ LY E SDFI DF E F HL MM+ P A WD + YT + IE+Y+E T + L I E EK +W++V + V+ P +IIP P+FY+VS+ + FYK+F Sbjct: 187 CDLGLSHEPTNKDLSTIRENANKKLQDIKKREQDKIDKENQLKQQQQLLATKLYEKNKYKLGHQIFDMSQYTYQSDRKVTIDQNNDVHFPVVFLYPEFGKSDFIMDFQEDHTFGDHLQMMFPPENPEFAPWDTKKEYTMDRIEVYFE---------TNWTKPILSDI------KIKEIEK-----------------KWIRVKHTTDIAKVISHPTYIIPEIPIFYIVSRGNLFYKKF 392
BLAST of EY732281 vs. ExPASy Swiss-Prot
Match: TTC4_MOUSE (Tetratricopeptide repeat protein 4 OS=Mus musculus GN=Ttc4 PE=2 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 4.186e-13 Identity = 54/165 (32.73%), Postives = 84/165 (50.91%), Query Frame = 3 Query: 12 AKSFCEKGLEQDPDNKELKKLAVEIDSRKR--EQEAREAQVSKAVGEAKN--LLSAIEDRGLKIGKATFQE-------------LTGL--RKPF-----LDKNNILHWPVLLLYAEVMSSDFIEDFCETDMFAAHLDMMYSESCPPLAWDKEHSYTREAIELYYE 434 A ++C++GL+ D K+L ++ + D KR E++ R+A++ + + +N LL AI+ R +++ + E L GL P+ +D L WPVL LY E SDFI F E F HL M+SE+ +WD EH Y E +E+Y+E Sbjct: 170 AVNWCDEGLQIDAKEKKLLEIRAKADKLKRMEERDLRKAKLKEKKEQHQNEALLQAIKARNIRLVSESAGEDEDSASNGPAEILLDGLSSENPYGARLSIDDQGRLSWPVLFLYPEYAQSDFISAFHEDTRFIDHLMAMFSEA---PSWDSEHKYHPENLEVYFE 331
BLAST of EY732281 vs. ExPASy Swiss-Prot
Match: TTC4_HUMAN (Tetratricopeptide repeat protein 4 OS=Homo sapiens GN=TTC4 PE=1 SV=3) HSP 1 Score: 72.0182 bits (175), Expect = 4.628e-12 Identity = 58/197 (29.44%), Postives = 94/197 (47.72%), Query Frame = 3 Query: 12 AKSFCEKGLEQDPDNKELKKLAVEIDSRKR--EQEAREAQVSKAVGEAKN--LLSAIEDRGLKIGKATFQE------------LTGLR-------KPFLDKNNILHWPVLLLYAEVMSSDFIEDFCETDMFAAHLDMMYSESCPPLAWDKEHSYTREAIELYYEAVSGVSL----SKTKLL------RYFLEGTAGA 503 A ++C++GL+ D K+L ++ + D KR +++ R+A + + +N LL AI+ R +++ +A ++ L GL + LD L WPVL LY E SDFI F E F HL +M+ E+ +WD E Y + +E+Y+E L +K+ LL RYF++ A Sbjct: 170 AVNWCDEGLQIDAKEKKLLEMRAKADKLKRIEQRDVRKANLKEKKERNQNEALLQAIKARNIRLSEAACEDEDSASEGLGELFLDGLSTENPHGARLSLDGQGRLSWPVLFLYPEYAQSDFISAFHEDSRFIDHLMVMFGET---PSWDLEQKYCPDNLEVYFEDEDRAELYRVPAKSTLLQVLQHQRYFVKALTPA 363 The following BLAST results are available for this feature:
BLAST of EY732281 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 3
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >EY732281 ID=EY732281; Name=EY732281; organism=Citrus sinensis; type=EST; length=844bpback to top |