EY756356

Overview
NameEY756356
Unique NameEY756356
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length884
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY756356 vs. ExPASy Swiss-Prot
Match: FBK17_ARATH (F-box/kelch-repeat protein At1g30090 OS=Arabidopsis thaliana GN=At1g30090 PE=2 SV=1)

HSP 1 Score: 291.967 bits (746), Expect = 3.088e-78
Identity = 147/222 (66.22%), Postives = 168/222 (75.68%), Query Frame = 1
Query:   82 MQRVRLSSQQAPVHKLGDSQMTLSPKFRLAV-IQSSLLNPSPELEASLRAEPFIPGLPDDVALNCLLRLPVESHAACRAVCKRWHLLLGNKERFFTRRKELGFKDPWLFVFAFHKCTGKIQWQVLDLTHYCWHTIPAMPCKDKVCPHGFXCVSIPCEGTLFVCGSMGSDVDCPLDLVLKYE-CKKTLDSHEQMITA-DLFCXWVNWGDNYLGGRNNANFFRL 738
            MQRVR+SSQ+A VHKLGDSQMTLSPKFR+A  IQS+L + S ELE SLR EP IPGLPDDVALNCLLR+PV+SH + ++VCKRWHLL G KE FF +RKE GFKDPWLFV  F +CTGKIQW+VLDL +  WH IPAMPC+DKVCPHGF  VS+P EGT+FVCG M SD DCPLDLVLKY+  K       +MITA   F   V  G  Y  G N A+ + L
Sbjct:    1 MQRVRVSSQRAVVHKLGDSQMTLSPKFRVAASIQSTLFDRSSELELSLRGEPLIPGLPDDVALNCLLRVPVQSHVSSKSVCKRWHLLFGTKETFFAKRKEFGFKDPWLFVVGFSRCTGKIQWKVLDLRNLTWHEIPAMPCRDKVCPHGFRSVSMPREGTMFVCGGMVSDSDCPLDLVLKYDMVKNHWTVTNKMITARSFFASGVIDGMIYAAGGNAADLYEL 222          
BLAST of EY756356 vs. ExPASy Swiss-Prot
Match: AFR_ARATH (F-box protein AFR OS=Arabidopsis thaliana GN=AFR PE=1 SV=2)

HSP 1 Score: 107.071 bits (266), Expect = 1.409e-22
Identity = 59/136 (43.38%), Postives = 78/136 (57.35%), Query Frame = 1
Query:  190 LNPSPELEASLRAEPFIPGLPDDVALNCLLRLPVESHAACRAVCKRWHLLLGNKERFFTRRKELGFKDPWLFVFAFHKCTGKIQWQVLDLTHYCWHTIPAMPCK-DKV-CPHGFXCVSIPCEGTLFVCGSMGSDVD 591
            +N   E E   +++P I GLP+D+A  CLLRLP   HA  R+V   W+  + N  RF   ++ L    P+LFVFAF+K T +IQWQ LDL    W  +P MP    K+  PH   C S+P +G LFV G  G DV+
Sbjct:   13 INDQAEEETRTKSQPLISGLPNDIAELCLLRLPYPYHALYRSVSSSWNKTITNP-RFLFSKQSLSISSPYLFVFAFNKSTARIQWQSLDLASGRWFVLPPMPNSFTKISSPHALSCASMPRQGKLFVLG--GGDVN 145          
BLAST of EY756356 vs. ExPASy Swiss-Prot
Match: FBK22_ARATH (F-box/kelch-repeat protein At1g55270 OS=Arabidopsis thaliana GN=At1g55270 PE=2 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 4.109e-14
Identity = 36/88 (40.91%), Postives = 52/88 (59.09%), Query Frame = 1
Query:  232 PFIPGLPDDVALNCLLRLPVESHAACRAVCKRWHLLLGNKERFFTRRKELGFKDPWLFVFAFHKCTGKIQWQVLDLTHYCWHTIPAMP 495
            P +PGLPDD+A+ CL+R+P   H   R VCKRW+  L +   F+++RK LG  + W++VF   +  GKI W   D     W  +P +P
Sbjct:   77 PLLPGLPDDLAVACLIRVPRAEHRKLRLVCKRWY-RLASGNFFYSQRKLLGMSEEWVYVFKRDR-DGKISWNTFDPISQLWQPLPPVP 162          
The following BLAST results are available for this feature:
BLAST of EY756356 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 3
Match NameE-valueIdentityDescription
FBK17_ARATH3.088e-7866.22F-box/kelch-repeat protein At1g30090 OS=Arabidopsi... [more]
AFR_ARATH1.409e-2243.38F-box protein AFR OS=Arabidopsis thaliana GN=AFR P... [more]
FBK22_ARATH4.109e-1440.91F-box/kelch-repeat protein At1g55270 OS=Arabidopsi... [more]
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Properties
Property NameValue
Genbank descriptionCS13-C1-001-007-F10-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY756356 ID=EY756356; Name=EY756356; organism=Citrus sinensis; type=EST; length=884bp
CCACGCGTCCGAATCTGAGTGTGGAACAAGTCCTTCGTGATATTATAGGT
TCTTAAAATATTGAGTCTTAAGACAATTAAAATGCAAAGGGTTCGATTAT
CGTCACAACAAGCGCCTGTACATAAGCTAGGGGATTCCCAGATGACGTTA
TCCCCAAAGTTTAGGTTAGCTGTGATACAATCTTCCTTGTTAAATCCTTC
ACCTGAATTAGAAGCATCTCTCAGAGCAGAACCATTCATTCCGGGCCTTC
CTGATGATGTTGCACTCAATTGTCTCCTCCGGCTTCCAGTTGAGAGCCAT
GCAGCCTGCAGAGCTGTTTGCAAGAGATGGCACCTGCTTCTTGGTAATAA
AGAGCGTTTTTTTACCCGAAGAAAGGAACTGGGTTTCAAGGACCCTTGGC
TCTTTGTTTTTGCCTTTCACAAGTGTACTGGAAAAATTCAGTGGCAGGTT
CTAGACCTTACCCACTATTGTTGGCACACTATCCCCGCAATGCCGTGCAA
GGATAAGGTTTGTCCACATGGATTTANGTGTGTTTCAATCCCTTGTGAGG
GTACTTTGTTTGTGTGTGGGAGTATGGGCTCTGATGTTGATTGTCCTCTT
GACTTGGTCTTGAAGTATGAATGCAAAAAAACGTTGGACAGTCATGAACA
GATGATTACAGCAGATCTTTTTTGCTANTGGGTGAATTGGGGGGATAATT
ATTTGGGTGGGAGGAACAATGCAAACTTTTTCAGGTTGACTCGCTGAGGT
TTAAAACCTGGAAAGGGAATTGGGGCCCATTGCAGCATGGAACAACATGG
CATCTATGATGGTTGATTCTAAAGGGAACTTCTGGGAGGAAAGGTGGTGG
GGGCTTTTTTGTGTCTCCAAAGGCAGGCTATGAT
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