EY732275

Overview
NameEY732275
Unique NameEY732275
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length623
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY732275 vs. ExPASy Swiss-Prot
Match: ARD4_ARATH (1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase 4 OS=Arabidopsis thaliana GN=ARD4 PE=2 SV=1)

HSP 1 Score: 219.55 bits (558), Expect = 1.057e-56
Identity = 99/122 (81.15%), Postives = 110/122 (90.16%), Query Frame = 3
Query:  150 DLLDLCPEKVTNYEEKLKNFYTEHIHADEEIRYCLEGSGYFDVRDESDQWIRIWIKAGDLIVLPAGIYHRFTLDTSNYVKLMRLFVGEPVWTAYNRPQEDHPARKEYIKGLTGQAGVPVEAH 515
            DLLDLCPEKV+NYEEKLKNF+TEHIH DEEIRYCL GSGYFDVRD+ D+WIRIW++ GDLIVLPAGIYHRFTLD SNY+KLMRLFVGEPVWT YNRPQE+HP RK+YI GLT + G  V+AH
Sbjct:   66 DLLDLCPEKVSNYEEKLKNFFTEHIHKDEEIRYCLAGSGYFDVRDKDDRWIRIWMQPGDLIVLPAGIYHRFTLDASNYIKLMRLFVGEPVWTPYNRPQEEHPVRKKYIHGLTYKFGETVKAH 187          
BLAST of EY732275 vs. ExPASy Swiss-Prot
Match: ARD4_ORYSJ (1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase 4 OS=Oryza sativa subsp. japonica GN=ARD4 PE=2 SV=1)

HSP 1 Score: 213.001 bits (541), Expect = 9.895e-55
Identity = 90/123 (73.17%), Postives = 109/123 (88.62%), Query Frame = 3
Query:  147 WDLLDLCPEKVTNYEEKLKNFYTEHIHADEEIRYCLEGSGYFDVRDESDQWIRIWIKAGDLIVLPAGIYHRFTLDTSNYVKLMRLFVGEPVWTAYNRPQEDHPARKEYIKGLTGQAGVPVEAH 515
            +DL ++CP+K+ NYEEKLK+FY EHIHADEEIRYCLEGSGYFDVRD+ D+WIRIWIK GD+I+LPAGIYHRF +D++NY+KLMRLF+GEPVWTAYNRPQEDHP R+EY+K + G  G  + AH
Sbjct:   62 FDLTEICPDKLENYEEKLKSFYCEHIHADEEIRYCLEGSGYFDVRDKDDKWIRIWIKEGDMIILPAGIYHRFIVDSNNYIKLMRLFIGEPVWTAYNRPQEDHPVRQEYVKNVKGDTGFALAAH 184          
BLAST of EY732275 vs. ExPASy Swiss-Prot
Match: ARD2_ORYSJ (1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase 2 OS=Oryza sativa subsp. japonica GN=ARD2 PE=2 SV=1)

HSP 1 Score: 187.578 bits (475), Expect = 4.452e-47
Identity = 80/116 (68.97%), Postives = 98/116 (84.48%), Query Frame = 3
Query:  150 DLLDLCPEKVTNYEEKLKNFYTEHIHADEEIRYCLEGSGYFDVRDESDQWIRIWIKAGDLIVLPAGIYHRFTLDTSNYVKLMRLFVGEPVWTAYNRPQEDHPARKEYIKGLTGQAG 497
            D+ D+CPEK+ NYE KLKNF+ EH+H DEEIRYCLEGSGYFDVRD++DQWIR+ +K G +IVLPAG+YHRFTLD+ NY+K MRLFVGEPVWT YNRP +  PARKEY++ +  + G
Sbjct:   76 DICDVCPEKLPNYEAKLKNFFEEHLHTDEEIRYCLEGSGYFDVRDQNDQWIRVAVKKGGMIVLPAGMYHRFTLDSDNYIKAMRLFVGEPVWTPYNRPHDHLPARKEYVEKIINRGG 191          
BLAST of EY732275 vs. ExPASy Swiss-Prot
Match: ARD2_ORYSI (1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase 2 OS=Oryza sativa subsp. indica GN=ARD2 PE=2 SV=2)

HSP 1 Score: 187.578 bits (475), Expect = 4.452e-47
Identity = 80/116 (68.97%), Postives = 98/116 (84.48%), Query Frame = 3
Query:  150 DLLDLCPEKVTNYEEKLKNFYTEHIHADEEIRYCLEGSGYFDVRDESDQWIRIWIKAGDLIVLPAGIYHRFTLDTSNYVKLMRLFVGEPVWTAYNRPQEDHPARKEYIKGLTGQAG 497
            D+ D+CPEK+ NYE KLKNF+ EH+H DEEIRYCLEGSGYFDVRD++DQWIR+ +K G +IVLPAG+YHRFTLD+ NY+K MRLFVGEPVWT YNRP +  PARKEY++ +  + G
Sbjct:   76 DICDVCPEKLPNYEAKLKNFFEEHLHTDEEIRYCLEGSGYFDVRDQNDQWIRVAVKKGGMIVLPAGMYHRFTLDSDNYIKAMRLFVGEPVWTPYNRPHDHLPARKEYVEKIINRGG 191          
BLAST of EY732275 vs. ExPASy Swiss-Prot
Match: ARD1_ORYSJ (1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase 1 OS=Oryza sativa subsp. japonica GN=ARD1 PE=2 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 2.443e-45
Identity = 79/116 (68.10%), Postives = 96/116 (82.76%), Query Frame = 3
Query:  150 DLLDLCPEKVTNYEEKLKNFYTEHIHADEEIRYCLEGSGYFDVRDESDQWIRIWIKAGDLIVLPAGIYHRFTLDTSNYVKLMRLFVGEPVWTAYNRPQEDHPARKEYIKGLTGQAG 497
            D+ D+CPEK+ NYE K+K+F+ EH+H DEEIRYCLEGSGYFDVRD++DQWIRI +K G +IVLPAG+YHRFTLDT NY+K MRLFVG+PVWT YNRP +  PARKE++  L    G
Sbjct:   76 DICDVCPEKLPNYETKIKSFFEEHLHTDEEIRYCLEGSGYFDVRDQNDQWIRIALKKGGMIVLPAGMYHRFTLDTDNYIKAMRLFVGDPVWTPYNRPHDHLPARKEFLAKLLKSEG 191          
BLAST of EY732275 vs. ExPASy Swiss-Prot
Match: ARD1_ORYSI (1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase 1 OS=Oryza sativa subsp. indica GN=ARD1 PE=1 SV=2)

HSP 1 Score: 181.8 bits (460), Expect = 2.443e-45
Identity = 79/116 (68.10%), Postives = 96/116 (82.76%), Query Frame = 3
Query:  150 DLLDLCPEKVTNYEEKLKNFYTEHIHADEEIRYCLEGSGYFDVRDESDQWIRIWIKAGDLIVLPAGIYHRFTLDTSNYVKLMRLFVGEPVWTAYNRPQEDHPARKEYIKGLTGQAG 497
            D+ D+CPEK+ NYE K+K+F+ EH+H DEEIRYCLEGSGYFDVRD++DQWIRI +K G +IVLPAG+YHRFTLDT NY+K MRLFVG+PVWT YNRP +  PARKE++  L    G
Sbjct:   76 DICDVCPEKLPNYETKIKSFFEEHLHTDEEIRYCLEGSGYFDVRDQNDQWIRIALKKGGMIVLPAGMYHRFTLDTDNYIKAMRLFVGDPVWTPYNRPHDHLPARKEFLAKLLKSEG 191          
BLAST of EY732275 vs. ExPASy Swiss-Prot
Match: ARD3_ARATH (1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase 3 OS=Arabidopsis thaliana GN=ARD3 PE=2 SV=1)

HSP 1 Score: 176.792 bits (447), Expect = 7.859e-44
Identity = 74/108 (68.52%), Postives = 91/108 (84.26%), Query Frame = 3
Query:  150 DLLDLCPEKVTNYEEKLKNFYTEHIHADEEIRYCLEGSGYFDVRDESDQWIRIWIKAGDLIVLPAGIYHRFTLDTSNYVKLMRLFVGEPVWTAYNRPQEDHPARKEYI 473
            D  ++CPEK+ NYE K+K+F+ EH+H DEEIRYC+ GSGYFDVRD ++ WIR+W+K G +IVLPAGIYHRFT+D+ NY+K MRLFVGEPVWT YNRP +  PARKEYI
Sbjct:   76 DFCEVCPEKLPNYEVKVKSFFEEHLHTDEEIRYCVAGSGYFDVRDRNEAWIRVWVKKGGMIVLPAGIYHRFTVDSDNYIKAMRLFVGEPVWTPYNRPHDHLPARKEYI 183          
BLAST of EY732275 vs. ExPASy Swiss-Prot
Match: ARD1_ARATH (1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase 1 OS=Arabidopsis thaliana GN=ARD1 PE=2 SV=1)

HSP 1 Score: 176.407 bits (446), Expect = 1.026e-43
Identity = 77/109 (70.64%), Postives = 91/109 (83.49%), Query Frame = 3
Query:  150 DLLDLCPEKVTNYEEKLKNFYTEHIHADEEIRYCLEGSGYFDVRDESDQWIRIWIKAGDLIVLPAGIYHRFTLDTSNYVKLMRLFVGEPVWTAYNRPQEDHPARKEYIK 476
            DL ++CPEK+ NYEEK+K F+ EH+H DEEIRYCL GSGYFDVRD +D WIR+W+K G LIV PAGIYHRFT+D+ NY+K MRLFVG PVWTAYNRP +  PARK Y+K
Sbjct:   76 DLCEVCPEKLPNYEEKVKMFFEEHLHIDEEIRYCLAGSGYFDVRDLNDIWIRVWVKKGGLIVFPAGIYHRFTVDSDNYMKAMRLFVGGPVWTAYNRPHDHLPARKAYMK 184          
BLAST of EY732275 vs. ExPASy Swiss-Prot
Match: MTND_CHICK (1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase OS=Gallus gallus GN=ADI1 PE=2 SV=1)

HSP 1 Score: 173.711 bits (439), Expect = 6.653e-43
Identity = 77/115 (66.96%), Postives = 96/115 (83.48%), Query Frame = 3
Query:  150 DLLDLCPEKVTNYEEKLKNFYTEHIHADEEIRYCLEGSGYFDVRDESDQWIRIWIKAGDLIVLPAGIYHRFTLDTSNYVKLMRLFVGEPVWTAYNRPQEDHPARKEYIKGLTGQA 494
            D++ +  +K+ NYEEK+K FY EH+H D+EIRY L+GSGYFDVRD+ D+WIRI ++ GD+I LPAGIYHRFTLD +NYVK MRLFVGEPVWTAYNRP +D PARK+Y+K L  +A
Sbjct:   65 DIVTIHKDKLPNYEEKIKTFYEEHLHLDDEIRYILDGSGYFDVRDKDDKWIRISMEKGDMITLPAGIYHRFTLDENNYVKAMRLFVGEPVWTAYNRPADDFPARKQYMKFLAEEA 179          
BLAST of EY732275 vs. ExPASy Swiss-Prot
Match: ARD2_ARATH (1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase 2 OS=Arabidopsis thaliana GN=ARD2 PE=2 SV=1)

HSP 1 Score: 170.244 bits (430), Expect = 7.355e-42
Identity = 71/108 (65.74%), Postives = 90/108 (83.33%), Query Frame = 3
Query:  150 DLLDLCPEKVTNYEEKLKNFYTEHIHADEEIRYCLEGSGYFDVRDESDQWIRIWIKAGDLIVLPAGIYHRFTLDTSNYVKLMRLFVGEPVWTAYNRPQEDHPARKEYI 473
            D  ++CPEK+ NYE K+K+F+ EH+H DEEIRYC+ G+GYFDVRD ++ WIR+ +K G +IVLPAGIYHRFT+D+ NY+K MRLFVGEPVWT YNRP +  PARKEY+
Sbjct:   76 DFCEVCPEKLPNYEVKVKSFFEEHLHTDEEIRYCVAGTGYFDVRDRNEAWIRVLVKKGGMIVLPAGIYHRFTVDSDNYIKAMRLFVGEPVWTPYNRPHDHLPARKEYV 183          
The following BLAST results are available for this feature:
BLAST of EY732275 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 24
Match NameE-valueIdentityDescription
ARD4_ARATH1.057e-5681.151,2-dihydroxy-3-keto-5-methylthiopentene dioxygena... [more]
ARD4_ORYSJ9.895e-5573.171,2-dihydroxy-3-keto-5-methylthiopentene dioxygena... [more]
ARD2_ORYSJ4.452e-4768.971,2-dihydroxy-3-keto-5-methylthiopentene dioxygena... [more]
ARD2_ORYSI4.452e-4768.971,2-dihydroxy-3-keto-5-methylthiopentene dioxygena... [more]
ARD1_ORYSJ2.443e-4568.101,2-dihydroxy-3-keto-5-methylthiopentene dioxygena... [more]
ARD1_ORYSI2.443e-4568.101,2-dihydroxy-3-keto-5-methylthiopentene dioxygena... [more]
ARD3_ARATH7.859e-4468.521,2-dihydroxy-3-keto-5-methylthiopentene dioxygena... [more]
ARD1_ARATH1.026e-4370.641,2-dihydroxy-3-keto-5-methylthiopentene dioxygena... [more]
MTND_CHICK6.653e-4366.961,2-dihydroxy-3-keto-5-methylthiopentene dioxygena... [more]
ARD2_ARATH7.355e-4265.741,2-dihydroxy-3-keto-5-methylthiopentene dioxygena... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C3-704-059-D09-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY732275 ID=EY732275; Name=EY732275; organism=Citrus sinensis; type=EST; length=623bp
CCACGCGTCCGCATTTTTGCTTTATTATTTTCTAATTTTTCCATTCATAC
AAGGCTCTATTGGGTGCCGTGGGTTGGCTTGAAGGTCACGGCTGCTGTGA
ATGAGAGCTTAGCCCATGAGGAGTATAATTGTCTTTTTGATAAAATTGGG
ATTTGCTTGATTTATGTCCGGAGAAAGTGACTAACTATGAGGAGAAGCTG
AAGAACTTTTACACGGAGCACATCCATGCCGACGAAGAGATACGCTACTG
TTTGGAAGGAAGTGGATATTTTGATGTTAGAGACGAGAGTGATCAGTGGA
TTCGAATCTGGATCAAAGCGGGTGATCTAATCGTTCTGCCAGCTGGAATC
TACCATCGTTTCACTCTTGACACTAGTAACTATGTTAAGTTGATGAGGTT
GTTTGTGGGAGAACCAGTGTGGACGGCATATAATCGGCCACAGGAGGATC
ATCCTGCCAGAAAGGAGTACATCAAAGGTTTGACTGGGCAGGCAGGGGTG
CCAGTTGAAGCTCATTAGAGTTTGAGAGTACTTTACCATTTACACTTGTG
TATGTGTATGTTAATGTAACTATATTTATATAGACTTCTGATAAACCACA
TTTAGCTAAAAAAAAAAAAAAAA
back to top