EY756345

Overview
NameEY756345
Unique NameEY756345
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length509
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1118 contig Csv1_Contig1118:579..1087. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY756345 vs. ExPASy Swiss-Prot
Match: SC61A_DICDI (Protein transport protein Sec61 subunit alpha OS=Dictyostelium discoideum GN=sec61a PE=3 SV=1)

HSP 1 Score: 184.111 bits (466), Expect = 3.148e-46
Identity = 92/118 (77.97%), Postives = 102/118 (86.44%), Query Frame = 1
Query:   16 ANPFHALFYLVFMLTACALFSKTWIEVSGSSARDVAKQLKEQQMVMPGHTYSNLQKELNRNIPTAAAFGGVCIGALTVLDDFMGAIGSGTGILLAVTIIYQYFETFEKERASELGFFG 369
            A+PFHALFY+ FMLT+CALFSK WIEVSGSSARDVAKQLK+QQM M GH  +++ KELNR IPTAAAFGG+CIGALTV+ DFMGAIGSGTGILLAVTIIYQYFETF KE+    G  G
Sbjct:  355 ADPFHALFYITFMLTSCALFSKVWIEVSGSSARDVAKQLKDQQMTMKGHRDTSVIKELNRYIPTAAAFGGLCIGALTVVADFMGAIGSGTGILLAVTIIYQYFETFVKEQQELSGGIG 472          
BLAST of EY756345 vs. ExPASy Swiss-Prot
Match: S61A1_RAT (Protein transport protein Sec61 subunit alpha isoform 1 OS=Rattus norvegicus GN=Sec61a1 PE=2 SV=2)

HSP 1 Score: 173.326 bits (438), Expect = 5.556e-43
Identity = 88/117 (75.21%), Postives = 101/117 (86.32%), Query Frame = 1
Query:   19 NPFHALFYLVFMLTACALFSKTWIEVSGSSARDVAKQLKEQQMVMPGHTYSNLQKELNRNIPTAAAFGGVCIGALTVLDDFMGAIGSGTGILLAVTIIYQYFETFEKERASELGFFG 369
            +P HA+ Y+VFML +CA FSKTWIEVSGSSA+DVAKQLKEQQMVM GH  +++  ELNR IPTAAAFGG+CIGAL+VL DF+GAIGSGTGILLAVTIIYQYFE F KE+ SE+G  G
Sbjct:  357 DPVHAVVYIVFMLGSCAFFSKTWIEVSGSSAKDVAKQLKEQQMVMRGHRETSMVHELNRYIPTAAAFGGLCIGALSVLADFLGAIGSGTGILLAVTIIYQYFEIFVKEQ-SEVGSMG 472          
BLAST of EY756345 vs. ExPASy Swiss-Prot
Match: S61A1_PONAB (Protein transport protein Sec61 subunit alpha isoform 1 OS=Pongo abelii GN=SEC61A1 PE=2 SV=3)

HSP 1 Score: 173.326 bits (438), Expect = 5.556e-43
Identity = 88/117 (75.21%), Postives = 101/117 (86.32%), Query Frame = 1
Query:   19 NPFHALFYLVFMLTACALFSKTWIEVSGSSARDVAKQLKEQQMVMPGHTYSNLQKELNRNIPTAAAFGGVCIGALTVLDDFMGAIGSGTGILLAVTIIYQYFETFEKERASELGFFG 369
            +P HA+ Y+VFML +CA FSKTWIEVSGSSA+DVAKQLKEQQMVM GH  +++  ELNR IPTAAAFGG+CIGAL+VL DF+GAIGSGTGILLAVTIIYQYFE F KE+ SE+G  G
Sbjct:  357 DPVHAVVYIVFMLGSCAFFSKTWIEVSGSSAKDVAKQLKEQQMVMRGHRETSMVHELNRYIPTAAAFGGLCIGALSVLADFLGAIGSGTGILLAVTIIYQYFEIFVKEQ-SEVGSMG 472          
BLAST of EY756345 vs. ExPASy Swiss-Prot
Match: S61A1_MOUSE (Protein transport protein Sec61 subunit alpha isoform 1 OS=Mus musculus GN=Sec61a1 PE=2 SV=2)

HSP 1 Score: 173.326 bits (438), Expect = 5.556e-43
Identity = 88/117 (75.21%), Postives = 101/117 (86.32%), Query Frame = 1
Query:   19 NPFHALFYLVFMLTACALFSKTWIEVSGSSARDVAKQLKEQQMVMPGHTYSNLQKELNRNIPTAAAFGGVCIGALTVLDDFMGAIGSGTGILLAVTIIYQYFETFEKERASELGFFG 369
            +P HA+ Y+VFML +CA FSKTWIEVSGSSA+DVAKQLKEQQMVM GH  +++  ELNR IPTAAAFGG+CIGAL+VL DF+GAIGSGTGILLAVTIIYQYFE F KE+ SE+G  G
Sbjct:  357 DPVHAVVYIVFMLGSCAFFSKTWIEVSGSSAKDVAKQLKEQQMVMRGHRETSMVHELNRYIPTAAAFGGLCIGALSVLADFLGAIGSGTGILLAVTIIYQYFEIFVKEQ-SEVGSMG 472          
BLAST of EY756345 vs. ExPASy Swiss-Prot
Match: S61A1_HUMAN (Protein transport protein Sec61 subunit alpha isoform 1 OS=Homo sapiens GN=SEC61A1 PE=1 SV=2)

HSP 1 Score: 173.326 bits (438), Expect = 5.556e-43
Identity = 88/117 (75.21%), Postives = 101/117 (86.32%), Query Frame = 1
Query:   19 NPFHALFYLVFMLTACALFSKTWIEVSGSSARDVAKQLKEQQMVMPGHTYSNLQKELNRNIPTAAAFGGVCIGALTVLDDFMGAIGSGTGILLAVTIIYQYFETFEKERASELGFFG 369
            +P HA+ Y+VFML +CA FSKTWIEVSGSSA+DVAKQLKEQQMVM GH  +++  ELNR IPTAAAFGG+CIGAL+VL DF+GAIGSGTGILLAVTIIYQYFE F KE+ SE+G  G
Sbjct:  357 DPVHAVVYIVFMLGSCAFFSKTWIEVSGSSAKDVAKQLKEQQMVMRGHRETSMVHELNRYIPTAAAFGGLCIGALSVLADFLGAIGSGTGILLAVTIIYQYFEIFVKEQ-SEVGSMG 472          
BLAST of EY756345 vs. ExPASy Swiss-Prot
Match: S61A1_CANFA (Protein transport protein Sec61 subunit alpha isoform 1 OS=Canis familiaris GN=SEC61A1 PE=1 SV=3)

HSP 1 Score: 173.326 bits (438), Expect = 5.556e-43
Identity = 88/117 (75.21%), Postives = 101/117 (86.32%), Query Frame = 1
Query:   19 NPFHALFYLVFMLTACALFSKTWIEVSGSSARDVAKQLKEQQMVMPGHTYSNLQKELNRNIPTAAAFGGVCIGALTVLDDFMGAIGSGTGILLAVTIIYQYFETFEKERASELGFFG 369
            +P HA+ Y+VFML +CA FSKTWIEVSGSSA+DVAKQLKEQQMVM GH  +++  ELNR IPTAAAFGG+CIGAL+VL DF+GAIGSGTGILLAVTIIYQYFE F KE+ SE+G  G
Sbjct:  357 DPVHAVVYIVFMLGSCAFFSKTWIEVSGSSAKDVAKQLKEQQMVMRGHRETSMVHELNRYIPTAAAFGGLCIGALSVLADFLGAIGSGTGILLAVTIIYQYFEIFVKEQ-SEVGSMG 472          
BLAST of EY756345 vs. ExPASy Swiss-Prot
Match: S61A1_BOVIN (Protein transport protein Sec61 subunit alpha isoform 1 OS=Bos taurus GN=SEC61A1 PE=2 SV=3)

HSP 1 Score: 173.326 bits (438), Expect = 5.556e-43
Identity = 88/117 (75.21%), Postives = 101/117 (86.32%), Query Frame = 1
Query:   19 NPFHALFYLVFMLTACALFSKTWIEVSGSSARDVAKQLKEQQMVMPGHTYSNLQKELNRNIPTAAAFGGVCIGALTVLDDFMGAIGSGTGILLAVTIIYQYFETFEKERASELGFFG 369
            +P HA+ Y+VFML +CA FSKTWIEVSGSSA+DVAKQLKEQQMVM GH  +++  ELNR IPTAAAFGG+CIGAL+VL DF+GAIGSGTGILLAVTIIYQYFE F KE+ SE+G  G
Sbjct:  357 DPVHAVVYIVFMLGSCAFFSKTWIEVSGSSAKDVAKQLKEQQMVMRGHRETSMVHELNRYIPTAAAFGGLCIGALSVLADFLGAIGSGTGILLAVTIIYQYFEIFVKEQ-SEVGSMG 472          
BLAST of EY756345 vs. ExPASy Swiss-Prot
Match: SC61A_BOVVA (Protein transport protein Sec61 subunit alpha OS=Bovichtus variegatus GN=sec61a PE=2 SV=3)

HSP 1 Score: 171.4 bits (433), Expect = 2.111e-42
Identity = 86/117 (73.50%), Postives = 100/117 (85.47%), Query Frame = 1
Query:   19 NPFHALFYLVFMLTACALFSKTWIEVSGSSARDVAKQLKEQQMVMPGHTYSNLQKELNRNIPTAAAFGGVCIGALTVLDDFMGAIGSGTGILLAVTIIYQYFETFEKERASELGFFG 369
            +P HA+ Y+VFML +CA FSKTWIEVSGSSA+DVAKQLKEQQMVM GH  +++  ELNR IPTAAAFGG+CIG L+V+ DF+GAIGSGTGILLAVTIIYQYFE F KE+ SE+G  G
Sbjct:  357 DPVHAVIYIVFMLGSCAFFSKTWIEVSGSSAKDVAKQLKEQQMVMRGHRETSMVHELNRYIPTAAAFGGLCIGGLSVMADFLGAIGSGTGILLAVTIIYQYFEIFVKEQ-SEVGSMG 472          
BLAST of EY756345 vs. ExPASy Swiss-Prot
Match: S61A2_DANRE (Protein transport protein Sec61 subunit alpha-like 2 OS=Danio rerio GN=sec61al2 PE=2 SV=3)

HSP 1 Score: 171.4 bits (433), Expect = 2.111e-42
Identity = 85/117 (72.65%), Postives = 100/117 (85.47%), Query Frame = 1
Query:   19 NPFHALFYLVFMLTACALFSKTWIEVSGSSARDVAKQLKEQQMVMPGHTYSNLQKELNRNIPTAAAFGGVCIGALTVLDDFMGAIGSGTGILLAVTIIYQYFETFEKERASELGFFG 369
            +P HA+ Y++FML +CA FSKTWIEVSGSSA+DVAKQLKEQQMVM GH  +++  ELNR IPTAAAFGG+CIG L+V+ DF+GAIGSGTGILLAVTIIYQYFE F KE+ SE+G  G
Sbjct:  357 DPIHAIIYIIFMLGSCAFFSKTWIEVSGSSAKDVAKQLKEQQMVMRGHRETSMVHELNRYIPTAAAFGGLCIGGLSVMADFLGAIGSGTGILLAVTIIYQYFEIFVKEQ-SEVGSVG 472          
BLAST of EY756345 vs. ExPASy Swiss-Prot
Match: S61A1_ONCMY (Protein transport protein Sec61 subunit alpha isoform A OS=Oncorhynchus mykiss GN=sec61aa PE=2 SV=3)

HSP 1 Score: 171.4 bits (433), Expect = 2.111e-42
Identity = 86/117 (73.50%), Postives = 99/117 (84.62%), Query Frame = 1
Query:   19 NPFHALFYLVFMLTACALFSKTWIEVSGSSARDVAKQLKEQQMVMPGHTYSNLQKELNRNIPTAAAFGGVCIGALTVLDDFMGAIGSGTGILLAVTIIYQYFETFEKERASELGFFG 369
            +P HA  Y+VFML +CA FSKTWIEVSGSSA+DVAKQLKEQQMVM GH  +++  ELNR IPTAAAFGG+CIG L+V+ DF+GAIGSGTGILLAVTIIYQYFE F KE+ SE+G  G
Sbjct:  357 DPIHAAIYIVFMLGSCAFFSKTWIEVSGSSAKDVAKQLKEQQMVMGGHRETSMVHELNRYIPTAAAFGGLCIGGLSVMADFLGAIGSGTGILLAVTIIYQYFEIFVKEQ-SEMGSMG 472          
The following BLAST results are available for this feature:
BLAST of EY756345 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 47
Match NameE-valueIdentityDescription
SC61A_DICDI3.148e-4677.97Protein transport protein Sec61 subunit alpha OS=D... [more]
S61A1_RAT5.556e-4375.21Protein transport protein Sec61 subunit alpha isof... [more]
S61A1_PONAB5.556e-4375.21Protein transport protein Sec61 subunit alpha isof... [more]
S61A1_MOUSE5.556e-4375.21Protein transport protein Sec61 subunit alpha isof... [more]
S61A1_HUMAN5.556e-4375.21Protein transport protein Sec61 subunit alpha isof... [more]
S61A1_CANFA5.556e-4375.21Protein transport protein Sec61 subunit alpha isof... [more]
S61A1_BOVIN5.556e-4375.21Protein transport protein Sec61 subunit alpha isof... [more]
SC61A_BOVVA2.111e-4273.50Protein transport protein Sec61 subunit alpha OS=B... [more]
S61A2_DANRE2.111e-4272.65Protein transport protein Sec61 subunit alpha-like... [more]
S61A1_ONCMY2.111e-4273.50Protein transport protein Sec61 subunit alpha isof... [more]

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Properties
Property NameValue
Genbank descriptionCS13-C1-001-007-E09-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY756345 ID=EY756345; Name=EY756345; organism=Citrus sinensis; type=EST; length=509bp
CCACGCGTCCGGGCAGCCAATCCTTTCCATGCTCTGTTCTACCTGGTTTT
TATGCTTACTGCTTGTGCTCTTTTCTCGAAAACTTGGATTGAAGTTTCAG
GGTCTTCTGCCCGGGATGTGGCCAAGCAGCTTAAGGAGCAACAAATGGTG
ATGCCTGGACATACATACTCAAATCTTCAAAAGGAACTGAACCGGAACAT
ACCAACTGCTGCTGCCTTTGGGGGAGTGTGCATTGGTGCATTAACAGTCC
TGGATGATTTCATGGGAGCAATTGGGTCAGGAACTGGGATATTGCTCGCA
GTTACGATCATATATCAGTACTTTGAGACCTTTGAGAAGGAGAGAGCTAG
CGAACTTGGCTTCTTTGGCTTTTAATACACCAATGATCTTGAGTTTCAGA
TTACCTGGTGAGTAATATTGGGCAATATTGTTGCAGAATTCAAAGACTTA
ACATAGGCCATGGCTTGTTAACACCTATGAATAGAGATTCAGATCAGTCT
GTAGTTTGG
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