EY756342

Overview
NameEY756342
Unique NameEY756342
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length725
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY756342 vs. ExPASy Swiss-Prot
Match: CDI8_ARATH (Cadmium-induced protein AS8 OS=Arabidopsis thaliana GN=At4g19070 PE=2 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 1.279e-25
Identity = 56/130 (43.08%), Postives = 76/130 (58.46%), Query Frame = 3 
Query:    6 RPQRWNPVHPTSGAXXXXXXXXXXXXXXXXXXXXDVIGYVGAGCGVGFSVGITFAGFGIGFPANFLLQLPYRAIKATRSGELEIALSNARSFAGDGWNNIAPRVSGFQREATERFSSFKQKQFLDKGVSL 395
            R ++WNPVHPT GA                    +VIGYVGAGCGVGFSVGIT AG GIG P NFLL  PY  ++ATR G         ++ + +GW+++ P+++G QR+ +E  S F +K  L+  + L
Sbjct:   12 RYEKWNPVHPTYGAFWGMGIGIGCGVGWGPGFGPEVIGYVGAGCGVGFSVGITLAGLGIGLPTNFLLAAPYNTVEATRKGAFNFF---GKNLSTNGWSDLMPQIAGLQRQVSEICSGFNKKPHLNNAIDL 138
The following BLAST results are available for this feature:
BLAST of EY756342 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
CDI8_ARATH1.279e-2543.08Cadmium-induced protein AS8 OS=Arabidopsis thalian... [more]
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Properties
Property NameValue
Genbank descriptionCS13-C1-001-007-E06-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY756342 ID=EY756342; Name=EY756342; organism=Citrus sinensis; type=EST; length=725bp
CCACGCGTCCGCAGAGATGGAATCCAGTGCATCCGACCTCAGGTGCATTC
TGGGGAATGGGTGTTGGGATCGGTTGTGGTGTTGGTTGGGGTCCTGGTTT
CGGCCCTGATGTTATTGGCTATGTGGGTGCTGGCTGTGGTGTTGGTTTCA
GTGTTGGCATCACTTTTGCTGGTTTTGGCATTGGCTTTCCTGCTAATTTC
CTCTTGCAACTTCCTTACAGAGCAATTAAAGCTACAAGAAGTGGTGAATT
GGAGATTGCGCTGTCAAATGCTAGAAGTTTTGCTGGTGATGGCTGGAATA
ATATTGCACCTCGTGTTTCTGGCTTCCAAAGAGAAGCAACTGAAAGATTC
TCTAGCTTCAAGCAAAAACAATTCTTGGATAAAGGGGTTTCTTTATGCAA
CGATGTGAAGAGTATGATGCCTGTGAAGTCTATTCGGGAACGTTTAGGGA
GATTTAGGTTACCTTTCTTCCACCCTGGCAAAGATTTGAAGGATTAACGC
CATGGAGTAGTCTCGGAGCTGGCGCTATATGCATTCTTTAAGATTTGCAA
GAATTCAGGCACCTCACTCATAATTCTGAGTTGTATATGCACGAATTATA
TTAGTCACATATCAGTAAACTATCTTTTACAACAGCATTTGTCTTCGTCA
TTTTCCAGAAATGGGGAATATTAGATGGCATGAATTCATGAGTGCGAAAA
AAAAAAAAAAAAAAAAAAAAAAAAA
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