EY756338

Overview
NameEY756338
Unique NameEY756338
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length425
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig10234 contig Csv1_Contig10234:468..892. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of EY756338 vs. ExPASy Swiss-Prot
Match: TMP14_ARATH (Thylakoid membrane phosphoprotein 14 kDa, chloroplastic OS=Arabidopsis thaliana GN=TMP14 PE=1 SV=2)

HSP 1 Score: 96.6709 bits (239), Expect = 4.031e-20
Identity = 46/73 (63.01%), Postives = 52/73 (71.23%), Query Frame = 1 
Query:    1 AVTSLAVTVAIAVWGSTGMISAIDRXXXXXXXXXXXXIGYTGWFAYKNLVFKPDREALIQKIKDTYKDIIGSS 219
            A+ SLA    +A+WGS GMISAIDR            IGYTGWF YKNLVFKPDREAL +K+K TYKDI+GSS
Sbjct:  102 AIGSLAFAGVVALWGSAGMISAIDRLPLVPGVLELVGIGYTGWFTYKNLVFKPDREALFEKVKSTYKDILGSS 174
The following BLAST results are available for this feature:
BLAST of EY756338 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
TMP14_ARATH4.031e-2063.01Thylakoid membrane phosphoprotein 14 kDa, chloropl... [more]
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Properties
Property NameValue
Genbank descriptionCS13-C1-001-007-E01-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY756338 ID=EY756338; Name=EY756338; organism=Citrus sinensis; type=EST; length=425bp
GCAGTGACTTCACTTGCTGTAACTGTTGCTATTGCCGTATGGGGCTCTAC
GGGAATGATTTCGGCAATTGATAGGCTTCCTTTAGTTCCTGGAGTTCTCG
AGCTTGTCGGCATTGGCTACACCGGGTGGTTTGCATACAAGAACCTGGTT
TTCAAACCAGACAGGGAAGCATTAATACAGAAAATAAAAGACACATACAA
GGATATAATAGGGAGCAGCTGAAGGAAACCAAAGGAATAGTACGGCTGCT
GAGATGATGAGGTAAAAGTTTCACTTTTTGAAGCGAATATCTTGCAGCAT
TAATTGAGTATAAGAATGTAAACAACAATGCTTCTTCTGTTGGCATTAGT
TCCTAACCAGAGTAATTAAAACTCATGTGATGTACTTCTATCCTTTTAAA
TACATGTTTGTAACTACTAAAAAAA
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