EY756332

Overview
NameEY756332
Unique NameEY756332
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length516
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY756332 vs. ExPASy Swiss-Prot
Match: RL7A2_ARATH (60S ribosomal protein L7a-2 OS=Arabidopsis thaliana GN=RPL7AB PE=2 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 5.411e-17
Identity = 42/63 (66.67%), Postives = 48/63 (76.19%), Query Frame = 2 
Query:   11 VTTVKNEDKMEFSRILEAIKANFNDKYDEHRKKWGGGIMGSKSQXXXXXXXXXXXXXXXQRMS 199
            +TTVKNEDK+EFS+ILEAIKANFNDKY+E+RKKWGGGIMGSKSQ               QRM+
Sbjct:  194 LTTVKNEDKLEFSKILEAIKANFNDKYEEYRKKWGGGIMGSKSQAKTKAKERVIAKEAAQRMN 256
[Close]
BLAST of EY756332 vs. ExPASy Swiss-Prot
Match: RL7A1_ARATH (60S ribosomal protein L7a-1 OS=Arabidopsis thaliana GN=RPL7AA PE=2 SV=2)

HSP 1 Score: 87.0409 bits (214), Expect = 5.411e-17
Identity = 42/63 (66.67%), Postives = 48/63 (76.19%), Query Frame = 2 
Query:   11 VTTVKNEDKMEFSRILEAIKANFNDKYDEHRKKWGGGIMGSKSQXXXXXXXXXXXXXXXQRMS 199
            +TTVKNEDK+EFS+ILEAIKANFNDKY+E+RKKWGGGIMGSKSQ               QRM+
Sbjct:  195 LTTVKNEDKLEFSKILEAIKANFNDKYEEYRKKWGGGIMGSKSQAKTKAKERVIAKEAAQRMN 257
[Close]
BLAST of EY756332 vs. ExPASy Swiss-Prot
Match: RL7A_ORYSJ (60S ribosomal protein L7a OS=Oryza sativa subsp. japonica GN=RPL7A PE=2 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 2.686e-16
Identity = 41/63 (65.08%), Postives = 47/63 (74.60%), Query Frame = 2 
Query:   11 VTTVKNEDKMEFSRILEAIKANFNDKYDEHRKKWGGGIMGSKSQXXXXXXXXXXXXXXXQRMS 199
            +TTVKNEDK+EFS+ILEAIKANFNDK+DE RKKWGGG+MGSKSQ               QRM+
Sbjct:  196 LTTVKNEDKLEFSKILEAIKANFNDKFDEVRKKWGGGVMGSKSQAKTKAREKLLAKEAAQRMT 258
The following BLAST results are available for this feature:
BLAST of EY756332 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 3
Match NameE-valueIdentityDescription
RL7A2_ARATH5.411e-1766.6760S ribosomal protein L7a-2 OS=Arabidopsis thalian... [more]
RL7A1_ARATH5.411e-1766.6760S ribosomal protein L7a-1 OS=Arabidopsis thalian... [more]
RL7A_ORYSJ2.686e-1665.0860S ribosomal protein L7a OS=Oryza sativa subsp. j... [more]
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Properties
Property NameValue
Genbank descriptionCS13-C1-001-007-D07-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY756332 ID=EY756332; Name=EY756332; organism=Citrus sinensis; type=EST; length=516bp
CCACGCGTCCGTGACCACAGTCAAGAATGAAGATAAGATGGAGTTCAGCA
GAATCTTAGAGGCTATCAAGGCCAATTTTAATGATAAATACGACGAGCAT
AGGAAAAAGTGGGGTGGTGGAATTATGGGTTCAAAATCACAAGCCAAGAC
CAAGGCTAAAGAAAAGCTCCTTGCTAAGGAAGCTGCCCAGAGAATGTCTT
AAGAGCCAATCTTTTGCAATTTTGTTAATCTTCTGCAATTTTGTTATTTA
GGATATGAGCATTGGGGGCTTTTTACTCTCTGAGATTTTTGGTTATTTTG
AAGTTGTTCAGGCTGATTACAGAGGTTTTCTTTCATTATAGGGAGATTAA
ATTTAATTGAGAGGTAAAGCAGGATATTTTTTTGACATGAATATGCATTC
TTGTCATAGGTTTAGTCCTGATTCAATGCAAATGCTTGTTTAGTATAAGT
TGTTTTTCACCATCATTGAACATTTATATCTCTGCCTTCAGTCTCCTAGT
AAAAAAAAAAAAAAAA
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