EY732208
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of EY732208 vs. ExPASy Swiss-Prot
Match: FAD3C_SESIN (Omega-3 fatty acid desaturase, chloroplastic OS=Sesamum indicum GN=FAD7 PE=2 SV=1) HSP 1 Score: 211.075 bits (536), Expect = 4.809e-54 Identity = 94/108 (87.04%), Postives = 100/108 (92.59%), Query Frame = 1 Query: 10 GKEWSYLRGGLTTLDRDYGWFNNIHHDIGTHVIHHLFPQIPHYHLIEATEAARPVLGKYYREPKKSGPIPFNLFGDLIRSMSKDHYVSDNGDVVYYQTDPQLNGSSKS 333 GKEWSYLRGGLTTLDRDYGW NNIHHDIGTHVIHHLFPQIPHYHLIEATEAA+PVLGKYYREPKKS P+PF+L GDL RS+ +DHYVSD GDVVYYQTDPQL G+ KS Sbjct: 340 GKEWSYLRGGLTTLDRDYGWINNIHHDIGTHVIHHLFPQIPHYHLIEATEAAKPVLGKYYREPKKSAPLPFHLLGDLTRSLKRDHYVSDVGDVVYYQTDPQLTGAEKS 447
BLAST of EY732208 vs. ExPASy Swiss-Prot
Match: FAD3D_ARATH (Temperature-sensitive omega-3 fatty acid desaturase, chloroplastic OS=Arabidopsis thaliana GN=FAD8 PE=2 SV=1) HSP 1 Score: 201.445 bits (511), Expect = 3.810e-51 Identity = 87/104 (83.65%), Postives = 96/104 (92.31%), Query Frame = 1 Query: 10 GKEWSYLRGGLTTLDRDYGWFNNIHHDIGTHVIHHLFPQIPHYHLIEATEAARPVLGKYYREPKKSGPIPFNLFGDLIRSMSKDHYVSDNGDVVYYQTDPQLNG 321 GKEWSYLRGGLTTLDRDYGW NNIHHDIGTHVIHHLFPQIPHYHL+EATEAA+PVLGKYYREPK SGP+P +L G LI+SM +DH+VSD GDVVYY+ DP+LNG Sbjct: 329 GKEWSYLRGGLTTLDRDYGWINNIHHDIGTHVIHHLFPQIPHYHLVEATEAAKPVLGKYYREPKNSGPLPLHLLGSLIKSMKQDHFVSDTGDVVYYEADPKLNG 432
BLAST of EY732208 vs. ExPASy Swiss-Prot
Match: FAD3C_RICCO (Omega-3 fatty acid desaturase, chloroplastic OS=Ricinus communis GN=FAD7A-1 PE=2 SV=1) HSP 1 Score: 201.445 bits (511), Expect = 3.810e-51 Identity = 87/104 (83.65%), Postives = 96/104 (92.31%), Query Frame = 1 Query: 10 GKEWSYLRGGLTTLDRDYGWFNNIHHDIGTHVIHHLFPQIPHYHLIEATEAARPVLGKYYREPKKSGPIPFNLFGDLIRSMSKDHYVSDNGDVVYYQTDPQLNG 321 GK WSYLRGGLTTLDRDYGW NNIHHDIGTHVIHHLFPQIPHYHL+EATEAA+PV+GKYYREPKKSGP+P +L G L+RSM +DHYVSD GDVVYYQ DP+L+G Sbjct: 350 GKAWSYLRGGLTTLDRDYGWINNIHHDIGTHVIHHLFPQIPHYHLVEATEAAKPVMGKYYREPKKSGPLPLHLLGSLVRSMKEDHYVSDTGDVVYYQKDPKLSG 453
BLAST of EY732208 vs. ExPASy Swiss-Prot
Match: FAD3C_SOYBN (Omega-3 fatty acid desaturase, chloroplastic OS=Glycine max GN=FAD7 PE=2 SV=1) HSP 1 Score: 199.904 bits (507), Expect = 1.109e-50 Identity = 89/108 (82.41%), Postives = 98/108 (90.74%), Query Frame = 1 Query: 10 GKEWSYLRGGLTTLDRDYGWFNNIHHDIGTHVIHHLFPQIPHYHLIEATEAARPVLGKYYREPKKS-GPIPFNLFGDLIRSMSKDHYVSDNGDVVYYQTDPQLNGSSK 330 GKEWSYLRGGLTTLDRDYGW NNIHHDIGTHVIHHLFPQIPHYHL+EATEAA+PV GKYYREPKKS P+PF+L G++IRS DH+VSD GDVVYYQTD ++NGSSK Sbjct: 344 GKEWSYLRGGLTTLDRDYGWINNIHHDIGTHVIHHLFPQIPHYHLVEATEAAKPVFGKYYREPKKSAAPLPFHLIGEIIRSFKTDHFVSDTGDVVYYQTDSKINGSSK 451
BLAST of EY732208 vs. ExPASy Swiss-Prot
Match: FAD3E_TOBAC (Omega-3 fatty acid desaturase, endoplasmic reticulum OS=Nicotiana tabacum GN=FAD3 PE=2 SV=1) HSP 1 Score: 192.586 bits (488), Expect = 1.770e-48 Identity = 85/102 (83.33%), Postives = 95/102 (93.14%), Query Frame = 1 Query: 10 GKEWSYLRGGLTTLDRDYGWFNNIHHDIGTHVIHHLFPQIPHYHLIEATEAARPVLGKYYREPKKSGPIPFNLFGDLIRSMSKDHYVSDNGDVVYYQTDPQL 315 GKEWSYLRGGLTT+DRDYG FNNIHHDIGTHVIHHLFPQIPHYHL EAT+AA+PVLGKYYREPKKSGPIPF+L DL RSM +DHYVSD+G++V+YQTDP + Sbjct: 270 GKEWSYLRGGLTTVDRDYGLFNNIHHDIGTHVIHHLFPQIPHYHLREATKAAKPVLGKYYREPKKSGPIPFHLVKDLTRSMKQDHYVSDSGEIVFYQTDPHI 371
BLAST of EY732208 vs. ExPASy Swiss-Prot
Match: FAD3E_PHAAU (Omega-3 fatty acid desaturase, endoplasmic reticulum OS=Phaseolus aureus GN=ARG1 PE=2 SV=1) HSP 1 Score: 189.119 bits (479), Expect = 1.957e-47 Identity = 80/106 (75.47%), Postives = 98/106 (92.45%), Query Frame = 1 Query: 10 GKEWSYLRGGLTTLDRDYGWFNNIHHDIGTHVIHHLFPQIPHYHLIEATEAARPVLGKYYREPKKSGPIPFNLFGDLIRSMSKDHYVSDNGDVVYYQTDPQLNGSS 327 G+EWSYLRGGLTT+DRDYGW NN+HHDIGTHVIHHLFPQIPHYHL+EAT++A+ VLGKYYREP+KSGP+PF+L L++S+S+DH+VSD GD+VYYQTDP+L+ S Sbjct: 270 GQEWSYLRGGLTTVDRDYGWINNVHHDIGTHVIHHLFPQIPHYHLVEATKSAKSVLGKYYREPQKSGPLPFHLLKYLLQSISQDHFVSDTGDIVYYQTDPKLHQDS 375
BLAST of EY732208 vs. ExPASy Swiss-Prot
Match: FAD3C_BRANA (Omega-3 fatty acid desaturase, chloroplastic (Fragment) OS=Brassica napus GN=FAD7 PE=2 SV=1) HSP 1 Score: 189.119 bits (479), Expect = 1.957e-47 Identity = 84/107 (78.50%), Postives = 93/107 (86.92%), Query Frame = 1 Query: 10 GKEWSYLRGGLTTLDRDYGWFNNIHHDIGTHVIHHLFPQIPHYHLIEATEAARPVLGKYYREPKKSGPIPFNLFGDLIRSMSKDHYVSDNGDVVYYQTDPQLNGSSK 330 GKEWSYLRGGLTTLDRDYG NNIHHDIGTHVIHHLFPQIPHYHL+EATEAA+PVLGKYYREP KSGP+P +L G L +S+ +DH+VSD GDVVYY+ DP L G K Sbjct: 294 GKEWSYLRGGLTTLDRDYGLINNIHHDIGTHVIHHLFPQIPHYHLVEATEAAKPVLGKYYREPDKSGPLPLHLLGILAKSIKEDHFVSDEGDVVYYEADPNLYGEIK 400
BLAST of EY732208 vs. ExPASy Swiss-Prot
Match: FAD3C_ARATH (Omega-3 fatty acid desaturase, chloroplastic OS=Arabidopsis thaliana GN=FAD7 PE=1 SV=1) HSP 1 Score: 185.652 bits (470), Expect = 2.164e-46 Identity = 83/107 (77.57%), Postives = 92/107 (85.98%), Query Frame = 1 Query: 10 GKEWSYLRGGLTTLDRDYGWFNNIHHDIGTHVIHHLFPQIPHYHLIEATEAARPVLGKYYREPKKSGPIPFNLFGDLIRSMSKDHYVSDNGDVVYYQTDPQLNGSSK 330 GKEWSYLRGGLTTLDRDYG NNIHHDIGTHVIHHLFPQIPHYHL+EATEAA+PVLGKYYREP KSGP+P +L L +S+ +DHYVSD G+VVYY+ DP L G K Sbjct: 336 GKEWSYLRGGLTTLDRDYGLINNIHHDIGTHVIHHLFPQIPHYHLVEATEAAKPVLGKYYREPDKSGPLPLHLLEILAKSIKEDHYVSDEGEVVYYKADPNLYGEVK 442
BLAST of EY732208 vs. ExPASy Swiss-Prot
Match: FAD3E_SOYBN (Omega-3 fatty acid desaturase, endoplasmic reticulum OS=Glycine max GN=FAD3 PE=2 SV=1) HSP 1 Score: 182.57 bits (462), Expect = 1.832e-45 Identity = 81/107 (75.70%), Postives = 93/107 (86.92%), Query Frame = 1 Query: 10 GKEWSYLRGGLTTLDRDYGWFNNIHHDIGTHVIHHLFPQIPHYHLIEATEAARPVLGKYYREPKKSGPIPFNLFGDLIRSMSKDHYVSDNGDVVYYQTDPQLNGSSK 330 GKEWSYLRGGLTT+DRDYGW NIHHDIGTHVIHHLFPQIPHYHL+EAT+AA+PVLG YYREP++S P+PF+L LI+SM +DH+VSD GDVVYYQTD L S + Sbjct: 273 GKEWSYLRGGLTTVDRDYGWIYNIHHDIGTHVIHHLFPQIPHYHLVEATQAAKPVLGDYYREPERSAPLPFHLIKYLIQSMRQDHFVSDTGDVVYYQTDSLLLHSQR 379
BLAST of EY732208 vs. ExPASy Swiss-Prot
Match: FAD3E_ARATH (Omega-3 fatty acid desaturase, endoplasmic reticulum OS=Arabidopsis thaliana GN=FAD3 PE=2 SV=1) HSP 1 Score: 179.104 bits (453), Expect = 2.025e-44 Identity = 78/102 (76.47%), Postives = 90/102 (88.24%), Query Frame = 1 Query: 10 GKEWSYLRGGLTTLDRDYGWFNNIHHDIGTHVIHHLFPQIPHYHLIEATEAARPVLGKYYREPKKSGPIPFNLFGDLIRSMSKDHYVSDNGDVVYYQTDPQL 315 GKEWSYLRGGLTT+DRDYG FNNIHHDIGTHVIHHLFPQIPHYHL++AT+AA+ VLG+YYREPK SG IP +L L+ S+ KDHYVSD GD+V+Y+TDP L Sbjct: 274 GKEWSYLRGGLTTIDRDYGIFNNIHHDIGTHVIHHLFPQIPHYHLVDATKAAKHVLGRYYREPKTSGAIPIHLVESLVASIKKDHYVSDTGDIVFYETDPDL 375 The following BLAST results are available for this feature:
BLAST of EY732208 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 18
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Sequences
The
following sequences are available for this feature:
EST sequence >EY732208 ID=EY732208; Name=EY732208; organism=Citrus sinensis; type=EST; length=705bpback to top |