EY756305
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY756305 vs. ExPASy Swiss-Prot
Match: RFA2_SCHPO (Replication factor A protein 2 OS=Schizosaccharomyces pombe GN=ssb2 PE=1 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 6.033e-13 Identity = 46/144 (31.94%), Postives = 73/144 (50.69%), Query Frame = 1 Query: 118 LLPMTVKQXXXXXXXXXXXXX-IDGADVNTITVVGIVCDMQDKEPQFIFLIDDGTGRIECSRWAHEQMEFNEVNQISKGMYVRVYGHLKAFQDKRSLNAYSLRPIIDFNEITSHFVECIYVQLYNTRLRG--GSSNQPQMTNSN 540 L P+T+KQ IDG +V +T VG++ ++ + + I+DGTG IE W H + +++++ YVRVYG++K F K + + +R I D NE+ HF+E I V L+ T+ +N P SN Sbjct: 50 LRPVTIKQILNASQVHADAEFKIDGVEVGQVTFVGVLRNIHAQTTNTTYQIEDGTGMIEVRHWEH----IDALSELATDTYVRVYGNIKIFSGKIYIASQYIRTIKDHNEVHFHFLEAIAVHLHFTQKANAVNGANAPGYGTSN 189
BLAST of EY756305 vs. ExPASy Swiss-Prot
Match: RFA2_RAT (Replication protein A 32 kDa subunit OS=Rattus norvegicus GN=Rpa2 PE=2 SV=2) HSP 1 Score: 70.4774 bits (171), Expect = 1.486e-11 Identity = 43/157 (27.39%), Postives = 78/157 (49.68%), Query Frame = 1 Query: 73 PDPSSSFSKNR-NVRTLLPMTVKQXXXXXXXXXXXXXIDGADVNTITVVGIVCDMQDKEPQFIFLIDDGTGR-IECSRWAHEQMEFNEVNQISKGMYVRVYGHLKAFQDKRSLNAYSLRPIIDFNEITSHFVECIYVQLYNTRLRGGSS-NQPQMTN 534 P PS + K+R + ++P T+ Q I +++ +T+VGI+ + ++ IDD T ++ +W E + YV+V GHL++FQ+K+SL A+ + P+ D NE T+H +E + L ++ +S +P M+N Sbjct: 30 PTPSQAEKKSRARAQHIVPCTISQLLSATLTDEVFK-IGDVEISQVTIVGIIRHAEKAPTNIVYKIDDMTAAPMDVRQWVDTDDTSGENTVVPPETYVKVAGHLRSFQNKKSLVAFKIIPLEDMNEFTAHILEVVNSHLMLSKANSQASVGRPSMSN 185
BLAST of EY756305 vs. ExPASy Swiss-Prot
Match: RFA2_PONAB (Replication protein A 32 kDa subunit OS=Pongo abelii GN=RPA2 PE=2 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 5.647e-11 Identity = 39/135 (28.89%), Postives = 69/135 (51.11%), Query Frame = 1 Query: 73 PDPSSSFSKNR-NVRTLLPMTVKQXXXXXXXXXXXXXIDGADVNTITVVGIVCDMQDKEPQFIFLIDDGTGR-IECSRWAHEQMEFNEVNQISKGMYVRVYGHLKAFQDKRSLNAYSLRPIIDFNEITSHFVECI 471 P PS + K+R + ++P T+ Q I +++ +T+VGI+ + ++ IDD T ++ +W +E + YV+V GHL++FQ+K+SL A+ + P+ D NE T+H +E I Sbjct: 30 PAPSQAEKKSRARAQHIVPCTISQLLSATLVDEVFR-IGNVEISQVTIVGIIRHAEKAPTNIVYKIDDMTAAPMDVRQWVDTDDASSENTVVPPETYVKVAGHLRSFQNKKSLVAFKIMPLEDMNEFTTHILEVI 163
BLAST of EY756305 vs. ExPASy Swiss-Prot
Match: RFA2_MOUSE (Replication protein A 32 kDa subunit OS=Mus musculus GN=Rpa2 PE=1 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 5.647e-11 Identity = 42/157 (26.75%), Postives = 78/157 (49.68%), Query Frame = 1 Query: 73 PDPSSSFSKNR-NVRTLLPMTVKQXXXXXXXXXXXXXIDGADVNTITVVGIVCDMQDKEPQFIFLIDDGTGR-IECSRWAHEQMEFNEVNQISKGMYVRVYGHLKAFQDKRSLNAYSLRPIIDFNEITSHFVECIYVQLYNTRLRG-GSSNQPQMTN 534 P PS + K+R + ++P T+ Q I +++ +T+VGI+ + ++ IDD T ++ +W E + YV+V GHL++FQ+K+SL A+ + P+ D NE T+H +E + + ++ S+ +P M+N Sbjct: 30 PTPSQAEKKSRVRAQHIVPCTISQLLSATLTDEVFR-IGDVEISQVTIVGIIRHAEKAPTNIVYKIDDMTAPPMDVRQWVDTDDASGENAVVPPETYVKVAGHLRSFQNKKSLVAFKIIPLEDMNEFTAHILEVVNSHMMLSKPNSQASAGRPSMSN 185
BLAST of EY756305 vs. ExPASy Swiss-Prot
Match: RFA2_HUMAN (Replication protein A 32 kDa subunit OS=Homo sapiens GN=RPA2 PE=1 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 5.647e-11 Identity = 39/135 (28.89%), Postives = 69/135 (51.11%), Query Frame = 1 Query: 73 PDPSSSFSKNR-NVRTLLPMTVKQXXXXXXXXXXXXXIDGADVNTITVVGIVCDMQDKEPQFIFLIDDGTGR-IECSRWAHEQMEFNEVNQISKGMYVRVYGHLKAFQDKRSLNAYSLRPIIDFNEITSHFVECI 471 P PS + K+R + ++P T+ Q I +++ +T+VGI+ + ++ IDD T ++ +W +E + YV+V GHL++FQ+K+SL A+ + P+ D NE T+H +E I Sbjct: 30 PAPSQAEKKSRARAQHIVPCTISQLLSATLVDEVFR-IGNVEISQVTIVGIIRHAEKAPTNIVYKIDDMTAAPMDVRQWVDTDDTSSENTVVPPETYVKVAGHLRSFQNKKSLVAFKIMPLEDMNEFTTHILEVI 163
BLAST of EY756305 vs. ExPASy Swiss-Prot
Match: RFA2_YEAST (Replication factor A protein 2 OS=Saccharomyces cerevisiae GN=RFA2 PE=1 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 9.632e-11 Identity = 45/168 (26.79%), Postives = 73/168 (43.45%), Query Frame = 1 Query: 82 SSSFSKNRNVRTLLPMTVKQXXXXXXXXXXXXXID-GADVNTITVVGIVCDMQDKEPQFIFLIDDGTGRIECSRWAHEQMEFNEVNQISKGM--------------YVRVYGHLKAFQDKRSLNAYSLRPIIDFNEITSHFVECIYVQLYNTRLRGGSSNQPQMTNSN 540 S N V TL P+T+KQ + +++ + VG+V ++ D I+DGTG+IE +W+ + + N S G YV+V+G LK F K+++ ++PI FNE+ +H +E I + G QP + SN Sbjct: 27 SGESETNTRVNTLTPVTIKQILESKQDIQDGPFVSHNQELHHVCFVGVVRNITDHTANIFLTIEDGTGQIEVRKWSEDANDLAAGNDDSSGKGYGSQVAQQFEIGGYVKVFGALKEFGGKKNIQYAVIKPIDSFNEVLTHHLEVIKCH----SIASGMMKQPLESASN 190 The following BLAST results are available for this feature:
BLAST of EY756305 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 6
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >EY756305 ID=EY756305; Name=EY756305; organism=Citrus sinensis; type=EST; length=891bpback to top |