EY756304

Overview
NameEY756304
Unique NameEY756304
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length461
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig7009 contig Csv1_Contig7009:390..850. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
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BLAST of EY756304 vs. ExPASy Swiss-Prot
Match: RBS_LACSA (Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Lactuca sativa GN=RBCS PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 2.541e-11
Identity = 29/40 (72.50%), Postives = 36/40 (90.00%), Query Frame = 1 
Query:    7 VREVGAVQKEYPHSFVRIIGFDNKRQVQCISFIAAKPPGV 126
            ++EVG  +KEYP++F+R+IGFDN RQVQCISFI AKPPGV
Sbjct:  141 MKEVGECKKEYPNAFIRVIGFDNIRQVQCISFIVAKPPGV 180
The following BLAST results are available for this feature:
BLAST of EY756304 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
RBS_LACSA2.541e-1172.50Ribulose bisphosphate carboxylase small chain, chl... [more]
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Properties
Property NameValue
Genbank descriptionCS13-C1-001-007-A12-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY756304 ID=EY756304; Name=EY756304; organism=Citrus sinensis; type=EST; length=461bp
CCACGCGTCCGGGAGGTTGGTGCGGTCCAGAAGGAATACCCACATTCATT
CGTCCGAATTATCGGATTTGACAACAAGCGTCAAGTGCAGTGCATCAGTT
TCATTGCTGCCAAGCCACCAGGCGTCTAGGTTCCCAATTAAATTTGTGTA
ACCACCCATGCAATATTGTTGATTATTATTATGTGTAACCCCCATAATGA
TCATTCGATCAATGGGGGTTCGGTTTGCGTTTAATTTGTACTTAGGCTGC
TGTTGCTGCTGCTCAAACTTTTTTGGTTTTCTCCCCGACTTTGGCTTCTT
TTTTTTTTTTTTATATATATTTTAATAATTGAATCCTTTGTTTTCAGTTT
CATTAATCTGGGTCTCGGATGTTCAGTTTAATGAGTGAGAATTACTGGAA
TTAAAAGAGTAGTTTTATGATTCTTGCAANNNAAAAAAAAAAAAAAAAAA
AAAAAAAAAAG
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