EY756302

Overview
NameEY756302
Unique NameEY756302
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length861
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY756302 vs. ExPASy Swiss-Prot
Match: U737_TOBAC (UPF0737 protein mc410 OS=Nicotiana tabacum GN=MC410 PE=2 SV=1)

HSP 1 Score: 169.088 bits (427), Expect = 4.012e-47
Identity = 88/184 (47.83%), Postives = 119/184 (64.67%), Query Frame = 3
Query:   12 SESQENFFNDLSKVSAEADASTNLNSRGRWVSNISRSAEIEEEKQSDAGNKRKMLFDEVNNKKRLEREALPSDLHDXXXXXXXXXXXXEGSTAENEDVAESEVEGSTSRMVSHQDDGSKRYITVGGSSEVPKEVRGFPDSSVVDAHGQKRFNGSSENEFKVGNISYGVPFSVQPMNIMNIPYTI 563
            S+S ++  N LS ++ + DAS  LNS G WV N SR  E+EE++++D G+KRK LF E + +K+ ERE   +D HD            EGSTAENEDVA+SE  GSTSR +   D+ SKR++   G +EV KE+R  P SS V+  GQ+RF  SSE + K GNI Y +PF  Q +NIMN+PY++
Sbjct:   68 SDSTKHEGNLLSSINVDVDASKKLNSGGFWVQNDSRPVEVEEDRRADVGDKRKNLFRESSQQKKQEREGHHADTHDKTRTSHISITTDEGSTAENEDVADSETVGSTSRQILQHDESSKRFVGSSGLAEVHKELRSVPASSGVELIGQRRFTISSEKDVKFGNIPYTIPFQGQSINIMNLPYSM 251          

HSP 2 Score: 40.4318 bits (93), Expect = 4.012e-47
Identity = 29/92 (31.52%), Postives = 40/92 (43.48%), Query Frame = 1
Query:  550 YLTPYAVREANSAGVPGTSVVGMTQKMPTGSGERSGAQPVNPGNTPVMFGYSAVPTSMVEK-IFHGVWSLSSAIHLLMLVEATNSDSIGMDK 822
            Y  P      ++       V G+ Q M T   +R  + PV P   P+MFGYS+V    ++    HGV     A HLL L  +     +G DK
Sbjct:  249 YSMPLNSNTVSTTSTTSYPVPGVMQLMATTCVDRPPSHPVIPAYLPLMFGYSSVQLPTLDNDNLHGV-----ASHLLQLHPSHGRGPLGSDK 335          
BLAST of EY756302 vs. ExPASy Swiss-Prot
Match: U7375_ARATH (UPF0737 protein At4g28910 OS=Arabidopsis thaliana GN=AFPH2 PE=2 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 6.251e-20
Identity = 71/186 (38.17%), Postives = 102/186 (54.84%), Query Frame = 3
Query:   24 ENFFNDLSKV-SAEADASTNLNSRGRWVSNISRSAEIEEEKQSDAGNKRKMLFDEVNNKKRLEREALPSDLHD-XXXXXXXXXXXXEGSTAENEDVAESEVEGSTSRMVSHQDDGSKRYITVGGSSEVPKEVRGFPDSSVVD-AHGQKRFN--GSSENEFKVGNISYGVPFSVQPMNIM-NIPYTI 563
            +NFFNDLSK  + EA+AST    +  WV         E+E + +AGNKRK  F  +N+ K+ E+++   D+H+             EGSTAENEDVAESEV G +S                  S+   + VR   D+++VD   GQ+R N  GS   EF + N+SY VPF+V P N++ ++PY++
Sbjct:   81 QNFFNDLSKAPTTEAEAST----KPLWV---------EDESRKEAGNKRKFGFPGMNDDKKKEKDSSHVDMHEKKTKASHVSTATDEGSTAENEDVAESEVGGGSS------------------SNHAKEVVRPPTDTNIVDNLTGQRRSNHGGSGTEEFTMRNMSYTVPFTVHPQNVVTSMPYSL 235          
The following BLAST results are available for this feature:
BLAST of EY756302 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
U737_TOBAC4.012e-4747.83UPF0737 protein mc410 OS=Nicotiana tabacum GN=MC41... [more]
U7375_ARATH6.251e-2038.17UPF0737 protein At4g28910 OS=Arabidopsis thaliana ... [more]
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Properties
Property NameValue
Genbank descriptionCS13-C1-001-007-A09-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY756302 ID=EY756302; Name=EY756302; organism=Citrus sinensis; type=EST; length=861bp
CCACGCGTCCGAGTGAATCTCAAGAGAACTTCTTCAATGACCTATCCAAG
GTCTCTGCTGAAGCTGATGCTTCTACTAACTTGAATAGTAGAGGACGTTG
GGTCTCAAACATCAGCAGGTCTGCCGAGATTGAGGAGGAAAAACAATCTG
ACGCTGGTAATAAACGAAAAATGCTGTTTGATGAGGTAAATAATAAAAAA
AGACTTGAGAGAGAAGCACTTCCTTCTGATTTACATGACAAGACAAAGAC
GTCTCATATTTCCATAACAACAACGGAAGGCTCGACTGCTGAAAATGAAG
ATGTGGCGGAGTCTGAAGTTGAGGGTTCAACCTCAAGGATGGTTTCTCAC
CAAGATGATGGCTCCAAACGATACATTACAGTTGGTGGTTCCTCTGAGGT
TCCAAAGGAGGTTCGGGGGTTTCCTGATTCGAGTGTTGTAGACGCGCATG
GACAAAAGAGGTTTAATGGTTCTTCAGAAAATGAATTTAAGGTCGGAAAC
ATAAGTTATGGCGTTCCATTCTCAGTTCAACCAATGAACATTATGAATAT
ACCTTACACCATATGCTGTGCGGGAGGCTAACTCAGCTGGAGTCCCTGGC
ACATCTGTAGTTGGCATGACACAGAAGATGCCTACTGGCAGTGGTGAGCG
ATCAGGAGCCCAGCCTGTGAACCCTGGAAACACACCGGTTATGTTTGGCT
ACTCNGCTGTCCCAACTTCCATGGTTGAAAAGATATTCCATGGGGTTTGG
TCCCTCAGCTCAGCAATCCACCTTCTTATGCTGGTAGAGGCCACAAACTC
CGATAGCATAGGGATGGATAAGAATTCCTCAGCTACATGGCATCATTGGA
CGTATTCTCCG
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