EY732177

Overview
NameEY732177
Unique NameEY732177
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length871
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY732177 vs. ExPASy Swiss-Prot
Match: ESTR_ACIAD (HTH-type transcriptional regulator estR OS=Acinetobacter sp. (strain ADP1) GN=estR PE=4 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.866e-11
Identity = 48/155 (30.97%), Postives = 75/155 (48.39%), Query Frame = 1 
Query:  274 IKQLKFLIALDETRHFGQAAARCHITQPTXXXXXXXXXXXXXXXXVNRGQRFEGFTAPGERVLAWARTVLAAYDGLQAEAAACRGNLVGTLRLXVVP-LSSFDPLALMQKLHKEHPSLRFELSAXSSEQILEQLASNRLELGVSYLERLDAEPFD 735
            ++QL +L+ L ET HF +AA R  +TQ T                V R ++    T  GE+V+A AR +LA    L   +      L G L L ++P ++ F    L+ ++HK+ P ++  L    SE+I+E+L    L++ V  L      PFD
Sbjct:    7 LRQLSYLVTLSETLHFTEAARRSFVTQSTLSGGIMELERLLGGVLVERDRQNVRLTPLGEQVVARARVLLADAQDLMRLSREMSEPLTGDLHLGIIPTIAPFILTQLLDEVHKQLPKIQLHLHEAQSEKIVERLEHGNLDMVVLAL------PFD 155
The following BLAST results are available for this feature:
BLAST of EY732177 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
ESTR_ACIAD1.866e-1130.97HTH-type transcriptional regulator estR OS=Acineto... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C3-704-056-G09-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY732177 ID=EY732177; Name=EY732177; organism=Citrus sinensis; type=EST; length=871bp
GTGGTTTGCACATTGGGGTTACCCAACCCAACCTTGGCCACGTGATCTTT
TAACTGCTCGCTCGCGTTGGCATTACCCGGCGTCAACAGATCAATCAACT
TCTCGCCTGCTTCCTTAACAAAGCTAAAAATACTCATGGTGCGCTCTCCT
TGGGATTTAATTTCCAGATGCCAAAGACTAGACCAGTCCTACAGAATTGG
GTTCCAGCCTGACCAAAGACCCAAACACGCTAGAATCCCACCGCATTGGA
ATAAGCCCGGAGCGAAGATGGACATCAAACAGCTGAAATTCCTCATCGCC
CTCGACGAAACCCGTCACTTTGGCCAGGCGGCGGCGCGTTGCCACATTAC
CCAGCCGACCCTGTCGATGCGCCTGCGCAGCCTGGAAGAAGAGCTGCAGC
TGCCGCTGGTCAATCGCGGCCAGCGTTTCGAAGGCTTTACCGCCCCCGGC
GAACGCGTACTGGCCTGGGCCCGCACGGTGCTGGCGGCCTATGACGGTTT
GCAGGCCGAGGCCGCTGCTTGTCGCGGCAACCTGGTGGGTACCTTGCGCC
TGNGCGTGGTGCCGTTGTCGAGTTTCGATCCACTGGCATTGATGCAGAAG
CTGCACAAGGAACACCCGAGCCTGCGCTTTGAGTTGTCCGCGTNAAGCTC
CGAGCAAATCCTCGAACAACTGGCGAGCAATCGCCTGGAACTCGGCGTGT
CGTACCTCGAACGCCTGGACGCCGAGCCGTTCGACTTCCTGGCCTGGGGC
GAAACCGCAATGGCCTGCTGTACGACCACGGTTCTTCCACTTCGGTGACA
ACCCCTGAGCTGGGAACACTGATTGAACTGCCCTGGGGCTGCCCCCAAGG
GGGATGGCTTTGCCAGTTCCT
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