EY756286

Overview
NameEY756286
Unique NameEY756286
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length931
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY756286 vs. ExPASy Swiss-Prot
Match: SYDC_PONAB (Aspartyl-tRNA synthetase, cytoplasmic OS=Pongo abelii GN=DARS PE=2 SV=1)

HSP 1 Score: 166.007 bits (419), Expect = 2.759e-40
Identity = 77/119 (64.71%), Postives = 95/119 (79.83%), Query Frame = 1
Query:  115 EYGPEFYILHRYPLAVRPFYTMPCHDNSLYSNSFDVFIRGEEIISGAQRIHIPEFLAERAQACGIDVKTISTYIDSFRYGAPPHGGFGVGLERVVMLFCGLNNIRKTSLYPRDPLRIAP 471
            +Y  +FYIL +YPLAVRPFYTMP   N   SNS+D+F+RGEEI+SGAQRIH P+ L ERA   GID++ I  YIDSFR+GAPPH G G+GLERV MLF GL+N+R+TS++PRDP R+ P
Sbjct:  383 KYDTDFYILDKYPLAVRPFYTMPDPRNPKQSNSYDMFMRGEEILSGAQRIHDPQLLTERALHHGIDLEKIKAYIDSFRFGAPPHAGGGIGLERVTMLFLGLHNVRQTSMFPRDPKRLTP 501          
BLAST of EY756286 vs. ExPASy Swiss-Prot
Match: SYDC_HUMAN (Aspartyl-tRNA synthetase, cytoplasmic OS=Homo sapiens GN=DARS PE=1 SV=2)

HSP 1 Score: 166.007 bits (419), Expect = 2.759e-40
Identity = 77/119 (64.71%), Postives = 95/119 (79.83%), Query Frame = 1
Query:  115 EYGPEFYILHRYPLAVRPFYTMPCHDNSLYSNSFDVFIRGEEIISGAQRIHIPEFLAERAQACGIDVKTISTYIDSFRYGAPPHGGFGVGLERVVMLFCGLNNIRKTSLYPRDPLRIAP 471
            +Y  +FYIL +YPLAVRPFYTMP   N   SNS+D+F+RGEEI+SGAQRIH P+ L ERA   GID++ I  YIDSFR+GAPPH G G+GLERV MLF GL+N+R+TS++PRDP R+ P
Sbjct:  383 KYDTDFYILDKYPLAVRPFYTMPDPRNPKQSNSYDMFMRGEEILSGAQRIHDPQLLTERALHHGIDLEKIKAYIDSFRFGAPPHAGGGIGLERVTMLFLGLHNVRQTSMFPRDPKRLTP 501          
BLAST of EY756286 vs. ExPASy Swiss-Prot
Match: SYDC_RAT (Aspartyl-tRNA synthetase, cytoplasmic OS=Rattus norvegicus GN=Dars PE=2 SV=1)

HSP 1 Score: 165.622 bits (418), Expect = 3.604e-40
Identity = 76/119 (63.87%), Postives = 95/119 (79.83%), Query Frame = 1
Query:  115 EYGPEFYILHRYPLAVRPFYTMPCHDNSLYSNSFDVFIRGEEIISGAQRIHIPEFLAERAQACGIDVKTISTYIDSFRYGAPPHGGFGVGLERVVMLFCGLNNIRKTSLYPRDPLRIAP 471
            +Y  +FY+L +YPLAVRPFYTMP   N   SNS+D+F+RGEEI+SGAQRIH P+ L ERA   GID++ I  YIDSFR+GAPPH G G+GLERV MLF GL+N+R+TS++PRDP R+ P
Sbjct:  383 KYDTDFYVLDKYPLAVRPFYTMPDPRNPKQSNSYDMFMRGEEILSGAQRIHDPQLLTERALHHGIDLEKIKAYIDSFRFGAPPHAGGGIGLERVTMLFLGLHNVRQTSMFPRDPKRLTP 501          
BLAST of EY756286 vs. ExPASy Swiss-Prot
Match: SYDC_MOUSE (Aspartyl-tRNA synthetase, cytoplasmic OS=Mus musculus GN=Dars PE=2 SV=1)

HSP 1 Score: 165.622 bits (418), Expect = 3.604e-40
Identity = 76/119 (63.87%), Postives = 95/119 (79.83%), Query Frame = 1
Query:  115 EYGPEFYILHRYPLAVRPFYTMPCHDNSLYSNSFDVFIRGEEIISGAQRIHIPEFLAERAQACGIDVKTISTYIDSFRYGAPPHGGFGVGLERVVMLFCGLNNIRKTSLYPRDPLRIAP 471
            +Y  +FY+L +YPLAVRPFYTMP   N   SNS+D+F+RGEEI+SGAQRIH P+ L ERA   GID++ I  YIDSFR+GAPPH G G+GLERV MLF GL+N+R+TS++PRDP R+ P
Sbjct:  383 KYDTDFYVLDKYPLAVRPFYTMPDPRNPKQSNSYDMFMRGEEILSGAQRIHDPQLLTERALHHGIDLEKIKAYIDSFRFGAPPHAGGGIGLERVTMLFLGLHNVRQTSMFPRDPKRLTP 501          
BLAST of EY756286 vs. ExPASy Swiss-Prot
Match: SYDC_BOVIN (Aspartyl-tRNA synthetase, cytoplasmic OS=Bos taurus GN=DARS PE=2 SV=1)

HSP 1 Score: 164.851 bits (416), Expect = 6.147e-40
Identity = 76/119 (63.87%), Postives = 95/119 (79.83%), Query Frame = 1
Query:  115 EYGPEFYILHRYPLAVRPFYTMPCHDNSLYSNSFDVFIRGEEIISGAQRIHIPEFLAERAQACGIDVKTISTYIDSFRYGAPPHGGFGVGLERVVMLFCGLNNIRKTSLYPRDPLRIAP 471
            +Y  +FYIL +YPLAVRPFYTMP   N   SNS+D+F+RGEEI+SGAQRIH P+ + ERA   GID++ I  YIDSFR+GAPPH G G+GLERV MLF GL+N+R+TS++PRDP R+ P
Sbjct:  383 KYDTDFYILDKYPLAVRPFYTMPDPRNPKQSNSYDMFMRGEEILSGAQRIHDPQLVTERALHHGIDLEKIKAYIDSFRFGAPPHAGGGIGLERVTMLFLGLHNVRQTSMFPRDPKRLTP 501          
BLAST of EY756286 vs. ExPASy Swiss-Prot
Match: SYDC_CAEEL (Aspartyl-tRNA synthetase, cytoplasmic OS=Caenorhabditis elegans GN=drs-1 PE=2 SV=1)

HSP 1 Score: 156.377 bits (394), Expect = 2.186e-37
Identity = 71/119 (59.66%), Postives = 92/119 (77.31%), Query Frame = 1
Query:  115 EYGPEFYILHRYPLAVRPFYTMPCHDNSLYSNSFDVFIRGEEIISGAQRIHIPEFLAERAQACGIDVKTISTYIDSFRYGAPPHGGFGVGLERVVMLFCGLNNIRKTSLYPRDPLRIAP 471
            +Y  +FY+L ++PL+VRPFYTMP   +  YSNS+D+F+RGEEI+SGAQRIH  + L ERA+   +D+  I +YIDSF+YG PPH G G+GLERV MLF GL+NIR  SL+PRDP R+ P
Sbjct:  413 KYSTDFYVLDKFPLSVRPFYTMPDAHDERYSNSYDMFMRGEEILSGAQRIHDADMLVERAKHHQVDLAKIQSYIDSFKYGCPPHAGGGIGLERVTMLFLGLHNIRLASLFPRDPKRLTP 531          
BLAST of EY756286 vs. ExPASy Swiss-Prot
Match: SYDC1_DICDI (Aspartyl-tRNA synthetase, cytoplasmic 1 OS=Dictyostelium discoideum GN=aspS1 PE=3 SV=1)

HSP 1 Score: 142.124 bits (357), Expect = 4.267e-33
Identity = 70/142 (49.30%), Postives = 98/142 (69.01%), Query Frame = 1
Query:   52 ELILVGNKHRIREE--VGPASFGEYGPEFYILHRYPLAVRPFYTMPCHDNSLYSNSFDVFIRGEEIISGAQRIHIPEFLAERAQACGIDVKTISTYIDSFRYGAPPHGGFGVGLERVVMLFCGLNNIRKTSLYPRDPLRIAP 471
            + I+  N    R+E  +G     ++G +F+I+ ++ + VRPFYTMP  +N  ++N++D+F+RGEEI SGAQRIH PE L + A++ G+ ++ I  YIDSF+YG   H G GVGLERVVML+ GL NIRK S  PRDP R+ P
Sbjct:  435 DYIVKDNDFNTRQEKRLGKIIKEKFGVDFFIVDKFHVEVRPFYTMPDPNNPQWANAYDLFMRGEEICSGAQRIHDPELLEKSAKSHGVVIEDIQGYIDSFKYGCSQHAGGGVGLERVVMLYLGLGNIRKASFCPRDPTRLTP 576          
BLAST of EY756286 vs. ExPASy Swiss-Prot
Match: SYDC_YEAST (Aspartyl-tRNA synthetase, cytoplasmic OS=Saccharomyces cerevisiae GN=DPS1 PE=1 SV=3)

HSP 1 Score: 139.813 bits (351), Expect = 2.118e-32
Identity = 67/121 (55.37%), Postives = 84/121 (69.42%), Query Frame = 1
Query:  115 EYGPEFYILHRYPLAVRPFYTMPCHDNSLYSNSFDVFIRGEEIISGAQRIHIPEFLAERAQACGIDVKT--ISTYIDSFRYGAPPHGGFGVGLERVVMLFCGLNNIRKTSLYPRDPLRIAP 471
            +Y  +FYIL ++PL +RPFYTMP   N  YSNS+D F+RGEEI+SGAQRIH    L ER +A G+  +   +  Y D F YG PPH G G+GLERVVM +  L NIR+ SL+PRDP R+ P
Sbjct:  437 KYDTDFYILDKFPLEIRPFYTMPDPANPKYSNSYDFFMRGEEILSGAQRIHDHALLQERMKAHGLSPEDPGLKDYCDGFSYGCPPHAGGGIGLERVVMFYLDLKNIRRASLFPRDPKRLRP 557          
BLAST of EY756286 vs. ExPASy Swiss-Prot
Match: SYDC_SCHPO (Aspartyl-tRNA synthetase, cytoplasmic OS=Schizosaccharomyces pombe GN=dps1 PE=1 SV=1)

HSP 1 Score: 137.887 bits (346), Expect = 8.047e-32
Identity = 64/120 (53.33%), Postives = 85/120 (70.83%), Query Frame = 1
Query:  115 EYGPEFYILHRYPLAVRPFYTMPCHDNSLYSNSFDVFIRGEEIISGAQRIHIPEFLAERAQACGIDVKT-ISTYIDSFRYGAPPHGGFGVGLERVVMLFCGLNNIRKTSLYPRDPLRIAP 471
            +Y  +FY++ +YP +VRPFYTMP  ++  YSNS+D F++G+EI+SGAQRIH PE L ER +A G+     +  YID+F  G PPH G G+GLERVVM +  L NIR  S +PRDP R+ P
Sbjct:  461 KYHTDFYVIDKYPSSVRPFYTMPDPEDPRYSNSYDFFMKGQEIMSGAQRIHDPELLVERMKALGVSPDVGLQQYIDAFAIGCPPHAGGGIGLERVVMFYLNLPNIRLASSFPRDPKRLLP 580          
BLAST of EY756286 vs. ExPASy Swiss-Prot
Match: SYD_THEAC (Aspartyl-tRNA synthetase OS=Thermoplasma acidophilum GN=aspS PE=3 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 3.738e-29
Identity = 58/114 (50.88%), Postives = 81/114 (71.05%), Query Frame = 1
Query:  130 FYILHRYPLAVRPFYTMPCHDNSLYSNSFDVFIRGEEIISGAQRIHIPEFLAERAQACGIDVKTISTYIDSFRYGAPPHGGFGVGLERVVMLFCGLNNIRKTSLYPRDPLRIAP 471
            FY +  +P +VRPFYTMP  ++   +NSFD+  R  E+ SGAQR+H P+ L +R     +DVK+   Y+D+F+YG PPH G+G+GLER+ M+  GLNNIR+T+L+PRD  RI P
Sbjct:  315 FYFITEWPSSVRPFYTMPKSEDPRLTNSFDLQYREIEVTSGAQRVHDPKMLIQRFNEKKLDVKSFQFYVDAFKYGMPPHAGWGLGLERLTMILLGLNNIRETTLFPRDRTRIVP 428          
The following BLAST results are available for this feature:
BLAST of EY756286 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 160
Match NameE-valueIdentityDescription
SYDC_PONAB2.759e-4064.71Aspartyl-tRNA synthetase, cytoplasmic OS=Pongo abe... [more]
SYDC_HUMAN2.759e-4064.71Aspartyl-tRNA synthetase, cytoplasmic OS=Homo sapi... [more]
SYDC_RAT3.604e-4063.87Aspartyl-tRNA synthetase, cytoplasmic OS=Rattus no... [more]
SYDC_MOUSE3.604e-4063.87Aspartyl-tRNA synthetase, cytoplasmic OS=Mus muscu... [more]
SYDC_BOVIN6.147e-4063.87Aspartyl-tRNA synthetase, cytoplasmic OS=Bos tauru... [more]
SYDC_CAEEL2.186e-3759.66Aspartyl-tRNA synthetase, cytoplasmic OS=Caenorhab... [more]
SYDC1_DICDI4.267e-3349.30Aspartyl-tRNA synthetase, cytoplasmic 1 OS=Dictyos... [more]
SYDC_YEAST2.118e-3255.37Aspartyl-tRNA synthetase, cytoplasmic OS=Saccharom... [more]
SYDC_SCHPO8.047e-3253.33Aspartyl-tRNA synthetase, cytoplasmic OS=Schizosac... [more]
SYD_THEAC3.738e-2950.88Aspartyl-tRNA synthetase OS=Thermoplasma acidophil... [more]

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Properties
Property NameValue
Genbank descriptionCS13-C1-001-006-H01-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY756286 ID=EY756286; Name=EY756286; organism=Citrus sinensis; type=EST; length=931bp
AAATGGTAGCCTGCAGTACCGGNCCGGAATTCGGCCGTTTAGAGGGCGNG
CGAATTGATCCTTGTCGGAAATAAACACAGAATCAGAGAGGAAGTTGGGC
CAGCTAGTTTTGGAGAATATGGCCCTGAATTCTATATACTCCACCGATAT
CCTTTGGCTGTTAGGCCATTCTATACCATGCCCTGCCATGACAATTCTCT
TTACAGCAACTCATTTGATGTCTTTATTAGAGGTGAAGAGATAATTTCAG
GTGCTCAACGTATTCATATACCAGAGTTCTTAGCGGAGCGTGCGCAGGCA
TGTGGCATTGATGTTAAGACAATATCAACATATATTGATTCTTTCAGATA
TGGTGCACCTCCTCATGGTGGATTTGGAGTGGGATTGGAGCGTGTGGTGA
TGCTTTTCTGTGGTCTTAACAACATTCGTAAAACATCACTCTACCCACGT
GATCCACTTAGGATTGCCCCGTGATGATCTGCTTCAGCTATCAACCTGCG
TGTTATAGATTGCTCTATTTCTACTTTAAACTATTTTCGTATGAAATGAT
CATCTATATGCTTCACTCATTTTTGCATCCATTTTAATCCGTGCCAATGT
ATAATTGCTGTTTGAGATGGTATCCATAACGTTTTATATCCAGGAACGGG
ATTCAGGATACTCATCAATGACGCTTGAAATAACGCCTTCAAACCCGCTC
TGCCTTACGTAAACACGGACAAAAAAAAAAAAAGGCGGGCGCTTCTTAAG
ACTCCAGCTATCTAACCGGGCCAGGCAACTCCTACCCCTCTCATAGGTGC
CCCTAATTCGATTCCGGGCCTCTGTTTTTCACGGCGGGAATGGGAAACCC
CTGGCGTTACCAATATATCGCCCTTGAGAAATTCTCCCCTCCCCTACTGG
GTAAAAACGAAAGGCCCCGCCGTTCGCCCTT
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