EY756281

Overview
NameEY756281
Unique NameEY756281
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length898
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig13320 contig Csv1_Contig13320:1..899. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY756281 vs. ExPASy Swiss-Prot
Match: IAA13_ARATH (Auxin-responsive protein IAA13 OS=Arabidopsis thaliana GN=IAA13 PE=2 SV=2)

HSP 1 Score: 174.866 bits (442), Expect = 5.657e-43
Identity = 86/127 (67.72%), Postives = 101/127 (79.53%), Query Frame = 2
Query:  116 NEKAHLGFVKVNMDGVPIGRKVDLNAHASYESLAQTLEEMFLASTPAINSIGGEKDLATKAFKLLDGLSEFVLTYEDKEGDWMLVGDVPWRMFISSIKRLRIMRTSEANGLGPRFQPRNDRQRAKPV 496
            N K  +GF+KVNMDGV IGRKVDLNAH+SYE+LAQTLE+MF  + P    +  +    TK  +LLDG SEFVLTYEDKEGDWMLVGDVPWRMFI+S+KRLR+M+TSEANGL  R Q  N+RQR +PV
Sbjct:  124 NGKVQVGFIKVNMDGVAIGRKVDLNAHSSYENLAQTLEDMFFRTNPGTVGLTSQ---FTKPLRLLDGSSEFVLTYEDKEGDWMLVGDVPWRMFINSVKRLRVMKTSEANGLAARNQEPNERQRKQPV 247          
BLAST of EY756281 vs. ExPASy Swiss-Prot
Match: IAA12_ARATH (Auxin-responsive protein IAA12 OS=Arabidopsis thaliana GN=IAA12 PE=1 SV=1)

HSP 1 Score: 164.081 bits (414), Expect = 9.985e-40
Identity = 85/122 (69.67%), Postives = 94/122 (77.05%), Query Frame = 2
Query:  131 LGFVKVNMDGVPIGRKVDLNAHASYESLAQTLEEMFLASTPAINSIGGEKDLATKAFKLLDGLSEFVLTYEDKEGDWMLVGDVPWRMFISSIKRLRIMRTSEANGLGPRFQPRNDRQRAKPV 496
            LGFVKVNMDGV IGRKVD+ AH+SYE+LAQTLEEMF   T      G       K  +LLDG S+FVLTYEDKEGDWMLVGDVPWRMFI+S+KRLRIM TSEA+GL PR Q + DRQR  PV
Sbjct:  124 LGFVKVNMDGVGIGRKVDMRAHSSYENLAQTLEEMFFGMT------GTTCREKVKPLRLLDGSSDFVLTYEDKEGDWMLVGDVPWRMFINSVKRLRIMGTSEASGLAPRRQEQKDRQRNNPV 239          
BLAST of EY756281 vs. ExPASy Swiss-Prot
Match: IAA10_ORYSJ (Auxin-responsive protein IAA10 OS=Oryza sativa subsp. japonica GN=IAA10 PE=2 SV=2)

HSP 1 Score: 137.887 bits (346), Expect = 7.663e-32
Identity = 70/110 (63.64%), Postives = 84/110 (76.36%), Query Frame = 2
Query:  134 GFVKVNMDGVPIGRKVDLNAHASYESLAQTLEEMFLASTPAINSIGGEKDLATKAFKLLDGLSEFVLTYEDKEGDWMLVGDVPWRMFISSIKRLRIMRTSEANGLGPRFQ 463
            G+VKVNMDG  IGRKVDLNAH SY++LA  LE MF  + P+I          T + KLLD  +E+ LTYED++GDWMLVGDVPW MF+SS+KRLRIMRTS+ANGLG R+Q
Sbjct:  164 GWVKVNMDGEVIGRKVDLNAHRSYKTLALALELMF--TKPSIGLCASHN---TNSLKLLDNSAEYQLTYEDRDGDWMLVGDVPWEMFVSSVKRLRIMRTSDANGLGQRYQ 268          
BLAST of EY756281 vs. ExPASy Swiss-Prot
Match: IAA10_ORYSI (Auxin-responsive protein IAA10 OS=Oryza sativa subsp. indica GN=IAA10 PE=2 SV=2)

HSP 1 Score: 137.887 bits (346), Expect = 7.663e-32
Identity = 70/110 (63.64%), Postives = 84/110 (76.36%), Query Frame = 2
Query:  134 GFVKVNMDGVPIGRKVDLNAHASYESLAQTLEEMFLASTPAINSIGGEKDLATKAFKLLDGLSEFVLTYEDKEGDWMLVGDVPWRMFISSIKRLRIMRTSEANGLGPRFQ 463
            G+VKVNMDG  IGRKVDLNAH SY++LA  LE MF  + P+I          T + KLLD  +E+ LTYED++GDWMLVGDVPW MF+SS+KRLRIMRTS+ANGLG R+Q
Sbjct:  164 GWVKVNMDGEVIGRKVDLNAHRSYKTLALALELMF--TKPSIGLCASHN---TNSLKLLDNSAEYQLTYEDRDGDWMLVGDVPWEMFVSSVKRLRIMRTSDANGLGQRYQ 268          
BLAST of EY756281 vs. ExPASy Swiss-Prot
Match: IAA11_ARATH (Auxin-responsive protein IAA11 OS=Arabidopsis thaliana GN=IAA11 PE=2 SV=1)

HSP 1 Score: 134.035 bits (336), Expect = 1.107e-30
Identity = 68/117 (58.12%), Postives = 81/117 (69.23%), Query Frame = 2
Query:   95 NKTNNIFNEKAHLGFVKVNMDGVPIGRKVDLNAHASYESLAQTLEEMFLASTPAINSIGGEKDLATKAFKLLDGLSEFVLTYEDKEGDWMLVGDVPWRMFISSIKRLRIMRTSEANG 445
            NK  +   +  +  FVKV MDG+PIGRK+DLNAH  YESL+ TLEEMFL       ++  +  + T    L DG S  VLTYEDKEGDWMLVGDVPW MFI S++RLRIM+TSEA G
Sbjct:  124 NKNRSDSTKMRNSMFVKVTMDGIPIGRKIDLNAHKCYESLSNTLEEMFLKPKLGSRTLETDGHMETPVKILPDGSSGLVLTYEDKEGDWMLVGDVPWGMFIGSVRRLRIMKTSEATG 240          
BLAST of EY756281 vs. ExPASy Swiss-Prot
Match: IAA26_ARATH (Auxin-responsive protein IAA26 OS=Arabidopsis thaliana GN=IAA26 PE=2 SV=2)

HSP 1 Score: 116.701 bits (291), Expect = 1.828e-25
Identity = 57/100 (57.00%), Postives = 72/100 (72.00%), Query Frame = 2
Query:  137 FVKVNMDGVPIGRKVDLNAHASYESLAQTLEEMFLASTPAINSIGGEKDLATKAFKLLDGLSEFVLTYEDKEGDWMLVGDVPWRMFISSIKRLRIMRTSE 436
            FVK+NMDGVPIGRKVDLNA+ SYE L+  ++++F     A   I   +        LLDG  EF LTYED EGD MLVGDVPW+MF+SS+KRLR++++SE
Sbjct:  153 FVKINMDGVPIGRKVDLNAYNSYEQLSFVVDKLFRGLLAAQRDISDGQGEEKPIIGLLDGKGEFTLTYEDNEGDKMLVGDVPWQMFVSSVKRLRVIKSSE 252          
BLAST of EY756281 vs. ExPASy Swiss-Prot
Match: IAA10_ARATH (Auxin-responsive protein IAA10 OS=Arabidopsis thaliana GN=IAA10 PE=2 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 5.319e-25
Identity = 60/107 (56.07%), Postives = 76/107 (71.03%), Query Frame = 2
Query:  140 VKVNMDGVPIGRKVDLNAHASYESLAQTLEEMFLASTPAI---NSIGGEKDLATKAFKLLDGLSEFVLTYEDKEGDWMLVGDVPWRMFISSIKRLRIMRTSEANGLG 451
            VKV MDGV IGRKVDLNA  SY +L +TL+ MF      +   N+ G +    T   KLLDG SE+++TY+DK+GDWMLVGDVPW+MF+ S+ RLRIM+TS   G+G
Sbjct:  154 VKVTMDGVIIGRKVDLNALDSYAALEKTLDLMFFQIPSPVTRSNTQGYKTIKETCTSKLLDGSSEYIITYQDKDGDWMLVGDVPWQMFLGSVTRLRIMKTSIGAGVG 260          
BLAST of EY756281 vs. ExPASy Swiss-Prot
Match: IAA18_ARATH (Auxin-responsive protein IAA18 OS=Arabidopsis thaliana GN=IAA18 PE=2 SV=2)

HSP 1 Score: 113.235 bits (282), Expect = 2.021e-24
Identity = 60/104 (57.69%), Postives = 76/104 (73.08%), Query Frame = 2
Query:  137 FVKVNMDGVPIGRKVDLNAHASYESLAQTLEEMF----LASTPAINSIGGEKDLATKAFKLLDGLSEFVLTYEDKEGDWMLVGDVPWRMFISSIKRLRIMRTSE 436
            FVK+NM GVPIGRKVDL+AH SYE L+ T++++F     A     +SI  EK +      LLDG  E+ LTYED EGD MLVGDVPW+MF+SS+KRLR+++TSE
Sbjct:  151 FVKINMYGVPIGRKVDLSAHNSYEQLSFTVDKLFRGLLAAQRDFPSSIEDEKPITG----LLDGNGEYTLTYEDNEGDKMLVGDVPWQMFVSSVKRLRVIKTSE 250          
BLAST of EY756281 vs. ExPASy Swiss-Prot
Match: IAA23_ORYSJ (Auxin-responsive protein IAA23 OS=Oryza sativa subsp. japonica GN=IAA23 PE=2 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 2.640e-24
Identity = 62/124 (50.00%), Postives = 78/124 (62.90%), Query Frame = 2
Query:   98 KTNNIFNEKAHLGFVKVNMDGVPIGRKVDLNAHASYESLAQTLEEMFLASTPAINSIGGEKDLATKAFKLLDGLSEFVLTYEDKEGDWMLVGDVPWRMFISSIKRLRIMRTSEANGLGPRFQPR 469
            + N +  + A    VKV +DG P  RKVDL AHA Y  L + L  MF AS  A+   GG     TK   L+ G +E+V TYEDK+GDWMLVGDVPW+MF+ S KR+R+M++SEA  L PR   R
Sbjct:   72 RRNALREDSARAKLVKVAVDGAPYLRKVDLAAHAGYAPLLRALHGMF-ASCLAVRGGGGGDGEGTKLVDLVTG-AEYVPTYEDKDGDWMLVGDVPWKMFVESCKRIRLMKSSEAVNLSPRRSSR 193          
BLAST of EY756281 vs. ExPASy Swiss-Prot
Match: IAA7_ARATH (Auxin-responsive protein IAA7 OS=Arabidopsis thaliana GN=IAA7 PE=1 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 5.881e-24
Identity = 63/135 (46.67%), Postives = 82/135 (60.74%), Query Frame = 2
Query:   89 NGNKTNNIFNEKAHLGFVKVNMDGVPIGRKVDLNAHASYESLAQTLEEMFLASTPAINSIGGEKDLATKAFKLLDGL--SEFVLTYEDKEGDWMLVGDVPWRMFISSIKRLRIMRTSEANGLGPRFQPRNDRQRA 487
            +  K  N     A  G VKV+MDG P  RKVDL  + SY+ L+  L +MF + T       G  D   ++ KL++ L  SE+V +YEDK+GDWMLVGDVPW MF+ S KRLRIM+ SEA GL PR   +  + R+
Sbjct:  110 SSEKAGNFGGGAAGAGLVKVSMDGAPYLRKVDLKMYKSYQDLSDALAKMFSSFTMGNYGAQGMIDFMNES-KLMNLLNSSEYVPSYEDKDGDWMLVGDVPWEMFVESCKRLRIMKGSEAVGLAPRAMEKYCKNRS 243          
The following BLAST results are available for this feature:
BLAST of EY756281 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 69
Match NameE-valueIdentityDescription
IAA13_ARATH5.657e-4367.72Auxin-responsive protein IAA13 OS=Arabidopsis thal... [more]
IAA12_ARATH9.985e-4069.67Auxin-responsive protein IAA12 OS=Arabidopsis thal... [more]
IAA10_ORYSJ7.663e-3263.64Auxin-responsive protein IAA10 OS=Oryza sativa sub... [more]
IAA10_ORYSI7.663e-3263.64Auxin-responsive protein IAA10 OS=Oryza sativa sub... [more]
IAA11_ARATH1.107e-3058.12Auxin-responsive protein IAA11 OS=Arabidopsis thal... [more]
IAA26_ARATH1.828e-2557.00Auxin-responsive protein IAA26 OS=Arabidopsis thal... [more]
IAA10_ARATH5.319e-2556.07Auxin-responsive protein IAA10 OS=Arabidopsis thal... [more]
IAA18_ARATH2.021e-2457.69Auxin-responsive protein IAA18 OS=Arabidopsis thal... [more]
IAA23_ORYSJ2.640e-2450.00Auxin-responsive protein IAA23 OS=Oryza sativa sub... [more]
IAA7_ARATH5.881e-2446.67Auxin-responsive protein IAA7 OS=Arabidopsis thali... [more]

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Properties
Property NameValue
Genbank descriptionCS13-C1-001-006-F11-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY756281 ID=EY756281; Name=EY756281; organism=Citrus sinensis; type=EST; length=898bp
CCACGCGTCCGAAGCTCCAATATCTGAAGAAGAAAAAGTGGCCGATGAAA
AAGACAAATCAAAAGATGCTTCGAAGAAGAAAATTTGCAATGGTAACAAA
ACCAATAATATTTTCAATGAGAAAGCTCATCTTGGGTTTGTTAAGGTGAA
TATGGATGGAGTTCCAATAGGGAGGAAAGTGGATTTGAATGCTCATGCCT
CGTATGAGTCTTTAGCTCAAACTTTGGAGGAGATGTTTTTAGCATCCACC
CCAGCTATCAATTCCATAGGTGGAGAGAAGGATCTTGCAACAAAGGCCTT
TAAGCTTTTGGATGGATTGTCCGAGTTTGTGCTCACTTATGAAGATAAAG
AAGGAGATTGGATGCTTGTCGGAGATGTACCTTGGAGGATGTTTATCAGC
TCAATAAAAAGGCTTCGAATCATGAGGACCTCCGAGGCTAATGGACTTGG
CCCAAGATTCCAACCTAGGAATGATAGACAAAGAGCCAAGCCTGTTTAGT
GCTGTCCTGTCATTCAAAGTTCCTGAAAGATGAAGAAACCAACATTTGCA
AACTGAAGCTAAAGAATAGTAGACAAGTTGTCAACTTTGAGCATTTTGCC
CAATGTTTTTCTCTTACCTTTTTTCGCCCTCTGTCTTCCTTTTAGCATTA
CTCTCAGCTGTTATCTGGTCCTTGCTGGTCCATTTTTTTTTTTTTTTTTG
GGGGTTTGGTAAGCCATATTCATTTTTCGTTTTCTCTCTTATATAGGGCT
ACGATACAGGCCTGCTTACTACTTTGATGACCGAATGCTACCTTCGCATA
CTGTAAATATGGAGCACTTGATATCTAGAGTGTTTTCAGTTTGCGCAATG
CAGTGGAGTCTGTTTCTCTNCTGTAAGAAGAAAAGCTTGTGTGTTTTT
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