EY756245
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of EY756245 vs. ExPASy Swiss-Prot
Match: RTNLA_ARATH (Reticulon-like protein B1 OS=Arabidopsis thaliana GN=RTNLB1 PE=1 SV=1) HSP 1 Score: 219.55 bits (558), Expect = 2.784e-67 Identity = 103/146 (70.55%), Postives = 125/146 (85.62%), Query Frame = 1 Query: 211 AFKSKVFRLFGREKPIHHVLGAGKPADIFLWRNKKISAGVLGGATAMWVLFELLEYHLITLVCHISILSLAVLFLWSNASTFINKSPPEIPVVTLPEKFVLEFASALRYEINRALAVLREIASGRDLKKFLGVIAGLWLLSGVGNC 648 + KSKV+RLFGRE+P+H VLG GKPADIF+W+NKK+S GVLGGATA WV+FEL+EYHL+TL+CH+ I+ LAVLFLWSNA+ FINKSPP+IP V +PE+ +L+ AS LR EINR + LREIASGRDLKKFL IAGLW+LS +G C Sbjct: 65 SMKSKVYRLFGREQPVHKVLGGGKPADIFMWKNKKMSGGVLGGATAAWVVFELMEYHLLTLLCHVMIVVLAVLFLWSNATMFINKSPPKIPEVHIPEEPILQLASGLRIEINRGFSSLREIASGRDLKKFLIAIAGLWVLSILGGC 210 HSP 2 Score: 56.225 bits (134), Expect = 2.784e-67 Identity = 26/40 (65.00%), Postives = 31/40 (77.50%), Query Frame = 3 Query: 651 NFVTLFYIVFVLLHTVPVIYEKYEDKIDSFGEKATIENQK 770 NF+TL YI VLL TVP+ Y+KYEDK+D GEKA IE +K Sbjct: 212 NFLTLAYIALVLLFTVPLAYDKYEDKVDPLGEKAMIELKK 251 HSP 3 Score: 22.7126 bits (47), Expect = 2.784e-67 Identity = 9/12 (75.00%), Postives = 10/12 (83.33%), Query Frame = 2 Query: 773 YAVFDEKVLKKV 808 YAV DEKVL K+ Sbjct: 253 YAVLDEKVLSKI 264
BLAST of EY756245 vs. ExPASy Swiss-Prot
Match: RTNLB_ARATH (Reticulon-like protein B2 OS=Arabidopsis thaliana GN=RTNLB2 PE=1 SV=1) HSP 1 Score: 216.083 bits (549), Expect = 1.160e-65 Identity = 99/146 (67.81%), Postives = 125/146 (85.62%), Query Frame = 1 Query: 211 AFKSKVFRLFGREKPIHHVLGAGKPADIFLWRNKKISAGVLGGATAMWVLFELLEYHLITLVCHISILSLAVLFLWSNASTFINKSPPEIPVVTLPEKFVLEFASALRYEINRALAVLREIASGRDLKKFLGVIAGLWLLSGVGNC 648 + KSKV+RLFGRE+P+H VLG GKPADIF+W++KK+S GV GGAT WVLFEL+EYHL+TL+CH+ I++LAVLFLWSNA+ FI+KSPP+IP V +PE+ +L+ AS LR EINR ++ LREIASGRD+KKFL IAGLW+LS +G C Sbjct: 61 SLKSKVYRLFGRERPVHKVLGGGKPADIFMWKDKKMSGGVFGGATVAWVLFELMEYHLLTLLCHVMIVALAVLFLWSNATMFIHKSPPKIPEVHIPEEPLLQLASGLRIEINRGISSLREIASGRDIKKFLSAIAGLWVLSILGGC 206 HSP 2 Score: 55.8398 bits (133), Expect = 1.160e-65 Identity = 25/40 (62.50%), Postives = 32/40 (80.00%), Query Frame = 3 Query: 651 NFVTLFYIVFVLLHTVPVIYEKYEDKIDSFGEKATIENQK 770 +F+TL YI VLL TVP+ Y+KYEDK+DS+GEKA E +K Sbjct: 208 SFLTLAYIALVLLFTVPLFYDKYEDKVDSYGEKAMAELKK 247
BLAST of EY756245 vs. ExPASy Swiss-Prot
Match: RTNLD_ARATH (Reticulon-like protein B4 OS=Arabidopsis thaliana GN=RTNLB4 PE=1 SV=1) HSP 1 Score: 212.231 bits (539), Expect = 5.099e-57 Identity = 102/158 (64.56%), Postives = 123/158 (77.85%), Query Frame = 1 Query: 211 AFKSKVFRLFGREKPIHHVLGAGKPADIFLWRNKKISAGVLGGATAMWVLFELLEYHLITLVCHISILSLAVLFLWSNASTFINKSPPEIPVVTLPEKFVLEFASALRYEINRALAVLREIASGRDLKKFLGVIAGLWLLSGVGNCATS*HYSTLYLF 684 +FKSK++RLFGREKP+H VLG GKPADIFLWRNKK+S GVLG TA WVLFEL EYHL+ +CH +I +LA LFLWSNA TFI+KS P IP V +PE +L+ S LR EINR L +LR IASG+D+KKF+ VIAGLW+LS +G+C Y+ L LF Sbjct: 44 SFKSKIYRLFGREKPVHKVLGGGKPADIFLWRNKKVSGGVLGAVTASWVLFELFEYHLLAFLCHFAIFALAALFLWSNACTFIHKSTPHIPEVHIPEDPILQLVSGLRIEINRGLTLLRNIASGKDVKKFILVIAGLWVLSIIGSC-----YNFLTLF 196 HSP 2 Score: 30.8018 bits (68), Expect = 5.099e-57 Identity = 13/18 (72.22%), Postives = 16/18 (88.89%), Query Frame = 2 Query: 773 YAVFDEKVLKKVLSXIPK 826 YAV DEKVL+KV+S IP+ Sbjct: 232 YAVLDEKVLRKVISKIPR 249
BLAST of EY756245 vs. ExPASy Swiss-Prot
Match: RTNLC_ARATH (Reticulon-like protein B3 OS=Arabidopsis thaliana GN=RTNLB3 PE=1 SV=1) HSP 1 Score: 210.69 bits (535), Expect = 2.090e-55 Identity = 107/161 (66.46%), Postives = 128/161 (79.50%), Query Frame = 1 Query: 211 AFKSKVFRLFGREKPIHHVLGAGKPADIFLWRNKKISAGVLGGATAMWVLFELLEYHLITLVCHISILSLAVLFLWSNASTFINKSPPEIPVVTLPEKFVLEFASALRYEINRALAVLREIASGRDLKKFLGVIAGLWLLSGVG---NCATS*HYSTLYLF 684 + K+K++RLFGRE+P+H + G GKPADIFLWRNKK+S GVLG AT W+LFELLEY+L+TL HISIL+LAVLFLWS+ASTFI+KSP IP V +PE VL+ AS LR EINR VLR+IASGRDLKKFL VIAGLW+LS VG N T + +T+ LF Sbjct: 40 SLKTKIYRLFGREQPLHKLFGGGKPADIFLWRNKKVSGGVLGAATVSWILFELLEYNLLTLFGHISILALAVLFLWSSASTFIHKSPLHIPEVHIPEDVVLQLASGLRIEINRGFTVLRDIASGRDLKKFLLVIAGLWVLSKVGSSCNFLTLIYIATVLLF 200 HSP 2 Score: 26.9498 bits (58), Expect = 2.090e-55 Identity = 12/18 (66.67%), Postives = 13/18 (72.22%), Query Frame = 2 Query: 773 YAVFDEKVLKKVLSXIPK 826 Y FD KVL KV+S IPK Sbjct: 228 YVEFDVKVLSKVMSKIPK 245
BLAST of EY756245 vs. ExPASy Swiss-Prot
Match: RTNLE_ARATH (Reticulon-like protein B5 OS=Arabidopsis thaliana GN=RTNLB5 PE=1 SV=1) HSP 1 Score: 204.912 bits (520), Expect = 1.213e-52 Identity = 105/203 (51.72%), Postives = 140/203 (68.97%), Query Frame = 1 Query: 85 MAEHAPEHESSDKSLVEKITXXXXXXXXXXXXXXXXXXXXXX-AFKSKVFRLFGREKPIHHVLGAGKPADIFLWRNKKISAGVLGGATAMWVLFELLEYHLITLVCHISILSLAVLFLWSNASTFINKSPPEIPVVTLPEKFVLEFASALRYEINRALAVLREIASGRDLKKFLGVIAGLWLLSGVGNCATS*HYSTLYLFCY 690 MAE + +++SL+EKI+ A K+K++R+FGREKP+H VLG GKPAD+FLWR+KK+S VLG ATA+WVLFEL+EYHL++L+CHISIL+L LFLWSNA T INK+ P+IP + +PE+ L AS+LR E+N+A +LR IA GRDLKKFL V+ GLW++S VGN ++ TL C+ Sbjct: 1 MAEEIEKSVPTEESLMEKISEKIHHHDSSSSSESEYEKPDSPSAVKAKIYRMFGREKPVHKVLGGGKPADVFLWRDKKLSGAVLGVATAIWVLFELVEYHLLSLLCHISILALGGLFLWSNAHTLINKTSPQIPEIHVPEEAFLVVASSLRNELNQAFVILRSIALGRDLKKFLMVVVGLWIISVVGNWF---NFLTLVYICF 200 HSP 2 Score: 23.483 bits (49), Expect = 1.213e-52 Identity = 9/12 (75.00%), Postives = 10/12 (83.33%), Query Frame = 2 Query: 773 YAVFDEKVLKKV 808 Y VFDEKVL K+ Sbjct: 232 YVVFDEKVLSKI 243
BLAST of EY756245 vs. ExPASy Swiss-Prot
Match: RTNLF_ARATH (Reticulon-like protein B6 OS=Arabidopsis thaliana GN=RTNLB6 PE=1 SV=1) HSP 1 Score: 196.438 bits (498), Expect = 9.154e-50 Identity = 103/203 (50.74%), Postives = 134/203 (66.01%), Query Frame = 1 Query: 85 MAEHAPEHESSDKSLVEKITXXXXXXXXXXXXXXXXXXXXXX-AFKSKVFRLFGREKPIHHVLGAGKPADIFLWRNKKISAGVLGGATAMWVLFELLEYHLITLVCHISILSLAVLFLWSNASTFINKSPPEIPVVTLPEKFVLEFASALRYEINRALAVLREIASGRDLKKFLGVIAGLWLLSGVGNCATS*HYSTLYLFCY 690 MAE + ++SL+EKI A K+K++RLFGREKP+H VLG G PAD+FLWR+KK+SA VLG ATA+WVLFEL+EYH ++LVCHI I +LA LFL SNA F+NK+PP+IP + + E+ L SALR E+N+A +LR IA GRDLKKFL V+ GLW++S VGN ++ TL C+ Sbjct: 1 MAEELEKSMHKEESLMEKIADKIHDHDSSSSSDSEHEKPESPSALKAKIYRLFGREKPVHKVLGGGLPADVFLWRDKKLSASVLGVATAIWVLFELVEYHFLSLVCHILIFALAALFLLSNAHAFMNKTPPKIPEIHIKEEHFLMIVSALRNELNQAFVILRSIALGRDLKKFLMVVFGLWIISVVGNWF---NFLTLVYICF 200 HSP 2 Score: 22.3274 bits (46), Expect = 9.154e-50 Identity = 9/12 (75.00%), Postives = 10/12 (83.33%), Query Frame = 2 Query: 773 YAVFDEKVLKKV 808 Y VFDEKVL K+ Sbjct: 232 YMVFDEKVLSKL 243
BLAST of EY756245 vs. ExPASy Swiss-Prot
Match: RTNLH_ARATH (Reticulon-like protein B8 OS=Arabidopsis thaliana GN=RTNLB8 PE=1 SV=1) HSP 1 Score: 157.147 bits (396), Expect = 1.187e-37 Identity = 73/143 (51.05%), Postives = 101/143 (70.63%), Query Frame = 1 Query: 220 SKVFRLFGREKPIHHVLGAGKPADIFLWRNKKISAGVLGGATAMWVLFELLEYHLITLVCHISILSLAVLFLWSNASTFINKSPPEIPVVTLPEKFVLEFASALRYEINRALAVLREIASGRDLKKFLGVIAGLWLLSGVGNC 648 S+ RLF R+KPIHHVLG GK AD+ LWRNKKISA VL GATA+WVLFE + +H ++LVC+ +L + F+WSNAS F+N+S +P + LP+ F E A+ E+NR L L+++A +LK+FL + GLW+ + VG+C Sbjct: 40 SRFNRLFDRQKPIHHVLGGGKSADVLLWRNKKISASVLMGATAIWVLFEWINFHFLSLVCYALLLGMIAQFVWSNASGFLNRSQSRVPRLVLPKDFFAEVGVAVGKEVNRGLLFLQDLACKGNLKQFLMAVIGLWVAAMVGSC 182
BLAST of EY756245 vs. ExPASy Swiss-Prot
Match: RTNLG_ARATH (Reticulon-like protein B7 OS=Arabidopsis thaliana GN=RTNLB7 PE=2 SV=2) HSP 1 Score: 144.436 bits (363), Expect = 7.963e-34 Identity = 70/140 (50.00%), Postives = 98/140 (70.00%), Query Frame = 1 Query: 226 VFRLFGREKPIHHVLGAGKPADIFLWRNKKISAGVLGGATAMWVLFELLEYHLITLVCHISILSLAVLFLWSNASTFINKSPPEIPVVTLPEKFVLEFASALRYEINRALAVLREIASGRDLKKFLGVIAGLWLLSGVGN 645 ++R+FGRE+PIH VLG GKPAD+ LWR+KK++ G+L T +W+LF L+T +C SIL L + FLWSNA +NKSP + + +PEK +L+ ASA+ +E+N A A LR IA RD+K F+ + GLWL+S +GN Sbjct: 51 IYRMFGRERPIHMVLGGGKPADVLLWRDKKVTLGLLSAVTVIWLLFGFGGRRLLTSLCRGSILFLLLSFLWSNA---LNKSPENMMDIYIPEKPLLQAASAMTFELNCAFATLRSIALERDIKNFVMAVIGLWLVSVIGN 187
BLAST of EY756245 vs. ExPASy Swiss-Prot
Match: RTNLI_ARATH (Reticulon-like protein B9 OS=Arabidopsis thaliana GN=RTNLB9 PE=2 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 1.091e-30 Identity = 56/140 (40.00%), Postives = 82/140 (58.57%), Query Frame = 1 Query: 223 KVFRLFGREKPIHHVLGAGKPADIFLWRNKKISAGVLGGATAMWVLFELLEYHLITLVCHISILSLAVLFLWSNASTFINKSPPEIPVVTLPEKFVLEFASALRYEINRALAVLREIASGRDLKKFLGVIAGLWLLSGVG 642 K +LF R++ IH + G GK ADI LWR KI+A ++ G + +W L E++EY+ ITL+CH S+ S+ F+WS AS F+N P IP V L E + A + N+ L L ++A GRD F L+++S +G Sbjct: 19 KTTKLFTRQRSIHSIFGGGKVADILLWREPKIAATLVIGVSILWFLMEVVEYNFITLICHASMTSMLFFFIWSTASDFLNWERPLIPEVVLDESSFKQLARSFHVRFNQILTKLLDVACGRDPPLFFLTTISLYIVSIIG 158 HSP 2 Score: 40.0466 bits (92), Expect = 1.091e-30 Identity = 20/48 (41.67%), Postives = 29/48 (60.42%), Query Frame = 3 Query: 651 NFVTLFYIVFVLLHTVPVIYEKYEDKIDSFGEKATIENQKHMQSLMKR 794 NFV L +I FV + T+PV+YE YED +D+ K + M+ L K+ Sbjct: 162 NFVNLLFIGFVSMQTLPVMYEMYEDDVDTAAGKL----MRKMKKLYKK 205
BLAST of EY756245 vs. ExPASy Swiss-Prot
Match: RTNLL_ARATH (Reticulon-like protein B12 OS=Arabidopsis thaliana GN=RTNLB12 PE=2 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 2.039e-25 Identity = 50/138 (36.23%), Postives = 82/138 (59.42%), Query Frame = 1 Query: 232 RLFGREKPIHHVLGAGKPADIFLWRNKKISAGVLGGATAMWVLFELLEYHLITLVCHISILSLAVLFLWSNASTFINKSPPEIPVVTLPEKFVLEFASALRYEINRALAVLREIASGRDLKKFLGVIAGLWLLSGVGN 645 +LF R++ IH +LG G AD+ LWR K +S G++ A W++FE Y + TL+ + +L L++LFLWS +++ +N+ P +P + E E + LR +N+ L V +IA RD + + V L+LLS +G+ Sbjct: 7 KLFNRDRTIHEILGGGIVADVMLWRKKNVSVGIVTVTIASWMVFEAFAYTIFTLISSVLLLLLSILFLWSKSASILNRPSPPLPEFQISEAMAEEASIWLRIHVNKLLQVSHDIAMARDSELYTKVAVSLFLLSLIGS 144 HSP 2 Score: 29.261 bits (64), Expect = 2.039e-25 Identity = 13/29 (44.83%), Postives = 19/29 (65.52%), Query Frame = 3 Query: 645 LCNFVTLFYIVFVLLHTVPVIYEKYEDKI 731 L +F TL + +++ TVP YE+YED I Sbjct: 145 LMDFQTLCHTSVLVVMTVPAFYERYEDYI 173 The following BLAST results are available for this feature:
BLAST of EY756245 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 16
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Sequences
The
following sequences are available for this feature:
EST sequence >EY756245 ID=EY756245; Name=EY756245; organism=Citrus sinensis; type=EST; length=883bpback to top |