EY756239
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of EY756239 vs. ExPASy Swiss-Prot
Match: MED7_DICDI (Putative mediator of RNA polymerase II transcription subunit 7 OS=Dictyostelium discoideum GN=med7 PE=3 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 1.215e-17 Identity = 45/104 (43.27%), Postives = 65/104 (62.50%), Query Frame = 3 Query: 18 LLPGPNIDFKKELRSLNRELQLHILELSDVLVERPSQYARRVEDISLIFKNLHHLLNSLRPHQARATLIHILELQIQRRKQAVEDIKRRREEAQRRLKESLGTL 329 L P +I+ EL+ LNR + + L+L + L+E P Y ++EDISL+F N HHLLNS RPHQAR TL+ I+ QI+++ Q+ E IK+ + + L S L Sbjct: 178 LYPKGDIEPISELKKLNRSILFNYLQLLETLIENPKNYQSKIEDISLLFINFHHLLNSYRPHQARETLLSIMNEQIKQKNQSNESIKKALDICKESLMNSFKNL 281
BLAST of EY756239 vs. ExPASy Swiss-Prot
Match: MED7_AEDAE (Mediator of RNA polymerase II transcription subunit 7 OS=Aedes aegypti GN=MED7 PE=3 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 1.642e-14 Identity = 38/101 (37.62%), Postives = 65/101 (64.36%), Query Frame = 3 Query: 33 NIDFKKELRSLNRELQLHILELSDVLVERPS--QYARRVEDISLIFKNLHHLLNSLRPHQARATLIHILELQIQRRKQAVEDIKRRREEAQRRLKESLGTL 329 + D +KEL+ LN L ++ L+L D+LV P Q A ++ED++L+F ++HHLLN RPHQAR TL ++ELQ ++R++ + + E+ + + + +L Sbjct: 73 HFDRRKELKKLNHSLLVNFLDLIDLLVHNPDSPQRAEKIEDLNLLFVHIHHLLNEFRPHQARETLRVMMELQKRQRQETTQRFQNHLEKVREMVNNAFASL 173
BLAST of EY756239 vs. ExPASy Swiss-Prot
Match: MED7_ANOGA (Mediator of RNA polymerase II transcription subunit 7 OS=Anopheles gambiae GN=MED7 PE=3 SV=2) HSP 1 Score: 78.5666 bits (192), Expect = 2.802e-14 Identity = 39/101 (38.61%), Postives = 65/101 (64.36%), Query Frame = 3 Query: 33 NIDFKKELRSLNRELQLHILELSDVLVERPS--QYARRVEDISLIFKNLHHLLNSLRPHQARATLIHILELQIQRRKQAVEDIKRRREEAQRRLKESLGTL 329 + D +KEL+ LN L ++ L+L D+LV P + A ++ED+SL+F ++HHLLN RPHQAR TL ++ELQ ++R + + + E+ + +K + +L Sbjct: 73 HFDRRKELKKLNHSLLVNFLDLIDLLVHYPDSPRRAEKIEDLSLLFVHIHHLLNEFRPHQARETLRVMMELQKRQRIETAQRFQNHLEKVREMVKNAFASL 173
BLAST of EY756239 vs. ExPASy Swiss-Prot
Match: MED7_PIG (Mediator of RNA polymerase II transcription subunit 7 OS=Sus scrofa GN=MED7 PE=2 SV=2) HSP 1 Score: 76.2554 bits (186), Expect = 1.390e-13 Identity = 37/99 (37.37%), Postives = 61/99 (61.62%), Query Frame = 3 Query: 39 DFKKELRSLNRELQLHILELSDVLVERPSQYAR--RVEDISLIFKNLHHLLNSLRPHQARATLIHILELQIQRRKQAVEDIKRRREEAQRRLKESLGTL 329 D KKELR LN + ++ L+L D+L+ P R ++ED+ L+F ++HHL+N RPHQAR TL ++E+Q ++R + E ++ E ++ L +L Sbjct: 73 DHKKELRKLNMSILINFLDLLDILIRSPGSIKREEKLEDLKLLFVHVHHLINEYRPHQARETLRVMMEVQKRQRLETAERFQKHLERVIEMIQNCLASL 171
BLAST of EY756239 vs. ExPASy Swiss-Prot
Match: MED7_MOUSE (Mediator of RNA polymerase II transcription subunit 7 OS=Mus musculus GN=Med7 PE=2 SV=2) HSP 1 Score: 76.2554 bits (186), Expect = 1.390e-13 Identity = 37/99 (37.37%), Postives = 61/99 (61.62%), Query Frame = 3 Query: 39 DFKKELRSLNRELQLHILELSDVLVERPSQYAR--RVEDISLIFKNLHHLLNSLRPHQARATLIHILELQIQRRKQAVEDIKRRREEAQRRLKESLGTL 329 D KKELR LN + ++ L+L D+L+ P R ++ED+ L+F ++HHL+N RPHQAR TL ++E+Q ++R + E ++ E ++ L +L Sbjct: 73 DHKKELRKLNMSILINFLDLLDILIRSPGSIKREEKLEDLKLLFVHVHHLINEYRPHQARETLRVMMEVQKRQRLETAERFQKHLERVIEMIQNCLASL 171
BLAST of EY756239 vs. ExPASy Swiss-Prot
Match: MED7_HUMAN (Mediator of RNA polymerase II transcription subunit 7 OS=Homo sapiens GN=MED7 PE=1 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 1.390e-13 Identity = 37/99 (37.37%), Postives = 61/99 (61.62%), Query Frame = 3 Query: 39 DFKKELRSLNRELQLHILELSDVLVERPSQYAR--RVEDISLIFKNLHHLLNSLRPHQARATLIHILELQIQRRKQAVEDIKRRREEAQRRLKESLGTL 329 D KKELR LN + ++ L+L D+L+ P R ++ED+ L+F ++HHL+N RPHQAR TL ++E+Q ++R + E ++ E ++ L +L Sbjct: 73 DHKKELRKLNMSILINFLDLLDILIRSPGSIKREEKLEDLKLLFVHVHHLINEYRPHQARETLRVMMEVQKRQRLETAERFQKHLERVIEMIQNCLASL 171
BLAST of EY756239 vs. ExPASy Swiss-Prot
Match: MED7_BOVIN (Mediator of RNA polymerase II transcription subunit 7 OS=Bos taurus GN=MED7 PE=2 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 1.390e-13 Identity = 37/99 (37.37%), Postives = 61/99 (61.62%), Query Frame = 3 Query: 39 DFKKELRSLNRELQLHILELSDVLVERPSQYAR--RVEDISLIFKNLHHLLNSLRPHQARATLIHILELQIQRRKQAVEDIKRRREEAQRRLKESLGTL 329 D KKELR LN + ++ L+L D+L+ P R ++ED+ L+F ++HHL+N RPHQAR TL ++E+Q ++R + E ++ E ++ L +L Sbjct: 73 DHKKELRKLNMSILINFLDLLDILIRSPGSIKREEKLEDLKLLFVHVHHLINEYRPHQARETLRVMMEVQKRQRLETAERFQKHLERVIEMIQNCLASL 171
BLAST of EY756239 vs. ExPASy Swiss-Prot
Match: MED7_COCIM (Mediator of RNA polymerase II transcription subunit 7 OS=Coccidioides immitis GN=MED7 PE=3 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 1.816e-13 Identity = 36/96 (37.50%), Postives = 61/96 (63.54%), Query Frame = 3 Query: 27 GPNIDFKKELRSLNRELQLHILELSDVLVERPSQYARRVEDISLIFKNLHHLLNSLRPHQARATLIHILELQIQRRKQAVEDIKRRREEAQRRLKE 314 GP+ D L +++ L L+ LEL +L P QY ++EDI +F N HHLLN RPHQ+R +LI ++E Q+++ K+ + ++++ +E + L+E Sbjct: 111 GPSPDHAYYLLKISKSLLLNFLELVGILSINPEQYEPKIEDIRNLFINAHHLLNLYRPHQSRESLITMMEEQLEQAKEEIREMEQTKERVEIYLRE 206
BLAST of EY756239 vs. ExPASy Swiss-Prot
Match: MED7_CANGA (Mediator of RNA polymerase II transcription subunit 7 OS=Candida glabrata GN=MED7 PE=3 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 2.372e-13 Identity = 39/89 (43.82%), Postives = 57/89 (64.04%), Query Frame = 3 Query: 48 KELRSLNRELQLHILELSDVLVERPSQYARRVEDISLIFKNLHHLLNSLRPHQARATLIHILELQIQRRKQAVEDIKRRREEAQRRLKE 314 KELR L+ L L+ +EL VL P Y +VE+I I N+HHLLN RPHQ+R +LI +LE Q++ +KQ V +I+ ++ +LK+ Sbjct: 109 KELRRLSYSLLLNFVELVGVLSVNPELYESKVENIRTILVNIHHLLNEYRPHQSRESLIMLLEEQLEHKKQEVANIELVCQQVTEKLKQ 197
BLAST of EY756239 vs. ExPASy Swiss-Prot
Match: MED7_DANRE (Mediator of RNA polymerase II transcription subunit 7 OS=Danio rerio GN=med7 PE=2 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 6.901e-13 Identity = 35/99 (35.35%), Postives = 62/99 (62.63%), Query Frame = 3 Query: 39 DFKKELRSLNRELQLHILELSDVLVERPSQYAR--RVEDISLIFKNLHHLLNSLRPHQARATLIHILELQIQRRKQAVEDIKRRREEAQRRLKESLGTL 329 D K+EL+ LN + ++ L+L D+L++ P R ++ED+ L+F ++HHL+N RPHQAR TL ++E+Q ++R + E ++ E ++ L +L Sbjct: 73 DHKRELKKLNMSILVNFLDLLDILIKSPGSIKREEKLEDLKLLFVHMHHLINEYRPHQARETLRVMMEVQKRQRLETAERFQKHLERVVEMIQGCLSSL 171 The following BLAST results are available for this feature:
BLAST of EY756239 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 23
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Sequences
The
following sequences are available for this feature:
EST sequence >EY756239 ID=EY756239; Name=EY756239; organism=Citrus sinensis; type=EST; length=608bpback to top |