EY756229

Overview
NameEY756229
Unique NameEY756229
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length551
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig6307 contig Csv1_Contig6307:492..1042. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY756229 vs. ExPASy Swiss-Prot
Match: ADF3_ARATH (Actin-depolymerizing factor 3 OS=Arabidopsis thaliana GN=ADF3 PE=1 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 1.463e-13
Identity = 37/41 (90.24%), Postives = 39/41 (95.12%), Query Frame = 2
Query:    8 SEMIYASSKDRFKRELDGIQVELQATDPSEMGLDVFKDRAN 130
            S+MIYASSKDRFKRELDGIQVELQATDP+EM LDVFK RAN
Sbjct:   99 SKMIYASSKDRFKRELDGIQVELQATDPTEMDLDVFKSRAN 139          
BLAST of EY756229 vs. ExPASy Swiss-Prot
Match: ADF2_PETHY (Actin-depolymerizing factor 2 OS=Petunia hybrida GN=ADF2 PE=2 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 1.910e-13
Identity = 37/44 (84.09%), Postives = 41/44 (93.18%), Query Frame = 2
Query:    8 SEMIYASSKDRFKRELDGIQVELQATDPSEMGLDVFKDRAN*IK 139
            S+MIYASSKDRFKRELDGIQVELQATDP+EMGLDVF+ RA  I+
Sbjct:   99 SKMIYASSKDRFKRELDGIQVELQATDPTEMGLDVFRSRAGGIE 142          
BLAST of EY756229 vs. ExPASy Swiss-Prot
Match: ADF2_ARATH (Actin-depolymerizing factor 2 OS=Arabidopsis thaliana GN=ADF2 PE=2 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 1.910e-13
Identity = 36/40 (90.00%), Postives = 38/40 (95.00%), Query Frame = 2
Query:   11 EMIYASSKDRFKRELDGIQVELQATDPSEMGLDVFKDRAN 130
            +MIYASSKDRFKRELDGIQVELQATDP+EMGLDVFK R N
Sbjct:   98 KMIYASSKDRFKRELDGIQVELQATDPTEMGLDVFKSRTN 137          
BLAST of EY756229 vs. ExPASy Swiss-Prot
Match: ADF1_ARATH (Actin-depolymerizing factor 1 OS=Arabidopsis thaliana GN=ADF1 PE=1 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 3.259e-13
Identity = 36/41 (87.80%), Postives = 39/41 (95.12%), Query Frame = 2
Query:    8 SEMIYASSKDRFKRELDGIQVELQATDPSEMGLDVFKDRAN 130
            S+MIYASSKDRFKRELDGIQVELQATDP+EM LDVF+ RAN
Sbjct:   99 SKMIYASSKDRFKRELDGIQVELQATDPTEMDLDVFRSRAN 139          
BLAST of EY756229 vs. ExPASy Swiss-Prot
Match: ADF7_ORYSJ (Actin-depolymerizing factor 7 OS=Oryza sativa subsp. japonica GN=ADF7 PE=3 SV=2)

HSP 1 Score: 73.1738 bits (178), Expect = 9.482e-13
Identity = 35/41 (85.37%), Postives = 39/41 (95.12%), Query Frame = 2
Query:    8 SEMIYASSKDRFKRELDGIQVELQATDPSEMGLDVFKDRAN 130
            S+MIYASSKDRFKRELDGIQVELQATDP+E+GLDV + RAN
Sbjct:   99 SKMIYASSKDRFKRELDGIQVELQATDPTEVGLDVIRGRAN 139          
BLAST of EY756229 vs. ExPASy Swiss-Prot
Match: ADF1_PETHY (Actin-depolymerizing factor 1 OS=Petunia hybrida GN=ADF1 PE=2 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 1.617e-12
Identity = 35/41 (85.37%), Postives = 38/41 (92.68%), Query Frame = 2
Query:    8 SEMIYASSKDRFKRELDGIQVELQATDPSEMGLDVFKDRAN 130
            S+MIYASSKDRFKRELDGIQVELQA DP+EMGLDV + RAN
Sbjct:   99 SKMIYASSKDRFKRELDGIQVELQACDPTEMGLDVIQSRAN 139          
BLAST of EY756229 vs. ExPASy Swiss-Prot
Match: ADF4_ARATH (Actin-depolymerizing factor 4 OS=Arabidopsis thaliana GN=ADF4 PE=2 SV=2)

HSP 1 Score: 72.0182 bits (175), Expect = 2.112e-12
Identity = 35/41 (85.37%), Postives = 37/41 (90.24%), Query Frame = 2
Query:    8 SEMIYASSKDRFKRELDGIQVELQATDPSEMGLDVFKDRAN 130
            S+MIYASSKDRFKRELDGIQVELQATDP+EM LDV K R N
Sbjct:   99 SKMIYASSKDRFKRELDGIQVELQATDPTEMDLDVLKSRVN 139          
BLAST of EY756229 vs. ExPASy Swiss-Prot
Match: ADF10_ARATH (Actin-depolymerizing factor 10 OS=Arabidopsis thaliana GN=ADF10 PE=2 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 2.112e-12
Identity = 34/41 (82.93%), Postives = 37/41 (90.24%), Query Frame = 2
Query:    8 SEMIYASSKDRFKRELDGIQVELQATDPSEMGLDVFKDRAN 130
            S+M+YASSKDRFKRELDGIQVELQATDPSEM LD+ K R N
Sbjct:   99 SKMLYASSKDRFKRELDGIQVELQATDPSEMSLDIIKGRVN 139          
BLAST of EY756229 vs. ExPASy Swiss-Prot
Match: ADF1_ORYSJ (Actin-depolymerizing factor 1 OS=Oryza sativa subsp. japonica GN=ADF1 PE=2 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 6.146e-12
Identity = 33/40 (82.50%), Postives = 37/40 (92.50%), Query Frame = 2
Query:    8 SEMIYASSKDRFKRELDGIQVELQATDPSEMGLDVFKDRA 127
            S+M+YASSKDRFKRELDGIQVELQATDPSEM +D+ K RA
Sbjct:   99 SKMLYASSKDRFKRELDGIQVELQATDPSEMSMDIVKSRA 138          
BLAST of EY756229 vs. ExPASy Swiss-Prot
Match: ADF12_ARATH (Actin-depolymerizing factor 12 OS=Arabidopsis thaliana GN=ADF12 PE=2 SV=2)

HSP 1 Score: 70.4774 bits (171), Expect = 6.146e-12
Identity = 33/39 (84.62%), Postives = 36/39 (92.31%), Query Frame = 2
Query:   11 EMIYASSKDRFKRELDGIQVELQATDPSEMGLDVFKDRA 127
            +M+YASSKDRFKRELDGIQVELQATDPSEM LD+ K RA
Sbjct:   98 KMVYASSKDRFKRELDGIQVELQATDPSEMSLDIIKSRA 136          
The following BLAST results are available for this feature:
BLAST of EY756229 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 17
Match NameE-valueIdentityDescription
ADF3_ARATH1.463e-1390.24Actin-depolymerizing factor 3 OS=Arabidopsis thali... [more]
ADF2_PETHY1.910e-1384.09Actin-depolymerizing factor 2 OS=Petunia hybrida G... [more]
ADF2_ARATH1.910e-1390.00Actin-depolymerizing factor 2 OS=Arabidopsis thali... [more]
ADF1_ARATH3.259e-1387.80Actin-depolymerizing factor 1 OS=Arabidopsis thali... [more]
ADF7_ORYSJ9.482e-1385.37Actin-depolymerizing factor 7 OS=Oryza sativa subs... [more]
ADF1_PETHY1.617e-1285.37Actin-depolymerizing factor 1 OS=Petunia hybrida G... [more]
ADF4_ARATH2.112e-1285.37Actin-depolymerizing factor 4 OS=Arabidopsis thali... [more]
ADF10_ARATH2.112e-1282.93Actin-depolymerizing factor 10 OS=Arabidopsis thal... [more]
ADF1_ORYSJ6.146e-1282.50Actin-depolymerizing factor 1 OS=Oryza sativa subs... [more]
ADF12_ARATH6.146e-1284.62Actin-depolymerizing factor 12 OS=Arabidopsis thal... [more]

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Properties
Property NameValue
Genbank descriptionCS13-C1-001-006-B03-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY756229 ID=EY756229; Name=EY756229; organism=Citrus sinensis; type=EST; length=551bp
CCACGCGTCCGAGATGATTTATGCAAGCTCCAAGGACAGGTTCAAGAGAG
AGCTAGATGGCATTCAAGTGGAGCTGCAGGCAACTGATCCATCTGAGATG
GGTCTTGACGTATTTAAAGACCGTGCCAACTAAATAAAGGCTCCTGATCT
CAGCAATTGAGATTGTTTTTATCTTTTGTGCTTTACCTAAAGGTGAAATG
TTAATAGTTTGTGGCGGCAGCTTGAATCTAACTGAATTATGATATTGGTT
TGTTGTTCAAGTTTCACCGATGCAGTATTCTCGTCTAGAACCATTTCAGT
GGTCTTTATGATGTCTTTATTGATTTGTTGTGGTGTGGAAGTTATGGGAT
GAGTGGCTACTTATAGCTATTTCGTCAAGCTAAGGTGTTTCAATTGATGG
GGGATGGATAACCCTCTGTTAGGGTTGTTTTTACTTTGAAAATGGATGTT
TCATTTTGAACTTTATAAATGGATGTTTCATTTTTCTTGTTACTTATGCA
TAATTGGCAAGTGAAGAAATACCGTTCATTTTAAAAAAAAAAAAAAAAAA
A
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