EY756226

Overview
NameEY756226
Unique NameEY756226
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length903
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig11391 contig Csv1_Contig11391:709..1609. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY756226 vs. ExPASy Swiss-Prot
Match: SFGH_ARATH (S-formylglutathione hydrolase OS=Arabidopsis thaliana GN=SFGH PE=1 SV=2)

HSP 1 Score: 97.4413 bits (241), Expect = 1.046e-19
Identity = 43/62 (69.35%), Postives = 52/62 (83.87%), Query Frame = 2
Query:   11 AKNKNVSATILIDQGQDDKFLPDQLFPNKFEEACRSANVALLLRFQPGYDHSYFFIATFIDD 196
            +K  N+SATILIDQG++D+F PDQL P+KFEEAC+  N  LLLR  PGYDHSY+FIATFI+D
Sbjct:  212 SKYNNLSATILIDQGENDQFYPDQLLPSKFEEACKKVNAPLLLRLHPGYDHSYYFIATFIED 273          

HSP 2 Score: 20.7866 bits (42), Expect = 1.046e-19
Identity = 8/13 (61.54%), Postives = 9/13 (69.23%), Query Frame = 3
Query:  264 DGHIRHHAQAPRL 302
            + HI HHAQA  L
Sbjct:  272 EDHISHHAQALEL 284          
The following BLAST results are available for this feature:
BLAST of EY756226 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
SFGH_ARATH1.046e-1969.35S-formylglutathione hydrolase OS=Arabidopsis thali... [more]
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Properties
Property NameValue
Genbank descriptionCS13-C1-001-006-A12-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY756226 ID=EY756226; Name=EY756226; organism=Citrus sinensis; type=EST; length=903bp
CCACGCGTCCGCAAAGAACAAGAATGTATCTGCCACCATCTTGATTGATC
AGGGTCAGGATGACAAATTCTTGCCTGATCAGCTGTTCCCAAACAAGTTT
GAGGAGGCATGCCGGAGTGCCAATGTTGCACTCTTGTTGCGATTTCAGCC
TGGTTATGATCACTCCTACTTTTTCATTGCTACTTTCATTGATGATCACA
TCCACCATCATGCTCAAGCTCTTAGGCTTTAACTGCTTGAGATTTCCTGG
TTCAGAAATCTGTGATGGTCACATCCGCCACCATGCTCAAGCTCCCAGGC
TGTAACTTTTTAGATTTTGTGTTTGGAGAATCTGGAGCCATGTAAATCAT
TTAGACCAACTTTGAACTGTTTACTTGTATTGTCGGTCTGGTGTGTGTAT
GCTTTTGAACTACTGACAGAATTTGCAGTAATAAACTAAATGGTGGTTGA
AAAATATATATNNNAANANNNAAAAAAAANAAAGAAAAATAAAAAAAAAA
AACAAANAAAAAAAACAAAAAAANAAAANCCNCCAAANAANAANNNNCCC
CTCCTTAAAAANCATCANNAACCCTTTATNNNTNGGGGGGGCCCGTTTAA
AAAATCCAATTTTTAAGCGCGGTGGGTGGGGAATATTATTTCTCTTTTTG
GGGGGCCCACAATTTCTTTTCCGGCGCGGTGTTTTTAAACCTCGGGAGGG
GGAAAAACCCCGGGGTTCCCCACAATTAAAACCTTGGAGAAAAACCCCCT
TTTTCCCGAGTGGGGAAAAAAAAAAAAAGGCGCCCCCGATTTCCCTTTTC
AAAAATTTGGCAACCTTAAAGGGAAAGGGGACCCCCCTTTAACGCCCTTT
AAAAGCGCGGGGGGGGGGGGTGTCCCCCACGGAACCCTTACTTTTCCGGC
TCC
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