EY756211

Overview
NameEY756211
Unique NameEY756211
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length877
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig9350 contig Csv1_Contig9350:302..1178. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY756211 vs. ExPASy Swiss-Prot
Match: RL5_CUCSA (60S ribosomal protein L5 OS=Cucumis sativus GN=RPL5 PE=2 SV=1)

HSP 1 Score: 348.591 bits (893), Expect = 2.733e-95
Identity = 172/210 (81.90%), Postives = 186/210 (88.57%), Query Frame = 3
Query:   12 GLVVGLTNYAAAYCTGLLLARRVLKMLEMDDEYEGNVEATGEDYSVEPADTRRPFRALLDVGLIKTTTGNRVFXXXXXXXXXXXXIPHSDKRFAGFSKDGKQLDAEVHRKYIYGGHVAAYMSTLMEDEPEKYQSHFTEYIKKGIDADGLEALYKKVHAAIRADPTMKKSEKPAPKEHKRYNLKKLTYEERKAKLVERLNALNSAVDEEDE 641
            GL VGLTNYAAAYCTGLLLARRVLKMLEMD EYEGNVEATGEDYSVEPADTRRPFRALLDVGLI+TTTGNRVF            IPHSDKRFAG++K+G+QLD EVHRKYI+GGHVAAYM TLMEDEPEKYQSHF+EYIKKGI+AD LE LYKKVHAAIRA+P  KKS+KP PK HKRYNLKKLTY+ERKA+LVERLNALNSA D +D+
Sbjct:   87 GLEVGLTNYAAAYCTGLLLARRVLKMLEMDAEYEGNVEATGEDYSVEPADTRRPFRALLDVGLIRTTTGNRVFGALKGALDGGLDIPHSDKRFAGYAKNGQQLDVEVHRKYIFGGHVAAYMRTLMEDEPEKYQSHFSEYIKKGIEADELEGLYKKVHAAIRANPIAKKSDKPQPKAHKRYNLKKLTYDERKARLVERLNALNSAADGDDD 296          
BLAST of EY756211 vs. ExPASy Swiss-Prot
Match: RL51_ORYSJ (60S ribosomal protein L5-1 OS=Oryza sativa subsp. japonica GN=RPL5A PE=2 SV=1)

HSP 1 Score: 326.25 bits (835), Expect = 1.453e-88
Identity = 159/212 (75.00%), Postives = 178/212 (83.96%), Query Frame = 3
Query:    6 RPGLVVGLTNYAAAYCTGLLLARRVLKMLEMDDEYEGNVEATGEDYSVEPADTRRPFRALLDVGLIKTTTGNRVFXXXXXXXXXXXXIPHSDKRFAGFSKDGKQLDAEVHRKYIYGGHVAAYMSTLMEDEPEKYQSHFTEYIKKGIDADGLEALYKKVHAAIRADPTMKKSEKPAPKEHKRYNLKKLTYEERKAKLVERLNALNSAVDEEDE 641
            R GL VGLTNYAAAYCTGLLLARRVLK+  +D EYEGN+EATGEDY VEPAD RRPFRALLDVGLI+TTTGNRVF            IPHSDKRFAGF KD KQLD+++HRKYIYGGHVA YM ++ E+EPEK+Q+HF+EY+KKGIDADG+EALYKKVHAAIRADPTM KS K  P  HKRYNLKKLTYE+RKA LVERLNALNS+   +D+
Sbjct:   86 RYGLEVGLTNYAAAYCTGLLLARRVLKLRGLDQEYEGNIEATGEDYYVEPADERRPFRALLDVGLIRTTTGNRVFGALKGALDGGLDIPHSDKRFAGFKKDEKQLDSDIHRKYIYGGHVADYMRSMAEEEPEKFQAHFSEYLKKGIDADGMEALYKKVHAAIRADPTMAKSTKKEPATHKRYNLKKLTYEQRKASLVERLNALNSSAGADDD 297          
BLAST of EY756211 vs. ExPASy Swiss-Prot
Match: RL51_ORYSI (60S ribosomal protein L5-1 OS=Oryza sativa subsp. indica GN=RPL5A PE=2 SV=2)

HSP 1 Score: 326.25 bits (835), Expect = 1.453e-88
Identity = 159/212 (75.00%), Postives = 178/212 (83.96%), Query Frame = 3
Query:    6 RPGLVVGLTNYAAAYCTGLLLARRVLKMLEMDDEYEGNVEATGEDYSVEPADTRRPFRALLDVGLIKTTTGNRVFXXXXXXXXXXXXIPHSDKRFAGFSKDGKQLDAEVHRKYIYGGHVAAYMSTLMEDEPEKYQSHFTEYIKKGIDADGLEALYKKVHAAIRADPTMKKSEKPAPKEHKRYNLKKLTYEERKAKLVERLNALNSAVDEEDE 641
            R GL VGLTNYAAAYCTGLLLARRVLK+  +D EYEGN+EATGEDY VEPAD RRPFRALLDVGLI+TTTGNRVF            IPHSDKRFAGF KD KQLD+++HRKYIYGGHVA YM ++ E+EPEK+Q+HF+EY+KKGIDADG+EALYKKVHAAIRADPTM KS K  P  HKRYNLKKLTYE+RKA LVERLNALNS+   +D+
Sbjct:   86 RYGLEVGLTNYAAAYCTGLLLARRVLKLRGLDQEYEGNIEATGEDYYVEPADERRPFRALLDVGLIRTTTGNRVFGALKGALDGGLDIPHSDKRFAGFKKDEKQLDSDIHRKYIYGGHVADYMRSMAEEEPEKFQAHFSEYLKKGIDADGMEALYKKVHAAIRADPTMAKSTKKEPATHKRYNLKKLTYEQRKASLVERLNALNSSAGADDD 297          
BLAST of EY756211 vs. ExPASy Swiss-Prot
Match: RL51_ARATH (60S ribosomal protein L5-1 OS=Arabidopsis thaliana GN=ATL5 PE=2 SV=2)

HSP 1 Score: 325.865 bits (834), Expect = 1.897e-88
Identity = 158/210 (75.24%), Postives = 177/210 (84.29%), Query Frame = 3
Query:   12 GLVVGLTNYAAAYCTGLLLARRVLKMLEMDDEYEGNVEATGEDYSVEPADTRRPFRALLDVGLIKTTTGNRVFXXXXXXXXXXXXIPHSDKRFAGFSKDGKQLDAEVHRKYIYGGHVAAYMSTLMEDEPEKYQSHFTEYIKKGIDADGLEALYKKVHAAIRADPTMKKSEKPAPKEHKRYNLKKLTYEERKAKLVERLNALNSAVDEEDE 641
            GL VGLTNYAAAYCTGLLLARRVLKMLEMDDEYEGNVEATGED+SVEP D+RRPFRALLDVGLI+TTTGNRVF            IPHSDKRFAGF K+ KQLDAE+HR YIYGGHV+ YM  L EDEPEK Q+HF+ YIKKG++A+ +E LYKKVHAAIRADP  KK+ KPAPK+HKRYNLKKLTYEERK KL+ER+ ALN A  ++D+
Sbjct:   87 GLTVGLTNYAAAYCTGLLLARRVLKMLEMDDEYEGNVEATGEDFSVEPTDSRRPFRALLDVGLIRTTTGNRVFGALKGALDGGLDIPHSDKRFAGFHKENKQLDAEIHRNYIYGGHVSNYMKLLGEDEPEKLQTHFSAYIKKGVEAESIEELYKKVHAAIRADPNPKKTVKPAPKQHKRYNLKKLTYEERKNKLIERVKALNGAGGDDDD 296          
BLAST of EY756211 vs. ExPASy Swiss-Prot
Match: RL52_ARATH (60S ribosomal protein L5-2 OS=Arabidopsis thaliana GN=RPL5B PE=2 SV=3)

HSP 1 Score: 324.324 bits (830), Expect = 5.520e-88
Identity = 157/210 (74.76%), Postives = 177/210 (84.29%), Query Frame = 3
Query:   12 GLVVGLTNYAAAYCTGLLLARRVLKMLEMDDEYEGNVEATGEDYSVEPADTRRPFRALLDVGLIKTTTGNRVFXXXXXXXXXXXXIPHSDKRFAGFSKDGKQLDAEVHRKYIYGGHVAAYMSTLMEDEPEKYQSHFTEYIKKGIDADGLEALYKKVHAAIRADPTMKKSEKPAPKEHKRYNLKKLTYEERKAKLVERLNALNSAVDEEDE 641
            GL VGLTNYAAAYCTGLLLARRVLKMLEMDDEYEGNVEATGED+SVEP D+RRPFRALLDVGLI+TTTGNRVF            IPHSDKRFAGF K+ KQLDAE+HR YIYGGHV+ YM  L EDEPEK Q+HF+ YIKKG++A+ +E +YKKVHAAIRA+P  KK+EK APKEHKRYNLKKLTYEERK KL+ER+ ALN A  ++D+
Sbjct:   87 GLTVGLTNYAAAYCTGLLLARRVLKMLEMDDEYEGNVEATGEDFSVEPTDSRRPFRALLDVGLIRTTTGNRVFGALKGALDGGLDIPHSDKRFAGFHKENKQLDAEIHRNYIYGGHVSNYMKLLGEDEPEKLQTHFSAYIKKGVEAESIEEMYKKVHAAIRAEPNHKKTEKSAPKEHKRYNLKKLTYEERKNKLIERVKALNGAGGDDDD 296          
BLAST of EY756211 vs. ExPASy Swiss-Prot
Match: RL52_ORYSJ (60S ribosomal protein L5-2 OS=Oryza sativa subsp. japonica GN=RPL5B PE=3 SV=1)

HSP 1 Score: 323.168 bits (827), Expect = 1.230e-87
Identity = 158/212 (74.53%), Postives = 177/212 (83.49%), Query Frame = 3
Query:    6 RPGLVVGLTNYAAAYCTGLLLARRVLKMLEMDDEYEGNVEATGEDYSVEPADTRRPFRALLDVGLIKTTTGNRVFXXXXXXXXXXXXIPHSDKRFAGFSKDGKQLDAEVHRKYIYGGHVAAYMSTLMEDEPEKYQSHFTEYIKKGIDADGLEALYKKVHAAIRADPTMKKSEKPAPKEHKRYNLKKLTYEERKAKLVERLNALNSAVDEEDE 641
            R GL VGLTNYAAAYCTGLLLARRVL +  +D EYEGNVEATGEDY VEPAD RRPFRALLDVGLI+TTTGNRVF            IPHSDKRFAGF KD KQLD+++HRKYIYGGHVA YM ++ E+EPEK+Q+HF+EY+KKGIDADG+E+LYKKVHAAIRADPTM KS K  P  HKRYNLKKLTYE+RKA LVERLNALNS+   +D+
Sbjct:   86 RYGLEVGLTNYAAAYCTGLLLARRVLTLRGLDQEYEGNVEATGEDYYVEPADERRPFRALLDVGLIRTTTGNRVFGALKGALDGGLDIPHSDKRFAGFKKDEKQLDSDIHRKYIYGGHVADYMRSMAEEEPEKFQAHFSEYLKKGIDADGMESLYKKVHAAIRADPTMAKSTKKEPATHKRYNLKKLTYEQRKASLVERLNALNSSAGADDD 297          
BLAST of EY756211 vs. ExPASy Swiss-Prot
Match: RL5_CAEEL (60S ribosomal protein L5 OS=Caenorhabditis elegans GN=rpl-5 PE=2 SV=1)

HSP 1 Score: 198.364 bits (503), Expect = 4.569e-50
Identity = 102/214 (47.66%), Postives = 145/214 (67.76%), Query Frame = 3
Query:    6 RPGLVVGLTNYAAAYCTGLLLARRVLKMLEMDDEYEGNVEATGEDYSVEPADTRRPFRALLDVGLIKTTTGNRVFXXXXXXXXXXXXIPHSDKRFAGFSKDGKQLDAEVHRKYIYGGHVAAYMSTLMEDEPEKYQSHFTEYIKKGIDADGLEALYKKVHAAIRAD--PTMKKSEKPAPKEHKRYNLKKLTYEERKAKLVERLNALNSAVDEEDE 641
            R GL VGLTNYAAAY TGLLLARR LK + +D  Y+G+ E TGEDY+VE    R PF+A+LD+GL +TTTG+++F            +PHS+ RF GF ++ K+ +AE HR  I G HVA YM+ L E++ ++Y+  F++++  G++AD L A Y+KVH+AIRAD  P  KK+ KP+    KR+  K+LTY+ERK ++ ++  AL   + E+ E
Sbjct:   85 RYGLKVGLTNYAAAYATGLLLARRHLKTIGLDSTYKGHEELTGEDYNVEEEGDRAPFKAVLDIGLARTTTGSKIFAVMKGVADGGINVPHSESRFFGFDQESKEYNAEAHRDRILGKHVADYMTYLKEEDEDRYKRQFSKFLAAGLNADNLVATYQKVHSAIRADASPAAKKAAKPS----KRHTAKRLTYDERKQRVADK-KALLLQLKEQQE 293          
BLAST of EY756211 vs. ExPASy Swiss-Prot
Match: RL5_CAEBR (60S ribosomal protein L5 OS=Caenorhabditis briggsae GN=rpl-5 PE=3 SV=2)

HSP 1 Score: 198.364 bits (503), Expect = 4.569e-50
Identity = 99/212 (46.70%), Postives = 139/212 (65.57%), Query Frame = 3
Query:    6 RPGLVVGLTNYAAAYCTGLLLARRVLKMLEMDDEYEGNVEATGEDYSVEPADTRRPFRALLDVGLIKTTTGNRVFXXXXXXXXXXXXIPHSDKRFAGFSKDGKQLDAEVHRKYIYGGHVAAYMSTLMEDEPEKYQSHFTEYIKKGIDADGLEALYKKVHAAIRADPTMKKSEKPAPKEHKRYNLKKLTYEERKAKLVERLNALNSAVDEEDE 641
            R GL  GLTNYAAAY TGLLLARR LK + +D  Y+G+ E TGEDY+VE    R PF+A+LD+GL +TTTG+++F            +PHS+ RF GF ++ K  +AE HR  I G HVA YMS L E++ ++Y+  F++++  G++AD L A Y+K HA IRADP+   S K A K  KR+  K+LTY+ERK ++ ++   L    +++ E
Sbjct:   85 RYGLKAGLTNYAAAYATGLLLARRHLKAIGLDSTYKGHEELTGEDYNVEEEGDRAPFKAVLDIGLARTTTGSKIFAVMKGVADGGINVPHSESRFFGFDQESKDYNAEAHRDRILGKHVADYMSLLKEEDEDRYKRQFSKFLSNGMNADNLVATYQKAHANIRADPS--PSAKKAAKPSKRHTAKRLTYDERKQRVADKKALLLQLKEQQQE 294          
BLAST of EY756211 vs. ExPASy Swiss-Prot
Match: RL5_NEUCR (60S ribosomal protein L5 OS=Neurospora crassa GN=rpl-5 PE=3 SV=1)

HSP 1 Score: 197.978 bits (502), Expect = 5.967e-50
Identity = 109/215 (50.70%), Postives = 140/215 (65.12%), Query Frame = 3
Query:   12 GLVVGLTNYAAAYCTGLLLARRVLKMLEMDDEYEGNVEATGEDYSVEPADT----RRPFRALLDVGLIKTTTGNRVFXXXXXXXXXXXXIPHSDKRFAGFSKDGKQLDAEVHRKYIYGGHVAAYMSTLMEDEPEKYQSHFTEYIKKGIDADGLEALYKKVHAAIRADPTMKKSEKPAPKEHK--------RYNLKKLTYEERKAKLVERLNALNS 620
            G+  GLTN+AAAY TGLLLARRVLK L +D+ ++G  EA GE    E A+T    RRPF+A LDVGL +T+TG RVF            IPHS+ RF G+  + ++LDAE  +KYI+GGHVA YM TL +D+ E+Y+S F  YI+  ++ADGLE LY + HAAIR DP  KK+E  APK+ K        +Y   KLT E+R A + ER+ AL S
Sbjct:   87 GIEHGLTNWAAAYATGLLLARRVLKKLGLDETFKGVEEADGEYKLTEAAETDDGERRPFKAFLDVGLARTSTGARVFGAMKGASDGGIFIPHSENRFPGYDMESEELDAETLKKYIFGGHVAEYMETLADDDEERYKSQFNRYIEDDLEADGLEDLYAEAHAAIREDP-FKKAESEAPKKTKEEWKAESLKYKKSKLTREQRAAGVQERIAALRS 300          
BLAST of EY756211 vs. ExPASy Swiss-Prot
Match: RL5_LYSTE (60S ribosomal protein L5 OS=Lysiphlebus testaceipes GN=RpL5 PE=2 SV=1)

HSP 1 Score: 197.593 bits (501), Expect = 7.793e-50
Identity = 100/210 (47.62%), Postives = 133/210 (63.33%), Query Frame = 3
Query:   12 GLVVGLTNYAAAYCTGLLLARRVLKMLEMDDEYEGNVEATGEDYSVEPADTRR-PFRALLDVGLIKTTTGNRVFXXXXXXXXXXXXIPHSDKRFAGFSKDGKQLDAEVHRKYIYGGHVAAYMSTLMEDEPEKYQSHFTEYIKKGIDADGLEALYKKVHAAIRADPTMKKSEKPAPKEHKRYNLKKLTYEERKAKLVERLNALNSAVDEED 638
            G+ VGLTNYAAAYCTGLLLARR+LK L++D  Y G  E  G++Y+VE  D     FR  LD GL++TTTG R+F            IPHS KRF G+  + K  +A+VHR++I+  H+A YM TL E+EPE +Q  F++YIK GI ADG+E +YKK H AIRADP   +  K      KR+N  KLT  ERK ++ +   +    ++E +
Sbjct:   87 GIKVGLTNYAAAYCTGLLLARRLLKQLKLDTLYTGTTEVDGDEYNVEEHDDGPGAFRCYLDTGLMRTTTGARIFGAMKGAVDGGLNIPHSTKRFPGYDNESKSFNADVHRQHIFAHHIANYMKTLEENEPENFQRQFSQYIKNGITADGIEEMYKKAHEAIRADPDRAEIVKTKEPVKKRWNRAKLTLSERKDRVKQIKASFQKKLEETE 296          
The following BLAST results are available for this feature:
BLAST of EY756211 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 36
Match NameE-valueIdentityDescription
RL5_CUCSA2.733e-9581.9060S ribosomal protein L5 OS=Cucumis sativus GN=RPL... [more]
RL51_ORYSJ1.453e-8875.0060S ribosomal protein L5-1 OS=Oryza sativa subsp. ... [more]
RL51_ORYSI1.453e-8875.0060S ribosomal protein L5-1 OS=Oryza sativa subsp. ... [more]
RL51_ARATH1.897e-8875.2460S ribosomal protein L5-1 OS=Arabidopsis thaliana... [more]
RL52_ARATH5.520e-8874.7660S ribosomal protein L5-2 OS=Arabidopsis thaliana... [more]
RL52_ORYSJ1.230e-8774.5360S ribosomal protein L5-2 OS=Oryza sativa subsp. ... [more]
RL5_CAEEL4.569e-5047.6660S ribosomal protein L5 OS=Caenorhabditis elegans... [more]
RL5_CAEBR4.569e-5046.7060S ribosomal protein L5 OS=Caenorhabditis briggsa... [more]
RL5_NEUCR5.967e-5050.7060S ribosomal protein L5 OS=Neurospora crassa GN=r... [more]
RL5_LYSTE7.793e-5047.6260S ribosomal protein L5 OS=Lysiphlebus testaceipe... [more]

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Properties
Property NameValue
Genbank descriptionCS13-C1-001-005-H09-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY756211 ID=EY756211; Name=EY756211; organism=Citrus sinensis; type=EST; length=877bp
CCACGCGTCCGGGACTTGTTGTCGGTCTTACAAACTATGCTGCAGCTTAT
TGCACTGGGCTTCTTTTGGCTCGTCGTGTCTTGAAGATGCTTGAAATGGA
TGATGAGTATGAGGGCAATGTTGAGGCTACCGGAGAGGATTACTCTGTCG
AACCAGCTGATACAAGGAGGCCATTCCGTGCTCTCCTTGATGTTGGGCTC
ATCAAAACAACAACTGGAAACCGTGTCTTTGGTGCTCTGAAGGGAGCATT
AGATGGTGGATTGGACATTCCTCATAGTGACAAGAGGTTTGCTGGTTTTT
CGAAGGATGGCAAGCAGCTGGATGCTGAGGTTCACCGCAAGTATATCTAT
GGTGGACATGTTGCTGCTTACATGAGTACATTGATGGAGGATGAGCCAGA
GAAGTATCAATCTCACTTCACCGAGTACATCAAGAAAGGAATTGATGCTG
ATGGCTTGGAGGCACTGTACAAGAAGGTTCATGCTGCCATTCGTGCAGAT
CCTACAATGAAGAAATCTGAGAAGCCAGCTCCCAAAGAACATAAGAGGTA
TAATTTGAAGAAGCTTACTTACGAGGAAAGGAAGGCGAAGCTGGTTGAAA
GGCTGAATGCCCTTAACTCGGCAGTTGATGAGGAGGACGAATGAAAGCAT
CATAACTAGATATGAATTCAAAATATGTGGCAAATCTGCAGTACACATTT
GTTGTTGCAGTTGCTAGAACCTAAAAATGTTTCTTTGCCCAGTTTTTATT
TTTATTTTTATTTTTAATCATCTTCTGTTTTGGCAATTTTGCAGCTTGGA
TTTCTCATTAGATAAACAGGNTTTGAGATTTTTAGCTTTTGGTGAAATGC
AATTTCATTTTGACTTAAAAAAAAAAA
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