EY756209

Overview
NameEY756209
Unique NameEY756209
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length453
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig13461 contig Csv1_Contig13461:111..563. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
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BLAST of EY756209 vs. ExPASy Swiss-Prot
Match: POP3_ARATH (Probable protein Pop3 OS=Arabidopsis thaliana GN=At3g17210 PE=1 SV=1)

HSP 1 Score: 135.961 bits (341), Expect = 7.464e-32
Identity = 62/77 (80.52%), Postives = 71/77 (92.21%), Query Frame = 1 
Query:   13 KDYANLVNLIEPMKSFQWGKNVSIENLHQGFTHIFESTFESTEGVAEYVAHPAHVEYANLFLANLEKVLVIDYKPTT 243
            K YANLVNLIEPMK+F WGK+VSIENLHQG+THIFESTFES E VAEY+AHPAHVE+A +FL +L+KVLVIDYKPT+
Sbjct:   30 KGYANLVNLIEPMKAFHWGKDVSIENLHQGYTHIFESTFESKEAVAEYIAHPAHVEFATIFLGSLDKVLVIDYKPTS 106
[Close]
BLAST of EY756209 vs. ExPASy Swiss-Prot
Match: Y5258_ARATH (Uncharacterized protein At5g22580 OS=Arabidopsis thaliana GN=At5g22580 PE=1 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 2.949e-12
Identity = 31/76 (40.79%), Postives = 52/76 (68.42%), Query Frame = 1 
Query:    7 VRKDYANLVNLIEPMKSFQWGKNV-SIENLHQGFTHIFESTFESTEGVAEYVAHPAHVEYANLFLANLEKVLVIDY 231
            + K   NLV+ I+ +KSF+WG++  S + L QGFTH F  TFE+ +G   + +HP HVE++  F A ++K++++D+
Sbjct:   23 ILKGLENLVSQIDTVKSFEWGEDKESHDMLRQGFTHAFSMTFENKDGYVAFTSHPLHVEFSAAFTAVIDKIVLLDF 98
The following BLAST results are available for this feature:
BLAST of EY756209 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
POP3_ARATH7.464e-3280.52Probable protein Pop3 OS=Arabidopsis thaliana GN=A... [more]
Y5258_ARATH2.949e-1240.79Uncharacterized protein At5g22580 OS=Arabidopsis t... [more]
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Properties
Property NameValue
Genbank descriptionCS13-C1-001-005-H07-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY756209 ID=EY756209; Name=EY756209; organism=Citrus sinensis; type=EST; length=453bp
CCACGCGTCCGCAAAGACTATGCAAATCTTGTGAATCTCATTGAACCCAT
GAAGTCTTTCCAATGGGGCAAGAATGTGAGCATTGAGAATCTTCATCAGG
GTTTCACTCATATTTTTGAATCTACCTTTGAGAGCACAGAGGGTGTTGCA
GAGTATGTAGCTCATCCAGCACATGTTGAATACGCAAACTTGTTCCTGGC
CAACTTGGAGAAAGTTCTCGTGATTGACTACAAACCGACAACTGTACGTG
TCTGAGTTGTACTAGTAGGGAAGTGATCAGTCTTCCATGTGGTTGTTATT
TGAATATTGTGTCCGTTTTCTTGAACAATATTGGGTGACTTCATTTGTAT
GTGAAATTGATGGTGGTGAAACCCAAGAGTTTATGTATTTGGATATAATG
ATATGACAATAAGGGTAGTTTGAATAAAANAAAAAAAAAAAAAAAAAAAA
AAA
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