EY756205

Overview
NameEY756205
Unique NameEY756205
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length503
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig7866 contig Csv1_Contig7866:253..755. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of EY756205 vs. ExPASy Swiss-Prot
Match: RS141_MAIZE (40S ribosomal protein S14 OS=Zea mays PE=3 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 4.519e-21
Identity = 53/67 (79.10%), Postives = 55/67 (82.09%), Query Frame = 3 
Query:   12 AAMLAAQDVSQRCKELGITALHIKLRAXXXXXXXXXXXXAQSALRALARSGMKIGRIEDVTPIPTDS 212
            AAMLAAQDV+QRCKELGITALHIKLRA            AQSALRALARSGMKIGRIEDVTP+PTDS
Sbjct:   71 AAMLAAQDVAQRCKELGITALHIKLRATGGNKTKTPGPGAQSALRALARSGMKIGRIEDVTPVPTDS 137
[Close]
BLAST of EY756205 vs. ExPASy Swiss-Prot
Match: RS143_ARATH (40S ribosomal protein S14-3 OS=Arabidopsis thaliana GN=RPS14C PE=2 SV=2)

HSP 1 Score: 99.7525 bits (247), Expect = 7.709e-21
Identity = 52/67 (77.61%), Postives = 55/67 (82.09%), Query Frame = 3 
Query:   12 AAMLAAQDVSQRCKELGITALHIKLRAXXXXXXXXXXXXAQSALRALARSGMKIGRIEDVTPIPTDS 212
            AAMLAAQDV+QRCKELGITA+H+KLRA            AQSALRALARSGMKIGRIEDVTPIPTDS
Sbjct:   72 AAMLAAQDVAQRCKELGITAIHVKLRATGGNKTKTPGPGAQSALRALARSGMKIGRIEDVTPIPTDS 138
[Close]
BLAST of EY756205 vs. ExPASy Swiss-Prot
Match: RS142_ARATH (40S ribosomal protein S14-2 OS=Arabidopsis thaliana GN=RPS14B PE=1 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 7.709e-21
Identity = 52/67 (77.61%), Postives = 55/67 (82.09%), Query Frame = 3 
Query:   12 AAMLAAQDVSQRCKELGITALHIKLRAXXXXXXXXXXXXAQSALRALARSGMKIGRIEDVTPIPTDS 212
            AAMLAAQDV+QRCKELGITA+H+KLRA            AQSALRALARSGMKIGRIEDVTPIPTDS
Sbjct:   72 AAMLAAQDVAQRCKELGITAMHVKLRATGGNKTKTPGPGAQSALRALARSGMKIGRIEDVTPIPTDS 138
[Close]
BLAST of EY756205 vs. ExPASy Swiss-Prot
Match: RS141_ARATH (40S ribosomal protein S14-1 OS=Arabidopsis thaliana GN=RPS14A PE=2 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 7.709e-21
Identity = 52/67 (77.61%), Postives = 55/67 (82.09%), Query Frame = 3 
Query:   12 AAMLAAQDVSQRCKELGITALHIKLRAXXXXXXXXXXXXAQSALRALARSGMKIGRIEDVTPIPTDS 212
            AAMLAAQDV+QRCKELGITA+H+KLRA            AQSALRALARSGMKIGRIEDVTPIPTDS
Sbjct:   72 AAMLAAQDVAQRCKELGITAMHVKLRATGGNKTKTPGPGAQSALRALARSGMKIGRIEDVTPIPTDS 138
[Close]
BLAST of EY756205 vs. ExPASy Swiss-Prot
Match: RS14_RAT (40S ribosomal protein S14 OS=Rattus norvegicus GN=Rps14 PE=2 SV=3)

HSP 1 Score: 99.3673 bits (246), Expect = 1.007e-20
Identity = 53/67 (79.10%), Postives = 55/67 (82.09%), Query Frame = 3 
Query:   12 AAMLAAQDVSQRCKELGITALHIKLRAXXXXXXXXXXXXAQSALRALARSGMKIGRIEDVTPIPTDS 212
            AAMLAAQDV+QRCKELGITALHIKLRA            AQSALRALARSGMKIGRIEDVTPIP+DS
Sbjct:   73 AAMLAAQDVAQRCKELGITALHIKLRATGGNRTKTPGPGAQSALRALARSGMKIGRIEDVTPIPSDS 139
[Close]
BLAST of EY756205 vs. ExPASy Swiss-Prot
Match: RS14_MOUSE (40S ribosomal protein S14 OS=Mus musculus GN=Rps14 PE=2 SV=3)

HSP 1 Score: 99.3673 bits (246), Expect = 1.007e-20
Identity = 53/67 (79.10%), Postives = 55/67 (82.09%), Query Frame = 3 
Query:   12 AAMLAAQDVSQRCKELGITALHIKLRAXXXXXXXXXXXXAQSALRALARSGMKIGRIEDVTPIPTDS 212
            AAMLAAQDV+QRCKELGITALHIKLRA            AQSALRALARSGMKIGRIEDVTPIP+DS
Sbjct:   73 AAMLAAQDVAQRCKELGITALHIKLRATGGNRTKTPGPGAQSALRALARSGMKIGRIEDVTPIPSDS 139
[Close]
BLAST of EY756205 vs. ExPASy Swiss-Prot
Match: RS14_HUMAN (40S ribosomal protein S14 OS=Homo sapiens GN=RPS14 PE=1 SV=3)

HSP 1 Score: 99.3673 bits (246), Expect = 1.007e-20
Identity = 53/67 (79.10%), Postives = 55/67 (82.09%), Query Frame = 3 
Query:   12 AAMLAAQDVSQRCKELGITALHIKLRAXXXXXXXXXXXXAQSALRALARSGMKIGRIEDVTPIPTDS 212
            AAMLAAQDV+QRCKELGITALHIKLRA            AQSALRALARSGMKIGRIEDVTPIP+DS
Sbjct:   73 AAMLAAQDVAQRCKELGITALHIKLRATGGNRTKTPGPGAQSALRALARSGMKIGRIEDVTPIPSDS 139
[Close]
BLAST of EY756205 vs. ExPASy Swiss-Prot
Match: RS14_CRIGR (40S ribosomal protein S14 OS=Cricetulus griseus GN=RPS14 PE=2 SV=3)

HSP 1 Score: 99.3673 bits (246), Expect = 1.007e-20
Identity = 53/67 (79.10%), Postives = 55/67 (82.09%), Query Frame = 3 
Query:   12 AAMLAAQDVSQRCKELGITALHIKLRAXXXXXXXXXXXXAQSALRALARSGMKIGRIEDVTPIPTDS 212
            AAMLAAQDV+QRCKELGITALHIKLRA            AQSALRALARSGMKIGRIEDVTPIP+DS
Sbjct:   73 AAMLAAQDVAQRCKELGITALHIKLRATGGNRTKTPGPGAQSALRALARSGMKIGRIEDVTPIPSDS 139
[Close]
BLAST of EY756205 vs. ExPASy Swiss-Prot
Match: RS142_MAIZE (40S ribosomal protein S14 OS=Zea mays PE=3 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 1.007e-20
Identity = 52/67 (77.61%), Postives = 55/67 (82.09%), Query Frame = 3 
Query:   12 AAMLAAQDVSQRCKELGITALHIKLRAXXXXXXXXXXXXAQSALRALARSGMKIGRIEDVTPIPTDS 212
            AAMLA+QDV+QRCKELGITALHIKLRA            AQSALRALARSGMKIGRIEDVTP+PTDS
Sbjct:   72 AAMLASQDVAQRCKELGITALHIKLRATGGNKTKTPGPGAQSALRALARSGMKIGRIEDVTPVPTDS 138
[Close]
BLAST of EY756205 vs. ExPASy Swiss-Prot
Match: RS14_CHLRE (40S ribosomal protein S14 OS=Chlamydomonas reinhardtii GN=RPS14 PE=3 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 1.717e-20
Identity = 52/67 (77.61%), Postives = 55/67 (82.09%), Query Frame = 3 
Query:   12 AAMLAAQDVSQRCKELGITALHIKLRAXXXXXXXXXXXXAQSALRALARSGMKIGRIEDVTPIPTDS 212
            AAMLAAQDV+Q+CKELGITALHIKLRA            AQSALRALAR+GMKIGRIEDVTPIPTDS
Sbjct:   75 AAMLAAQDVAQKCKELGITALHIKLRATGGNRTKTPGPGAQSALRALARAGMKIGRIEDVTPIPTDS 141
The following BLAST results are available for this feature:
BLAST of EY756205 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 46
Match NameE-valueIdentityDescription
RS141_MAIZE4.519e-2179.1040S ribosomal protein S14 OS=Zea mays PE=3 SV=1[more]
RS143_ARATH7.709e-2177.6140S ribosomal protein S14-3 OS=Arabidopsis thalian... [more]
RS142_ARATH7.709e-2177.6140S ribosomal protein S14-2 OS=Arabidopsis thalian... [more]
RS141_ARATH7.709e-2177.6140S ribosomal protein S14-1 OS=Arabidopsis thalian... [more]
RS14_RAT1.007e-2079.1040S ribosomal protein S14 OS=Rattus norvegicus GN=... [more]
RS14_MOUSE1.007e-2079.1040S ribosomal protein S14 OS=Mus musculus GN=Rps14... [more]
RS14_HUMAN1.007e-2079.1040S ribosomal protein S14 OS=Homo sapiens GN=RPS14... [more]
RS14_CRIGR1.007e-2079.1040S ribosomal protein S14 OS=Cricetulus griseus GN... [more]
RS142_MAIZE1.007e-2077.6140S ribosomal protein S14 OS=Zea mays PE=3 SV=1[more]
RS14_CHLRE1.717e-2077.6140S ribosomal protein S14 OS=Chlamydomonas reinhar... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS13-C1-001-005-H03-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY756205 ID=EY756205; Name=EY756205; organism=Citrus sinensis; type=EST; length=503bp
CCACGCGTCCGGCAGCTATGCTTGCAGCACAAGATGTTTCTCAACGATGC
AAGGAGCTTGGCATTACTGCTCTTCATATTAAGCTCCGGGCTACTGGGGG
TAACAAAACTAAAACTCCTGGTCCAGGTGCTCAGTCAGCACTTAGAGCTC
TTGCTCGTTCTGGAATGAAGATTGGCCGCATAGAGGATGTGACTCCAATT
CCCACCGACAGTACCCGCAGAAAGGGTGGTACAAGGGGTAGAAGGTTGTA
ATTCTTTTCCTCATACCCATCCATAACGTTCAAGATGATGCCGTGGTTGC
CGAGAGTTTCACTCTCTTCTGTTAGATGCAAGACTTATTTCCCAATTTTG
TTGTTTGGAATGTCTGTAGTCTCAGATTCCTTTGTGTTAGCCTTTCCGAT
CAATTAAGTTTATACAGTGGCAAGACTAATCATTTCTCCATGAGTTTCTG
AATTTTATTGTTTATCTACATTTACAAGTATTGTGTTAAAAAAAAAAAAA
AAA
back to top