EY756201

Overview
NameEY756201
Unique NameEY756201
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length901
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig11383 contig Csv1_Contig11383:299..1200. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
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BLAST of EY756201 vs. ExPASy Swiss-Prot
Match: Y3913_ARATH (Uncharacterized protein At3g49135 OS=Arabidopsis thaliana GN=At3g49135 PE=1 SV=2)

HSP 1 Score: 218.009 bits (554), Expect = 5.858e-56
Identity = 117/257 (45.53%), Postives = 152/257 (59.14%), Query Frame = 1 
Query:    7 VREEKVQA------SASDPVKKNERTSYHPFEDIADSTLKNGEEARLTAAETSRTIIEVNSTATLMFTDFTNGGAHENIIWPDLPYVTDEHGNIYIQVKNEEDILQSLISENNFVQVIIGFDTTEMIKEMELAGLSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNWVNVL----------------XXXXXXXXMLGDWAKLETMRSSHPMYFAKKLSEVISDDPIDWMEQPPAGITIQGLLRAALIED 711
            +R+ + QA      SASDP K+  ++ YHP E+I  S  +N  ++RL+ AET+RTIIEVN+  TLM T     G HENI+WPD+PY+TD++GN+Y QVK +ED++QS+ SENN+VQVI+GFDT EMIKEMEL GLS                                     WV +L                         LGDWA LETMRS HPM+FAK+++EV S+DP+DWM+QP AG+ IQGLL   L+ED
Sbjct:   70 LRKNRTQATAEYVDSASDPEKQTGKSRYHPSEEIRASLPQNDGDSRLSPAETTRTIIEVNNKGTLMLTGSIGDGVHENILWPDIPYITDQNGNLYFQVKEDEDVMQSVTSENNYVQVIVGFDTMEMIKEMELMGLS----------DSDFETEDDESGDDDSEDTGEDEDEEEWVAILEDEDEDDDDDDDDDEDDDDSDSDESLGDWANLETMRSCHPMFFAKRMTEVASNDPVDWMDQPSAGLAIQGLLSHILVED 316
The following BLAST results are available for this feature:
BLAST of EY756201 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
Y3913_ARATH5.858e-5645.53Uncharacterized protein At3g49135 OS=Arabidopsis t... [more]
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Properties
Property NameValue
Genbank descriptionCS13-C1-001-005-G10-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY756201 ID=EY756201; Name=EY756201; organism=Citrus sinensis; type=EST; length=901bp
CCACGCGTCCGCGAAGAAAAGGTTCAAGCATCAGCTTCGGATCCTGTAAA
GAAGAATGAGAGGACAAGCTACCATCCATTTGAGGACATTGCAGATTCAA
CATTGAAGAACGGTGAGGAGGCTAGGCTTACAGCTGCAGAAACTTCTAGG
ACCATTATTGAGGTGAATAGTACGGCGACGCTGATGTTTACAGATTTTAC
CAATGGTGGAGCTCATGAGAATATTATCTGGCCAGACTTGCCTTATGTAA
CTGATGAACATGGAAATATATACATTCAAGTGAAGAATGAGGAAGATATT
TTGCAAAGCCTAATTTCAGAAAATAACTTTGTGCAAGTGATAATAGGCTT
CGATACCACAGAAATGATCAAGGAAATGGAATTAGCAGGTCTATCAGAAA
TTGACTTTGGAATTGATGAGATTGATGATGAAGACAGTGATGTTGAAGAT
GAAGATGAGGATGAGGATGAGGATGAGGATGAGGAAGATGAGGATTATGA
TGAGAATTGGGTTAATGTTCTCGAAGATGAAGATGATGAAGATGAGATGC
TTGGAGACTGGGCAAAATTGGAGACTATGCGTTCTTCTCATCCAATGTAT
TTCGCTAAAAAGCTTTCTGAGGTCATTTCAGATGATCCTATAGATTGGAT
GGAGCAACCTCCAGCTGGAATAACTATCCAGGGCCTTTTAAGGGCTGCCT
TAATTGAAGACACTCTGACATCCCAGAGCATAGNATCAGCAATCAGTATC
ATGATGTCGATAATAGTAAAAATGGTTGTGTGGGAAACATCAAGAGGATC
TTCATGNNTATCATGGGCATAGAAATGAATCAGAGCCATCCNAAAATGGG
TCAGAAGAGTCAAAGAAGATGATAAGCCTATGATGGGACTCCNTTTACAA
G
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