EY756155

Overview
NameEY756155
Unique NameEY756155
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length775
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig10258 contig Csv1_Contig10258:781..1555. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY756155 vs. ExPASy Swiss-Prot
Match: YCF39_PORPU (Uncharacterized protein ycf39 OS=Porphyra purpurea GN=ycf39 PE=3 SV=1)

HSP 1 Score: 147.902 bits (372), Expect = 5.770e-35
Identity = 67/149 (44.97%), Postives = 101/149 (67.79%), Query Frame = 3
Query:   12 WGTDAPTRIAYMDTQDIARLTFVALRNEKINGRTLTFSGPRAWTTQEVITLCERLAGQDANVTMVPVSVLRFTRQLTRFFEWTNDVADRLAFSEVLTSDTVFSVPMSETFDLLGVDAKDIITLEKYLQDYFTNILKKLKDLKAQSKQAD 458
            W T   T IAY+DTQD A+L   +L       R L   G +AWT+ E+ITLCE+L+GQ   ++ +P+S+L+  R++T+  +WT +++DRLAF+EVLTS  +F  PM+E +++L +D  ++I+LEKY Q+YF  ILK LKD+  +  Q D
Sbjct:  166 WVTGESTPIAYIDTQDAAKLVIKSLGVPSTENRILPLVGNKAWTSAEIITLCEKLSGQKTQISQIPLSLLKALRKITKTLQWTWNISDRLAFAEVLTSGEIFMAPMNEVYEILSIDKSEVISLEKYFQEYFGKILKVLKDISYEQSQQD 314          
BLAST of EY756155 vs. ExPASy Swiss-Prot
Match: YCF39_PORYE (Uncharacterized protein ycf39 OS=Porphyra yezoensis GN=ycf39 PE=3 SV=1)

HSP 1 Score: 143.28 bits (360), Expect = 1.421e-33
Identity = 66/149 (44.30%), Postives = 99/149 (66.44%), Query Frame = 3
Query:   12 WGTDAPTRIAYMDTQDIARLTFVALRNEKINGRTLTFSGPRAWTTQEVITLCERLAGQDANVTMVPVSVLRFTRQLTRFFEWTNDVADRLAFSEVLTSDTVFSVPMSETFDLLGVDAKDIITLEKYLQDYFTNILKKLKDLKAQSKQAD 458
            W T   T IAY+DTQD A+L   +L       RTL   G  AWT+ E+I LCE+L+GQ   ++ +P+ +L+  R++T+  +WT +++DRLAF+E+L+S   F+ PM E + +LG+D  ++I+LEKYLQ+YF  ILK LKD+  +  Q D
Sbjct:  166 WVTGESTPIAYIDTQDAAKLVIKSLGVPSTENRTLPLVGNPAWTSAEIIKLCEKLSGQKTQISQIPIGLLKALRRITKTLQWTWNISDRLAFAEILSSGEQFTAPMDEVYSILGIDRLEVISLEKYLQEYFGKILKVLKDITYEQGQQD 314          
BLAST of EY756155 vs. ExPASy Swiss-Prot
Match: YCF39_CYAPA (Uncharacterized protein ycf39 OS=Cyanophora paradoxa GN=ycf39 PE=3 SV=1)

HSP 1 Score: 134.806 bits (338), Expect = 5.055e-31
Identity = 65/147 (44.22%), Postives = 93/147 (63.27%), Query Frame = 3
Query:   12 WGTDAPTRIAYMDTQDIARLTFVALRNEKINGRTLTFSGPRAWTTQEVITLCERLAGQDANVTMVPVSVLRFTRQLTRFFEWTNDVADRLAFSEVLTSDTVFSVPMSETFDLLGVDAKDIITLEKYLQDYFTNILKKLKDLKAQSKQ 452
            W T   T IAYMDT DIAR T  +L  ++ N R     G R+W + ++I LCERL+GQ+A VT VP++ L   R  + FFEW  ++ADRLAF+EVL+    F+  M E + +  +++     LE YLQ+YF+ ILK+LK++ +Q  Q
Sbjct:  166 WITTESTSIAYMDTIDIARFTLRSLVLKETNNRVFPLVGTRSWNSADIIQLCERLSGQNAKVTRVPIAFLELARNTSCFFEWGWNIADRLAFTEVLSKSQFFNSSMDEVYKIFKIESTSTTILESYLQEYFSRILKRLKEINSQQSQ 312          
BLAST of EY756155 vs. ExPASy Swiss-Prot
Match: YCF39_GUITH (Uncharacterized protein ycf39 OS=Guillardia theta GN=ycf39 PE=3 SV=1)

HSP 1 Score: 130.568 bits (327), Expect = 9.533e-30
Identity = 64/150 (42.67%), Postives = 100/150 (66.67%), Query Frame = 3
Query:   12 WGTDAPTRIAYMDTQDIARLTFVALRNEKING---RTLTFSGPRAWTTQEVITLCERLAGQDANVTMVPVSVLRFTRQLTRFFEWTNDVADRLAFSEVLTSDTVFSVPMSETFDLLGVDAKDIITLEKYLQDYFTNILKKLKDLKAQSKQ 452
            W T   T+I Y+DT DIA+    A+R+  +NG   RT+   G ++W ++E+I LCERL+GQ AN+T +P+ +L F + LT FFEWT ++++RLAF+EVL +    +  M+ T+   G +  DI +LE Y+QDYF  IL++LK+L  + ++
Sbjct:  166 WITGEYTKINYIDTNDIAKF---AVRSLSLNGTIKRTIPLVGLKSWNSEEIIQLCERLSGQKANITKIPLQLLVFFKYLTGFFEWTTNISERLAFAEVLNARQDITSEMASTYSQFGFEPNDITSLESYMQDYFGRILRRLKELSDERER 312          
BLAST of EY756155 vs. ExPASy Swiss-Prot
Match: YCF39_ODOSI (Uncharacterized protein ycf39 OS=Odontella sinensis GN=ycf39 PE=3 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 1.861e-25
Identity = 54/145 (37.24%), Postives = 86/145 (59.31%), Query Frame = 3
Query:   18 TDAPTRIAYMDTQDIARLTFVALRNEKINGRTLTFSGPRAWTTQEVITLCERLAGQDANVTMVPVSVLRFTRQLTRFFEWTNDVADRLAFSEVLTSDTVFSVPMSETFDLLGVDAKDIITLEKYLQDYFTNILKKLKDLKAQSKQ 452
            T+  T ++YMDTQDIA+    +L+  +   RT    G + W + E+I LCE+LAGQ A V  +P+ +L+   Q+  FFEW  +++DRLAF+E+L  +  FS    + +    VD  +I  L+ Y  +YF  +LK+L+D+  +  Q
Sbjct:  168 TNENTCVSYMDTQDIAKFCLRSLQLPETKNRTFVLGGQKGWVSSEIINLCEQLAGQSAKVNKIPLFLLKLVSQIFGFFEWGQNISDRLAFAEILNVENDFSKSTFDLYKTFKVDDSEITQLDDYFLEYFIRLLKRLRDINFEDIQ 312          
BLAST of EY756155 vs. ExPASy Swiss-Prot
Match: YCF39_CYACA (Uncharacterized protein ycf39 OS=Cyanidium caldarium GN=ycf39 PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 5.811e-11
Identity = 40/132 (30.30%), Postives = 63/132 (47.73%), Query Frame = 3
Query:   33 RIAYMDTQDIARLTFVALRNEKINGRTLTFSGPRAWTTQEVITLCERLAGQDANVTMVPVSVLRFTRQLTRFFEWTNDVADRLAFSEVLTSDTVFSVPMSETFDLLGVDAKDIITLEKYLQDYFTNILKKLK 428
            +I+Y+D +D A +   A     +        G R+W    +I+LC+  AGQ + V  VP+ ++ F R++  FF +T      L   E L+  +  S         L +  K + +LEKY Q YFT+ L  LK
Sbjct:  175 QISYIDARDAANIVLAATSLAFLKNIDFPLIGNRSWNNVSIISLCQLYAGQASPVVTVPLLLVYFIRRILGFFAFTRQFYFYLTLVENLSRSSYLSFNHENENKFLKIYQKKLFSLEKYFQYYFTHKLGNLK 306          
The following BLAST results are available for this feature:
BLAST of EY756155 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 6
Match NameE-valueIdentityDescription
YCF39_PORPU5.770e-3544.97Uncharacterized protein ycf39 OS=Porphyra purpurea... [more]
YCF39_PORYE1.421e-3344.30Uncharacterized protein ycf39 OS=Porphyra yezoensi... [more]
YCF39_CYAPA5.055e-3144.22Uncharacterized protein ycf39 OS=Cyanophora parado... [more]
YCF39_GUITH9.533e-3042.67Uncharacterized protein ycf39 OS=Guillardia theta ... [more]
YCF39_ODOSI1.861e-2537.24Uncharacterized protein ycf39 OS=Odontella sinensi... [more]
YCF39_CYACA5.811e-1130.30Uncharacterized protein ycf39 OS=Cyanidium caldari... [more]
back to top
Properties
Property NameValue
Genbank descriptionCS13-C1-001-005-C08-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY756155 ID=EY756155; Name=EY756155; organism=Citrus sinensis; type=EST; length=775bp
CCACGCGTCCGTGGGGAACGGATGCACCAACTCGAATTGCATACATGGAC
ACTCAGGATATAGCGCGACTGACATTCGTAGCTTTACGCAATGAGAAAAT
TAATGGACGGACTCTCACCTTTTCTGGTCCTCGGGCATGGACAACACAAG
AGGTTATAACATTGTGTGAGAGGCTCGCAGGTCAAGATGCAAATGTTACC
ATGGTCCCTGTGTCTGTCTTGAGATTTACTAGGCAGCTTACACGGTTTTT
TGAGTGGACAAATGATGTTGCTGATAGACTGGCATTTTCGGAGGTTCTTA
CAAGTGATACTGTATTCTCTGTTCCAATGTCTGAGACATTCGATCTTCTC
GGTGTGGACGCTAAGGATATCATTACGCTGGAGAAATATTTGCAGGATTA
CTTCACTAACATATTGAAGAAATTGAAGGACCTCAAAGCACAATCTAAGC
AAGCTGACTTTTACATCTAAGAGAAGACCATTTTCATTGTAAATGAAACT
TTGTATGCATCTGAAATCCTAAAACAACGCAGTAGCTTTCTGTTAAAGTG
ATACAGCAAAGGCTTTTGTTTAATTATGCAAGTACCAAAGGTATCGGCTT
CATCAAGGAGCATTAGTGGTAATTTTGCTCAGGTGCTTCATATCACAGTT
TTGTTATTGTAAGGGATTTTATGTAATTAAATGATGCAGATAAGACTCAA
TAATTAATTTGTCTCATGATCAAATTAGATANGTCTATGTAAGATGGGAT
ACGTATTTCAAAAAAAAAAAAAAAA
back to top