EY756147

Overview
NameEY756147
Unique NameEY756147
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length677
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY756147 vs. ExPASy Swiss-Prot
Match: SUVH4_ARATH (Histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH4 OS=Arabidopsis thaliana GN=SUVH4 PE=1 SV=2)

HSP 1 Score: 171.014 bits (432), Expect = 5.063e-42
Identity = 83/122 (68.03%), Postives = 96/122 (78.69%), Query Frame = 3
Query:   24 LGGTHRRLRDVSISTIY-ISHRPDDQKVENTPNYCIDAGAIGNVARFINHSCEPNLFVQCVLSSHHDLKLARVVLFSADNIPPLQELTYDYGYELYSVHGPDGKVKQMVCYCGA*SCTGLLF 386
            LGG  RRLRDV++     +S   +D   EN P +CIDAG+ GN ARFINHSCEPNLFVQCVLSSH D++LARVVLF+ADNI P+QELTYDYGY L SVHGPDGKVKQ+ CYCGA +C   L+
Sbjct:  506 LGGRQRRLRDVAVPMNNGVSQSSED---ENAPEFCIDAGSTGNFARFINHSCEPNLFVQCVLSSHQDIRLARVVLFAADNISPMQELTYDYGYALDSVHGPDGKVKQLACYCGALNCRKRLY 624          
BLAST of EY756147 vs. ExPASy Swiss-Prot
Match: SUVH5_ARATH (Histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH5 OS=Arabidopsis thaliana GN=SUVH5 PE=2 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 4.456e-22
Identity = 42/89 (47.19%), Postives = 63/89 (70.79%), Query Frame = 3
Query:  120 YCIDAGAIGNVARFINHSCEPNLFVQCVLSSHHDLKLARVVLFSADNIPPLQELTYDYGYELYSVHGPDGKVKQMVCYCGA*SCTGLLF 386
            + I+A   GN+ RFINHSC PNL+ Q VL  H ++++  ++ F+ DNIPPLQEL+YDY Y++  V+  +G +K+  CYCG+  C+G L+
Sbjct:  706 FTINAAQKGNIGRFINHSCSPNLYAQDVLYDHEEIRIPHIMFFALDNIPPLQELSYDYNYKIDQVYDSNGNIKKKFCYCGSAECSGRLY 794          
BLAST of EY756147 vs. ExPASy Swiss-Prot
Match: SUVH6_ARATH (Histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH6 OS=Arabidopsis thaliana GN=SUVH6 PE=2 SV=2)

HSP 1 Score: 102.834 bits (255), Expect = 1.693e-21
Identity = 47/94 (50.00%), Postives = 59/94 (62.77%), Query Frame = 3
Query:  105 ENTPNYCIDAGAIGNVARFINHSCEPNLFVQCVLSSHHDLKLARVVLFSADNIPPLQELTYDYGYELYSVHGPDGKVKQMVCYCGA*SCTGLLF 386
            + +  + IDA + GNV RFINHSC PNL+ Q VL  H D ++  V+ F+ DNIPPLQEL YDY Y L  V    G +KQ  C+CGA  C   L+
Sbjct:  697 DESSGFTIDAASKGNVGRFINHSCSPNLYAQNVLYDHEDSRIPHVMFFAQDNIPPLQELCYDYNYALDQVRDSKGNIKQKPCFCGAAVCRRRLY 790          
BLAST of EY756147 vs. ExPASy Swiss-Prot
Match: STB1B_DANRE (Histone-lysine N-methyltransferase SETDB1-B OS=Danio rerio GN=setdb1b PE=2 SV=2)

HSP 1 Score: 82.4185 bits (202), Expect = 2.368e-15
Identity = 43/92 (46.74%), Postives = 55/92 (59.78%), Query Frame = 3
Query:  120 YCIDAGAIGNVARFINHSCEPNLFVQCVLSSHHDLKLARVVLFSADNIPPLQELTYDYGYELYSVHGPDGKVKQMVCYCGA*SCTGLLF*II 395
            Y IDA   GN+ R++NHSC PNLFVQ V    HDL+   V  F++  I    ELT+DY YE+ SV G     K+++C CG+  C G L  II
Sbjct: 1121 YIIDAKLEGNLGRYLNHSCSPNLFVQNVFVDTHDLRFPWVAFFASKRIRAGTELTWDYNYEVGSVEG-----KELLCCCGSTECRGRLLQII 1207          
BLAST of EY756147 vs. ExPASy Swiss-Prot
Match: STB1A_DANRE (Histone-lysine N-methyltransferase SETDB1-A OS=Danio rerio GN=setdb1a PE=2 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 2.368e-15
Identity = 43/88 (48.86%), Postives = 53/88 (60.23%), Query Frame = 3
Query:  120 YCIDAGAIGNVARFINHSCEPNLFVQCVLSSHHDLKLARVVLFSADNIPPLQELTYDYGYELYSVHGPDGKVKQMVCYCGA*SCTGLL 383
            Y IDA   GN+ R+INHSC PNLFVQ V    HDL+   V  F++  I    ELT+DY YE+ SV G     K ++C CG+  CTG L
Sbjct: 1353 YIIDARQEGNLGRYINHSCSPNLFVQNVFVDTHDLRFPWVAFFASKRIKAGTELTWDYNYEVGSVEG-----KVLLCCCGSLRCTGRL 1435          
BLAST of EY756147 vs. ExPASy Swiss-Prot
Match: SETB1_MOUSE (Histone-lysine N-methyltransferase SETDB1 OS=Mus musculus GN=Setdb1 PE=1 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 3.093e-15
Identity = 42/88 (47.73%), Postives = 53/88 (60.23%), Query Frame = 3
Query:  120 YCIDAGAIGNVARFINHSCEPNLFVQCVLSSHHDLKLARVVLFSADNIPPLQELTYDYGYELYSVHGPDGKVKQMVCYCGA*SCTGLL 383
            Y IDA   GN+ R++NHSC PNLFVQ V    HDL+   V  F++  I    ELT+DY YE+ SV G     K+++C CGA  C G L
Sbjct: 1224 YIIDAKLEGNLGRYLNHSCSPNLFVQNVFVDTHDLRFPWVAFFASKRIRAGTELTWDYNYEVGSVEG-----KELLCCCGAIECRGRL 1306          
BLAST of EY756147 vs. ExPASy Swiss-Prot
Match: SETB1_HUMAN (Histone-lysine N-methyltransferase SETDB1 OS=Homo sapiens GN=SETDB1 PE=1 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 3.093e-15
Identity = 42/88 (47.73%), Postives = 53/88 (60.23%), Query Frame = 3
Query:  120 YCIDAGAIGNVARFINHSCEPNLFVQCVLSSHHDLKLARVVLFSADNIPPLQELTYDYGYELYSVHGPDGKVKQMVCYCGA*SCTGLL 383
            Y IDA   GN+ R++NHSC PNLFVQ V    HDL+   V  F++  I    ELT+DY YE+ SV G     K+++C CGA  C G L
Sbjct: 1208 YIIDAKLEGNLGRYLNHSCSPNLFVQNVFVDTHDLRFPWVAFFASKRIRAGTELTWDYNYEVGSVEG-----KELLCCCGAIECRGRL 1290          
BLAST of EY756147 vs. ExPASy Swiss-Prot
Match: SETB1_XENLA (Histone-lysine N-methyltransferase SETDB1 OS=Xenopus laevis GN=setdb1 PE=2 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 8.999e-15
Identity = 41/88 (46.59%), Postives = 53/88 (60.23%), Query Frame = 3
Query:  120 YCIDAGAIGNVARFINHSCEPNLFVQCVLSSHHDLKLARVVLFSADNIPPLQELTYDYGYELYSVHGPDGKVKQMVCYCGA*SCTGLL 383
            Y IDA   GN+ R++NHSC PNLFVQ V    HDL+   V  F++  I    ELT+DY YE+ SV G     K+++C CG+  C G L
Sbjct: 1186 YIIDAKLEGNLGRYLNHSCSPNLFVQNVFVDTHDLRFPWVAFFASKRIRAGTELTWDYNYEVGSVEG-----KKLLCCCGSTECRGRL 1268          
BLAST of EY756147 vs. ExPASy Swiss-Prot
Match: MET2_CAEEL (Probable histone-lysine N-methyltransferase met-2 OS=Caenorhabditis elegans GN=met-2 PE=2 SV=3)

HSP 1 Score: 77.411 bits (189), Expect = 7.618e-14
Identity = 41/97 (42.27%), Postives = 54/97 (55.67%), Query Frame = 3
Query:   93 DQKVENTPNYCIDAGAIGNVARFINHSCEPNLFVQCVLSSHHDLKLARVVLFSADNIPPLQELTYDYGYELYSVHGPDGKVKQMVCYCGA*SCTGLL 383
            D+  E  P Y IDA   GN+ RF+NHSC+PN+ VQ V+   HDL+L  V  F+   +    ELT+DY Y             Q+ C+CGA +CTG L
Sbjct: 1222 DKYFEPFPLYVIDAKQRGNLGRFLNHSCDPNVHVQHVMYDTHDLRLPWVAFFTRKYVKAGDELTWDYQYT-----QDQTATTQLTCHCGAENCTGRL 1313          
BLAST of EY756147 vs. ExPASy Swiss-Prot
Match: SETB1_DROME (Histone-lysine N-methyltransferase eggless OS=Drosophila melanogaster GN=egg PE=1 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 6.449e-13
Identity = 39/84 (46.43%), Postives = 49/84 (58.33%), Query Frame = 3
Query:  120 YCIDAGAIGNVARFINHSCEPNLFVQCVLSSHHDLKLARVVLFSADNIPPLQELTYDYGYELYSVHGPDGKVKQMVCYCGA*SC 371
            Y +DA   GN+ R+ NHSC PNLFVQ V    HDL+   V  FSA +I    ELT++Y YE+  V G     K + C CGA +C
Sbjct: 1179 YIMDAKTTGNLGRYFNHSCSPNLFVQNVFVDTHDLRFPWVAFFSAAHIRSGTELTWNYNYEVGVVPG-----KVLYCQCGAPNC 1257          
The following BLAST results are available for this feature:
BLAST of EY756147 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 24
Match NameE-valueIdentityDescription
SUVH4_ARATH5.063e-4268.03Histone-lysine N-methyltransferase, H3 lysine-9 sp... [more]
SUVH5_ARATH4.456e-2247.19Histone-lysine N-methyltransferase, H3 lysine-9 sp... [more]
SUVH6_ARATH1.693e-2150.00Histone-lysine N-methyltransferase, H3 lysine-9 sp... [more]
STB1B_DANRE2.368e-1546.74Histone-lysine N-methyltransferase SETDB1-B OS=Dan... [more]
STB1A_DANRE2.368e-1548.86Histone-lysine N-methyltransferase SETDB1-A OS=Dan... [more]
SETB1_MOUSE3.093e-1547.73Histone-lysine N-methyltransferase SETDB1 OS=Mus m... [more]
SETB1_HUMAN3.093e-1547.73Histone-lysine N-methyltransferase SETDB1 OS=Homo ... [more]
SETB1_XENLA8.999e-1546.59Histone-lysine N-methyltransferase SETDB1 OS=Xenop... [more]
MET2_CAEEL7.618e-1442.27Probable histone-lysine N-methyltransferase met-2 ... [more]
SETB1_DROME6.449e-1346.43Histone-lysine N-methyltransferase eggless OS=Dros... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS13-C1-001-005-B09-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY756147 ID=EY756147; Name=EY756147; organism=Citrus sinensis; type=EST; length=677bp
CCACGCGTCCGCAATGAGATTGCCTTGGTGGAACACATAGGCGATTGCGT
GATGTATCCATCTCAACTATTTATATTTCACACCGACCTGATGATCAGAA
AGTTGAAAATACACCAAATTACTGCATTGACGCCGGTGCCATTGGAAATG
TTGCAAGGTTCATCAATCATAGTTGTGAGCCAAATCTATTTGTGCAATGT
GTTTTGAGCTCACATCATGATTTGAAACTTGCGCGAGTGGTGTTATTCTC
AGCAGACAACATACCTCCATTGCAGGAGCTTACTTATGACTATGGGTATG
AACTATATAGTGTCCATGGTCCGGATGGGAAGGTAAAACAGATGGTGTGC
TACTGTGGGGCATAAAGCTGTACGGGTCTGCTATTCTAGATTATTGGCAA
ATTCAGGTATTGTCCAATCTTAGCCATTTTGGTTATATAGTATTAATGCT
ACTTTTTTTTAGGTCTATTTTTGACTTCGGCTATTATCAACAATAAAGAT
CTTGCAAGTATTGATGCACCAATTGTTGCTGTCAATGGTGCTCAATTATA
GNGTGGTGTTGGTTAACTGCATATTGATGATGCTATGACTCGAGAGATAC
AATGAATAGAAAATTGGTTTAATTGTAAAACCAACATTTTGATGATTATT
TTTCTTCTTTTACATGTTGGTTTATAA
back to top