EY756144
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of EY756144 vs. ExPASy Swiss-Prot
Match: H1_MAIZE (Histone H1 OS=Zea mays PE=2 SV=2) HSP 1 Score: 84.3445 bits (207), Expect = 6.844e-16 Identity = 42/71 (59.15%), Postives = 50/71 (70.42%), Query Frame = 2 Query: 17 SRAHPPYSEMINEAITALKERTGSSQFAIAKFIEEKQKASLPNNFXXXXXXXXXXXXANGKLVKVKNSFKL 229 S H PY+EM++EAIT+LKERTGSS +AIAKF+E+K KA LP NF A GKL KVKNS+KL Sbjct: 47 SPTHLPYAEMVSEAITSLKERTGSSSYAIAKFVEDKHKAKLPPNFRKLLNVQLKKLVAGGKLTKVKNSYKL 117
BLAST of EY756144 vs. ExPASy Swiss-Prot
Match: H1_SOLLC (Histone H1 OS=Solanum lycopersicum PE=3 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 9.883e-15 Identity = 44/68 (64.71%), Postives = 48/68 (70.59%), Query Frame = 2 Query: 26 HPPYSEMINEAITALKERTGSSQFAIAKFIEEKQKASLPNNFXXXXXXXXXXXXANGKLVKVKNSFKL 229 HPPY EMI +AI LKERTGSSQ AI KFIEEKQK SLP+NF A+ KLVKVKNS+KL Sbjct: 56 HPPYFEMIKDAIVTLKERTGSSQHAITKFIEEKQK-SLPSNFKKLLLTQLKKFVASEKLVKVKNSYKL 122
BLAST of EY756144 vs. ExPASy Swiss-Prot
Match: H1_EUPES (Histone H1 OS=Euphorbia esula PE=2 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 4.905e-14 Identity = 41/74 (55.41%), Postives = 53/74 (71.62%), Query Frame = 2 Query: 8 SEKSRAHPPYSEMINEAITALKERTGSSQFAIAKFIEEKQKASLPNNFXXXXXXXXXXXXANGKLVKVKNSFKL 229 S+ + +HP + EMI++AI+ LKERTGSSQ+AI KF+E+K K LP+NF A+GKLVKVKNSFKL Sbjct: 45 SKGTSSHPSFFEMISDAISTLKERTGSSQYAINKFVEDKHK-QLPSNFRKLLLFHLKKLVASGKLVKVKNSFKL 117
BLAST of EY756144 vs. ExPASy Swiss-Prot
Match: H1_PEA (Histone H1 OS=Pisum sativum PE=2 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 6.406e-14 Identity = 41/69 (59.42%), Postives = 48/69 (69.57%), Query Frame = 2 Query: 23 AHPPYSEMINEAITALKERTGSSQFAIAKFIEEKQKASLPNNFXXXXXXXXXXXXANGKLVKVKNSFKL 229 +HP Y EMI +AI +LKE+ GSSQ+AIAKFIEEKQK LP NF A+GKL+KVK SFKL Sbjct: 61 SHPTYEEMIKDAIVSLKEKNGSSQYAIAKFIEEKQK-QLPANFKKLLLQNLKKNVASGKLIKVKGSFKL 128
BLAST of EY756144 vs. ExPASy Swiss-Prot
Match: H1_WHEAT (Histone H1 OS=Triticum aestivum PE=2 SV=2) HSP 1 Score: 77.411 bits (189), Expect = 8.366e-14 Identity = 40/69 (57.97%), Postives = 46/69 (66.67%), Query Frame = 2 Query: 23 AHPPYSEMINEAITALKERTGSSQFAIAKFIEEKQKASLPNNFXXXXXXXXXXXXANGKLVKVKNSFKL 229 AHP Y+EM++EAI ALKER+GSS AI KFIE+K KA LP NF A GKL KVK S+KL Sbjct: 54 AHPSYAEMVSEAIAALKERSGSSTIAIGKFIEDKHKAHLPANFRKILLTQIKKLVAAGKLTKVKGSYKL 122
BLAST of EY756144 vs. ExPASy Swiss-Prot
Match: H11_ARATH (Histone H1.1 OS=Arabidopsis thaliana GN=At1g06760 PE=2 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 7.082e-13 Identity = 41/69 (59.42%), Postives = 46/69 (66.67%), Query Frame = 2 Query: 23 AHPPYSEMINEAITALKERTGSSQFAIAKFIEEKQKASLPNNFXXXXXXXXXXXXANGKLVKVKNSFKL 229 +HP Y EMI +AI LKERTGSSQ+AI KFIEEK+K LP F A+GKLVKVK SFKL Sbjct: 61 SHPTYEEMIKDAIVTLKERTGSSQYAIQKFIEEKRK-ELPPTFRKLLLLNLKRLVASGKLVKVKASFKL 128
BLAST of EY756144 vs. ExPASy Swiss-Prot
Match: H1_SOLPN (Histone H1 OS=Solanum pennellii PE=2 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 2.691e-12 Identity = 35/74 (47.30%), Postives = 47/74 (63.51%), Query Frame = 2 Query: 8 SEKSRAHPPYSEMINEAITALKERTGSSQFAIAKFIEEKQKASLPNNFXXXXXXXXXXXXANGKLVKVKNSFKL 229 S K+ HPPY +MI EA+ AL E+ GSS +A+AK++E+K K LP NF A GKL+K+K S+KL Sbjct: 43 SAKAVTHPPYFQMIKEALLALNEKGGSSPYAVAKYMEDKHKDELPANFRKILGLQLKNSAAKGKLIKIKASYKL 116
BLAST of EY756144 vs. ExPASy Swiss-Prot
Match: H12_ARATH (Histone H1.2 OS=Arabidopsis thaliana GN=At2g30620 PE=1 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 4.591e-12 Identity = 40/69 (57.97%), Postives = 45/69 (65.22%), Query Frame = 2 Query: 23 AHPPYSEMINEAITALKERTGSSQFAIAKFIEEKQKASLPNNFXXXXXXXXXXXXANGKLVKVKNSFKL 229 +HP Y EMI +AI LKERTGSSQ+AI KFIEEK K SLP F A+ KLVKVK SFK+ Sbjct: 61 SHPTYEEMIKDAIVTLKERTGSSQYAIQKFIEEKHK-SLPPTFRKLLLVNLKRLVASEKLVKVKASFKI 128 The following BLAST results are available for this feature:
BLAST of EY756144 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 8
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >EY756144 ID=EY756144; Name=EY756144; organism=Citrus sinensis; type=EST; length=710bpback to top |