EY756141

Overview
NameEY756141
Unique NameEY756141
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length924
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY756141 vs. ExPASy Swiss-Prot
Match: RL9_PEA (60S ribosomal protein L9 OS=Pisum sativum GN=RPL9 PE=2 SV=1)

HSP 1 Score: 288.886 bits (738), Expect = 3.095e-81
Identity = 142/173 (82.08%), Postives = 162/173 (93.64%), Query Frame = 2
Query:   53 MKTILSSETMEIPEGVKVKINAKIIEVEGPRGKLSRNFKHLNLDFHLMTDGETGKRRLKIDAWFGSRKTSAAIRTALSHVQNLITGVTKGYRYKMRFVYAHFPINASIANADKSIEIRNFLGEKKVRRVEMLDGVTVLRSDKVKDELILDGNDIELVSRSAALINQKCHVKNK 571
            MKTILSSETM IP+GV +K+NAK+IEVEGPRGKL R+FKHLNLDF L+TD E GK++LKIDAWFGSRKTSAAIRTALSHV+NLITGVTKG+RYKMRFVYA FPINASI N +KSIEIRNFLGEKKVR+V++LDGV+++RS+KVKDE++LDGNDIELVSRS ALINQKCHVK K
Sbjct:    1 MKTILSSETMNIPDGVTIKVNAKVIEVEGPRGKLVRDFKHLNLDFDLITD-ENGKKKLKIDAWFGSRKTSAAIRTALSHVENLITGVTKGFRYKMRFVYADFPINASITNDNKSIEIRNFLGEKKVRKVDLLDGVSIIRSEKVKDEVVLDGNDIELVSRSCALINQKCHVKKK 172          

HSP 2 Score: 35.4242 bits (80), Expect = 3.095e-81
Identity = 16/21 (76.19%), Postives = 18/21 (85.71%), Query Frame = 1
Query:  571 DIXKFLDGIYVSEKGHIVGED 633
            DI KFLDGIYVSEKG +V E+
Sbjct:  173 DIRKFLDGIYVSEKGAVVVEE 193          
BLAST of EY756141 vs. ExPASy Swiss-Prot
Match: RL91_ARATH (60S ribosomal protein L9-1 OS=Arabidopsis thaliana GN=RPL9B PE=2 SV=3)

HSP 1 Score: 286.574 bits (732), Expect = 3.382e-80
Identity = 138/173 (79.77%), Postives = 160/173 (92.49%), Query Frame = 2
Query:   53 MKTILSSETMEIPEGVKVKINAKIIEVEGPRGKLSRNFKHLNLDFHLMTDGETGKRRLKIDAWFGSRKTSAAIRTALSHVQNLITGVTKGYRYKMRFVYAHFPINASIANADKSIEIRNFLGEKKVRRVEMLDGVTVLRSDKVKDELILDGNDIELVSRSAALINQKCHVKNK 571
            MKTILSSETM+IP+ V +K++AK+IEVEGPRGKL R+FKHLNLDF L+ D ETGK++LKID+WFG+RKTSA+IRTALSHV NLI+GVT+G+RYKMRFVYAHFPINASI    KSIEIRNFLGEKKVR+VEMLDGVT++RS+KVKDE++LDGNDIELVSRS ALINQKCHVK K
Sbjct:    1 MKTILSSETMDIPDSVTIKVHAKVIEVEGPRGKLVRDFKHLNLDFQLIKDPETGKKKLKIDSWFGTRKTSASIRTALSHVDNLISGVTRGFRYKMRFVYAHFPINASIGGDGKSIEIRNFLGEKKVRKVEMLDGVTIVRSEKVKDEIVLDGNDIELVSRSCALINQKCHVKKK 173          

HSP 2 Score: 34.2686 bits (77), Expect = 3.382e-80
Identity = 16/21 (76.19%), Postives = 17/21 (80.95%), Query Frame = 1
Query:  571 DIXKFLDGIYVSEKGHIVGED 633
            DI KFLDGIYVSEK  IV E+
Sbjct:  174 DIRKFLDGIYVSEKSKIVEEE 194          
BLAST of EY756141 vs. ExPASy Swiss-Prot
Match: RL92_ARATH (60S ribosomal protein L9-2 OS=Arabidopsis thaliana GN=RPL9D PE=2 SV=1)

HSP 1 Score: 283.108 bits (723), Expect = 2.833e-79
Identity = 138/173 (79.77%), Postives = 159/173 (91.91%), Query Frame = 2
Query:   53 MKTILSSETMEIPEGVKVKINAKIIEVEGPRGKLSRNFKHLNLDFHLMTDGETGKRRLKIDAWFGSRKTSAAIRTALSHVQNLITGVTKGYRYKMRFVYAHFPINASIANADKSIEIRNFLGEKKVRRVEMLDGVTVLRSDKVKDELILDGNDIELVSRSAALINQKCHVKNK 571
            MKTILSSETM+IP+GV +K+NAK+IEVEGPRGKL+R+FKHLNLDF L+ D  TGKR+LKID+WFGSRKTSA+IRTALSHV NLI GVT+G+ Y+MRFVYAHFPINASI   +KSIEIRNFLGEKKVR+VEMLDGV ++RS+KVKDE+IL+GNDIELVSRS ALINQKCHVK K
Sbjct:    1 MKTILSSETMDIPDGVAIKVNAKVIEVEGPRGKLTRDFKHLNLDFQLIKDQVTGKRQLKIDSWFGSRKTSASIRTALSHVDNLIAGVTQGFLYRMRFVYAHFPINASIDGNNKSIEIRNFLGEKKVRKVEMLDGVKIVRSEKVKDEIILEGNDIELVSRSCALINQKCHVKKK 173          

HSP 2 Score: 34.6538 bits (78), Expect = 2.833e-79
Identity = 16/21 (76.19%), Postives = 17/21 (80.95%), Query Frame = 1
Query:  571 DIXKFLDGIYVSEKGHIVGED 633
            DI KFLDGIYVSEKG I  E+
Sbjct:  174 DIRKFLDGIYVSEKGKIAVEE 194          
BLAST of EY756141 vs. ExPASy Swiss-Prot
Match: RL9_ORYSJ (60S ribosomal protein L9 OS=Oryza sativa subsp. japonica GN=RPL9 PE=2 SV=3)

HSP 1 Score: 283.878 bits (725), Expect = 8.939e-76
Identity = 142/192 (73.96%), Postives = 166/192 (86.46%), Query Frame = 2
Query:   53 MKTILSSETMEIPEGVKVKINAKIIEVEGPRGKLSRNFKHLNLDFHLMTDGETGKRRLKIDAWFGSRKTSAAIRTALSHVQNLITGVTKGYRYKMRFVYAHFPINASIANADKSIEIRNFLGEKKVRRVEMLDGVTVLRSDKVKDELILDGNDIELVSRSAALINQKCHVKNKISXNS*TGSMSVRRGTLLE 628
            MKTIL+SETMEIPEGV V++ AK++ VEGPRGKL+RNFKHLNLDF L+  G    R+L++DAWFG+R+T AAIRTA+SHVQNLITGVTKGYRYKMRFVYAHFPINASI N++ +IEIRNFLGEKKVR+V+ML+GVT+LRS+KVKDEL+LDGNDIELVSRSAALINQKCHVKNK       G     +GT+ E
Sbjct:    1 MKTILASETMEIPEGVTVQVAAKVVTVEGPRGKLTRNFKHLNLDFQLLEGG----RKLQVDAWFGTRRTMAAIRTAISHVQNLITGVTKGYRYKMRFVYAHFPINASITNSNTAIEIRNFLGEKKVRKVDMLEGVTILRSEKVKDELVLDGNDIELVSRSAALINQKCHVKNKDIRKFLDGIYVSDKGTITE 188          
BLAST of EY756141 vs. ExPASy Swiss-Prot
Match: RL9_MOUSE (60S ribosomal protein L9 OS=Mus musculus GN=Rpl9 PE=2 SV=2)

HSP 1 Score: 189.889 bits (481), Expect = 8.381e-51
Identity = 97/173 (56.07%), Postives = 123/173 (71.10%), Query Frame = 2
Query:   53 MKTILSSETMEIPEGVKVKINAKIIEVEGPRGKLSRNFKHLNLDFHLMTDGETGKRRLKIDAWFGSRKTSAAIRTALSHVQNLITGVTKGYRYKMRFVYAHFPINASIANADKSIEIRNFLGEKKVRRVEMLDGVTVLRSDKVKDELILDGNDIELVSRSAALINQKCHVKNK 571
            MKTILS++T++IPE V++ +  + + V+GPRG L R+F H+N++  L+      K+RL++D W+G+RK  A +RT  SHVQN+I GVT G+RYKMR VYAHFPIN  I      +EIRNFLGEK +RRV M  GV    S   KDELIL+GNDIELVS SAALI Q   VKNK
Sbjct:    1 MKTILSNQTVDIPENVEITLKGRTVIVKGPRGTLRRDFNHINVELSLLGKK---KKRLRVDKWWGNRKELATVRTICSHVQNMIKGVTLGFRYKMRSVYAHFPINVVIQENGSLVEIRNFLGEKYIRRVRMRTGVACSVSQAQKDELILEGNDIELVSNSAALIQQATTVKNK 170          

HSP 2 Score: 32.7278 bits (73), Expect = 8.381e-51
Identity = 15/21 (71.43%), Postives = 16/21 (76.19%), Query Frame = 1
Query:  571 DIXKFLDGIYVSEKGHIVGED 633
            DI KFLDGIYVSEKG +   D
Sbjct:  171 DIRKFLDGIYVSEKGTVQQAD 191          
BLAST of EY756141 vs. ExPASy Swiss-Prot
Match: RL9_MACFA (60S ribosomal protein L9 OS=Macaca fascicularis GN=RPL9 PE=2 SV=1)

HSP 1 Score: 189.504 bits (480), Expect = 1.093e-50
Identity = 98/173 (56.65%), Postives = 122/173 (70.52%), Query Frame = 2
Query:   53 MKTILSSETMEIPEGVKVKINAKIIEVEGPRGKLSRNFKHLNLDFHLMTDGETGKRRLKIDAWFGSRKTSAAIRTALSHVQNLITGVTKGYRYKMRFVYAHFPINASIANADKSIEIRNFLGEKKVRRVEMLDGVTVLRSDKVKDELILDGNDIELVSRSAALINQKCHVKNK 571
            MKTILS++T++IPE V + +  + + V+GPRG L R+F H+N++  L+      K+RL++D W+G+RK  A IRT  SHVQN+I GVT G+RYKMR VYAHFPIN  I      +EIRNFLGEK +RRV M  GV    S   KDELIL+GNDIELVS SAALI Q   VKNK
Sbjct:    1 MKTILSNQTVDIPENVDITLKGRTVIVKGPRGTLRRDFNHINVELSLLGKK---KKRLRVDKWWGNRKELATIRTICSHVQNMIKGVTLGFRYKMRSVYAHFPINVVIQENGSLVEIRNFLGEKYIRRVRMRPGVACSVSQAQKDELILEGNDIELVSNSAALIQQATTVKNK 170          

HSP 2 Score: 32.7278 bits (73), Expect = 1.093e-50
Identity = 15/21 (71.43%), Postives = 16/21 (76.19%), Query Frame = 1
Query:  571 DIXKFLDGIYVSEKGHIVGED 633
            DI KFLDGIYVSEKG +   D
Sbjct:  171 DIRKFLDGIYVSEKGTVQQAD 191          
BLAST of EY756141 vs. ExPASy Swiss-Prot
Match: RL9_BOVIN (60S ribosomal protein L9 OS=Bos taurus GN=RPL9 PE=2 SV=1)

HSP 1 Score: 189.504 bits (480), Expect = 1.093e-50
Identity = 97/173 (56.07%), Postives = 122/173 (70.52%), Query Frame = 2
Query:   53 MKTILSSETMEIPEGVKVKINAKIIEVEGPRGKLSRNFKHLNLDFHLMTDGETGKRRLKIDAWFGSRKTSAAIRTALSHVQNLITGVTKGYRYKMRFVYAHFPINASIANADKSIEIRNFLGEKKVRRVEMLDGVTVLRSDKVKDELILDGNDIELVSRSAALINQKCHVKNK 571
            MKTILS++T++IPE V + +  + + V+GPRG L R+F H+N++  L+      K+RL++D W+G+RK  A +RT  SHVQN+I GVT G+RYKMR VYAHFPIN  I      +EIRNFLGEK +RRV M  GV    S   KDELIL+GNDIELVS SAALI Q   VKNK
Sbjct:    1 MKTILSNQTVDIPENVDINLKGRTVIVKGPRGTLRRDFNHINVELSLLGKK---KKRLRVDKWWGNRKELATVRTICSHVQNMIKGVTLGFRYKMRSVYAHFPINVVIQENGSLVEIRNFLGEKYIRRVRMRPGVACSVSQAQKDELILEGNDIELVSNSAALIQQATTVKNK 170          

HSP 2 Score: 32.7278 bits (73), Expect = 1.093e-50
Identity = 15/21 (71.43%), Postives = 16/21 (76.19%), Query Frame = 1
Query:  571 DIXKFLDGIYVSEKGHIVGED 633
            DI KFLDGIYVSEKG +   D
Sbjct:  171 DIRKFLDGIYVSEKGTVQQAD 191          
BLAST of EY756141 vs. ExPASy Swiss-Prot
Match: RL9_RAT (60S ribosomal protein L9 OS=Rattus norvegicus GN=Rpl9 PE=1 SV=1)

HSP 1 Score: 189.119 bits (479), Expect = 1.424e-50
Identity = 97/173 (56.07%), Postives = 122/173 (70.52%), Query Frame = 2
Query:   53 MKTILSSETMEIPEGVKVKINAKIIEVEGPRGKLSRNFKHLNLDFHLMTDGETGKRRLKIDAWFGSRKTSAAIRTALSHVQNLITGVTKGYRYKMRFVYAHFPINASIANADKSIEIRNFLGEKKVRRVEMLDGVTVLRSDKVKDELILDGNDIELVSRSAALINQKCHVKNK 571
            MKTILS++T++IPE V + +  + + V+GPRG L R+F H+N++  L+      K+RL++D W+G+RK  A +RT  SHVQN+I GVT G+RYKMR VYAHFPIN  I      +EIRNFLGEK +RRV M  GV    S   KDELIL+GNDIELVS SAALI Q   VKNK
Sbjct:    1 MKTILSNQTVDIPENVDITLKGRTVIVKGPRGTLRRDFNHINVELSLLGKK---KKRLRVDKWWGNRKELATVRTICSHVQNMIKGVTLGFRYKMRSVYAHFPINVVIQENGSLVEIRNFLGEKYIRRVRMRTGVACSVSQAQKDELILEGNDIELVSNSAALIQQATTVKNK 170          

HSP 2 Score: 32.7278 bits (73), Expect = 1.424e-50
Identity = 15/21 (71.43%), Postives = 16/21 (76.19%), Query Frame = 1
Query:  571 DIXKFLDGIYVSEKGHIVGED 633
            DI KFLDGIYVSEKG +   D
Sbjct:  171 DIRKFLDGIYVSEKGTVQQPD 191          
BLAST of EY756141 vs. ExPASy Swiss-Prot
Match: RL9_HUMAN (60S ribosomal protein L9 OS=Homo sapiens GN=RPL9 PE=1 SV=1)

HSP 1 Score: 189.119 bits (479), Expect = 1.424e-50
Identity = 97/173 (56.07%), Postives = 122/173 (70.52%), Query Frame = 2
Query:   53 MKTILSSETMEIPEGVKVKINAKIIEVEGPRGKLSRNFKHLNLDFHLMTDGETGKRRLKIDAWFGSRKTSAAIRTALSHVQNLITGVTKGYRYKMRFVYAHFPINASIANADKSIEIRNFLGEKKVRRVEMLDGVTVLRSDKVKDELILDGNDIELVSRSAALINQKCHVKNK 571
            MKTILS++T++IPE V + +  + + V+GPRG L R+F H+N++  L+      K+RL++D W+G+RK  A +RT  SHVQN+I GVT G+RYKMR VYAHFPIN  I      +EIRNFLGEK +RRV M  GV    S   KDELIL+GNDIELVS SAALI Q   VKNK
Sbjct:    1 MKTILSNQTVDIPENVDITLKGRTVIVKGPRGTLRRDFNHINVELSLLGKK---KKRLRVDKWWGNRKELATVRTICSHVQNMIKGVTLGFRYKMRSVYAHFPINVVIQENGSLVEIRNFLGEKYIRRVRMRPGVACSVSQAQKDELILEGNDIELVSNSAALIQQATTVKNK 170          

HSP 2 Score: 32.7278 bits (73), Expect = 1.424e-50
Identity = 15/21 (71.43%), Postives = 16/21 (76.19%), Query Frame = 1
Query:  571 DIXKFLDGIYVSEKGHIVGED 633
            DI KFLDGIYVSEKG +   D
Sbjct:  171 DIRKFLDGIYVSEKGTVQQAD 191          
BLAST of EY756141 vs. ExPASy Swiss-Prot
Match: RL9_PONAB (60S ribosomal protein L9 OS=Pongo abelii GN=RPL9 PE=2 SV=1)

HSP 1 Score: 187.963 bits (476), Expect = 3.154e-50
Identity = 97/173 (56.07%), Postives = 121/173 (69.94%), Query Frame = 2
Query:   53 MKTILSSETMEIPEGVKVKINAKIIEVEGPRGKLSRNFKHLNLDFHLMTDGETGKRRLKIDAWFGSRKTSAAIRTALSHVQNLITGVTKGYRYKMRFVYAHFPINASIANADKSIEIRNFLGEKKVRRVEMLDGVTVLRSDKVKDELILDGNDIELVSRSAALINQKCHVKNK 571
            MKTILS++T++IPE V + +  + + V+GPRG L R+F H+N++  L+      K+RL++D W+G+RK  A +RT  SHVQN+I GVT G+RYKMR VYAHFPIN  I      +EIRNFLGEK +RRV M  GV    S   KDELIL GNDIELVS SAALI Q   VKNK
Sbjct:    1 MKTILSNQTVDIPENVDITLKGRTVIVKGPRGTLRRDFNHINVELSLLGKK---KKRLRVDEWWGNRKELATVRTICSHVQNMIKGVTLGFRYKMRSVYAHFPINVVIQENGSLVEIRNFLGEKYIRRVRMRPGVACSVSQAQKDELILGGNDIELVSNSAALIQQATTVKNK 170          

HSP 2 Score: 32.7278 bits (73), Expect = 3.154e-50
Identity = 15/21 (71.43%), Postives = 16/21 (76.19%), Query Frame = 1
Query:  571 DIXKFLDGIYVSEKGHIVGED 633
            DI KFLDGIYVSEKG +   D
Sbjct:  171 DIRKFLDGIYVSEKGTVQQAD 191          
The following BLAST results are available for this feature:
BLAST of EY756141 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 62
Match NameE-valueIdentityDescription
RL9_PEA3.095e-8182.0860S ribosomal protein L9 OS=Pisum sativum GN=RPL9 ... [more]
RL91_ARATH3.382e-8079.7760S ribosomal protein L9-1 OS=Arabidopsis thaliana... [more]
RL92_ARATH2.833e-7979.7760S ribosomal protein L9-2 OS=Arabidopsis thaliana... [more]
RL9_ORYSJ8.939e-7673.9660S ribosomal protein L9 OS=Oryza sativa subsp. ja... [more]
RL9_MOUSE8.381e-5156.0760S ribosomal protein L9 OS=Mus musculus GN=Rpl9 P... [more]
RL9_MACFA1.093e-5056.6560S ribosomal protein L9 OS=Macaca fascicularis GN... [more]
RL9_BOVIN1.093e-5056.0760S ribosomal protein L9 OS=Bos taurus GN=RPL9 PE=... [more]
RL9_RAT1.424e-5056.0760S ribosomal protein L9 OS=Rattus norvegicus GN=R... [more]
RL9_HUMAN1.424e-5056.0760S ribosomal protein L9 OS=Homo sapiens GN=RPL9 P... [more]
RL9_PONAB3.154e-5056.0760S ribosomal protein L9 OS=Pongo abelii GN=RPL9 P... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS13-C1-001-005-B02-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY756141 ID=EY756141; Name=EY756141; organism=Citrus sinensis; type=EST; length=924bp
CCACGCGTCCGGGAAGGAGCTGAGACGCAGCAGAGGCAGAGCAGCTTTCA
TCATGAAGACAATACTTTCTTCAGAGACGATGGAGATCCCAGAGGGGGTG
AAAGTAAAGATAAATGCGAAGATAATAGAAGTAGAAGGACCTAGAGGTAA
GCTTAGCCGCAATTTCAAGCATTTGAACCTAGACTTCCATCTCATGACTG
ATGGGGAAACTGGGAAGCGGAGGCTGAAGATCGACGCATGGTTTGGGTCT
CGCAAGACCAGTGCCGCCATCAGAACTGCCCTCAGCCATGTACAGAACCT
CATCACTGGGGTTACCAAGGGCTACCGTTACAAGATGAGATTCGTCTACG
CTCACTTTCCCATCAACGCCTCCATCGCCAACGCTGACAAGTCCATTGAG
ATCCGTAACTTTCTTGGAGAAAAGAAGGTTCGAAGAGTGGAAATGCTTGA
CGGTGTTACCGTTCTTCGGTCTGACAAGGTTAAGGATGAACTCATTCTTG
ATGGGAATGACATTGAACTTGTGTCGCGGTCCGCTGCTTTGATCAATCAG
AAATGCCATGTGAAGAATAAGATATCANGAAATTCTTAGACGGGATCTAT
GTCAGTGAGAAGGGGCACATTGTTGGAGAGGATTANGTAGCTTTCAAATT
TTATGTCACATTATTATCATGAAATTGGTATCAATCTTTGCTCTTTTGCC
CTGNGNTGGGGGAAGTCCTTTATTTTTTTTCGTTGGGATTTTGGTATTAG
AGAGTTTTGATTTCTGCTTCACTCATGTACCTTTGTTCCATATGGATCCA
ATGGATTTATACCTAAAAAAAAAAAAAAAAAAAAAAAGGGCGGGCGCTCA
AAGGATCCAACTTACGTAACCGGGATGCAACGCATAACTCTTCATAAGGG
CCCCAAAATCATTCCCTTGCCGCC
back to top