EY756124

Overview
NameEY756124
Unique NameEY756124
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length875
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY756124 vs. ExPASy Swiss-Prot
Match: GLNA2_DAUCA (Glutamine synthetase, chloroplastic OS=Daucus carota GN=GLN2 PE=2 SV=1)

HSP 1 Score: 389.037 bits (998), Expect = 1.825e-107
Identity = 181/196 (92.35%), Postives = 192/196 (97.96%), Query Frame = 2
Query:   11 GADNSFGRDIADAHYKACLYAGINISGTNGEVMPGQWEYQVGPSVGIDAGDHIWCSRYLLERITEQAGVVLSLDPKPIEGDWNGAGCHTNYSTKSTREEGGYETIKKAILNLSLRHKEHISAYGEGNERRLTGKHETASIDSFSWGVANRGCSIRVGRETEKQGKGYLEDRRPASNMDPYVVTSLLAETTILWEPT 598
            GAD SFGRDI+DAHYKACLYAGINISGTNGEVMPGQWE+QVGPSVGI+AGDHIWC+RYLLERITEQAGVVL+LDPKPI+GDWNGAGCHTNYSTKS REEGG+E IKKAILNLSLRHKEHISAYGEGNERRLTGKHETASIDSFSWGVA+RGCSIRVGR+TEK+GKGYLEDRRPASNMDPYVVT LLAETT+LWEPT
Sbjct:  222 GADKSFGRDISDAHYKACLYAGINISGTNGEVMPGQWEFQVGPSVGIEAGDHIWCARYLLERITEQAGVVLTLDPKPIDGDWNGAGCHTNYSTKSMREEGGFEVIKKAILNLSLRHKEHISAYGEGNERRLTGKHETASIDSFSWGVADRGCSIRVGRDTEKEGKGYLEDRRPASNMDPYVVTGLLAETTLLWEPT 417          
BLAST of EY756124 vs. ExPASy Swiss-Prot
Match: GLNA2_ARATH (Glutamine synthetase, chloroplastic/mitochondrial OS=Arabidopsis thaliana GN=GLN2 PE=1 SV=1)

HSP 1 Score: 385.956 bits (990), Expect = 1.545e-106
Identity = 179/196 (91.33%), Postives = 190/196 (96.94%), Query Frame = 2
Query:   11 GADNSFGRDIADAHYKACLYAGINISGTNGEVMPGQWEYQVGPSVGIDAGDHIWCSRYLLERITEQAGVVLSLDPKPIEGDWNGAGCHTNYSTKSTREEGGYETIKKAILNLSLRHKEHISAYGEGNERRLTGKHETASIDSFSWGVANRGCSIRVGRETEKQGKGYLEDRRPASNMDPYVVTSLLAETTILWEPT 598
            GAD  +GRDI+DAHYKACLYAGINISGTNGEVMPGQWE+QVGPSVGIDAGDH+WC+RYLLERITEQAGVVL+LDPKPIEGDWNGAGCHTNYSTKS REEGG+E IKKAILNLSLRHKEHISAYGEGNERRLTGKHETASID FSWGVANRGCSIRVGR+TE +GKGYLEDRRPASNMDPY+VTSLLAETT+LWEPT
Sbjct:  220 GADKIWGRDISDAHYKACLYAGINISGTNGEVMPGQWEFQVGPSVGIDAGDHVWCARYLLERITEQAGVVLTLDPKPIEGDWNGAGCHTNYSTKSMREEGGFEVIKKAILNLSLRHKEHISAYGEGNERRLTGKHETASIDQFSWGVANRGCSIRVGRDTEAKGKGYLEDRRPASNMDPYIVTSLLAETTLLWEPT 415          
BLAST of EY756124 vs. ExPASy Swiss-Prot
Match: GLNA4_PHAVU (Glutamine synthetase leaf isozyme, chloroplastic OS=Phaseolus vulgaris PE=2 SV=1)

HSP 1 Score: 385.185 bits (988), Expect = 2.635e-106
Identity = 180/196 (91.84%), Postives = 191/196 (97.45%), Query Frame = 2
Query:   11 GADNSFGRDIADAHYKACLYAGINISGTNGEVMPGQWEYQVGPSVGIDAGDHIWCSRYLLERITEQAGVVLSLDPKPIEGDWNGAGCHTNYSTKSTREEGGYETIKKAILNLSLRHKEHISAYGEGNERRLTGKHETASIDSFSWGVANRGCSIRVGRETEKQGKGYLEDRRPASNMDPYVVTSLLAETTILWEPT 598
            GAD SFGRDI+DAHYKACL+AGINISGTNGEVMPGQWEYQVGPSVGI+AGDHIW SRY+LERITEQAGVVLSLDPKPIEGDWNGAGCHTNYSTKS RE+GG+E IKKAILNLSLRHKEHISAYGEGNERRLTGKHETASI++FSWGVANRGCSIRVGR+TEK GKGYLEDRRPASNMDPYVVTSLLAE+T+LWEPT
Sbjct:  219 GADKSFGRDISDAHYKACLFAGINISGTNGEVMPGQWEYQVGPSVGIEAGDHIWASRYILERITEQAGVVLSLDPKPIEGDWNGAGCHTNYSTKSMREDGGFEVIKKAILNLSLRHKEHISAYGEGNERRLTGKHETASINTFSWGVANRGCSIRVGRDTEKNGKGYLEDRRPASNMDPYVVTSLLAESTLLWEPT 414          
BLAST of EY756124 vs. ExPASy Swiss-Prot
Match: GLNAC_BRANA (Glutamine synthetase, chloroplastic OS=Brassica napus GN=GLN2 PE=2 SV=1)

HSP 1 Score: 384.03 bits (985), Expect = 5.871e-106
Identity = 177/196 (90.31%), Postives = 191/196 (97.45%), Query Frame = 2
Query:   11 GADNSFGRDIADAHYKACLYAGINISGTNGEVMPGQWEYQVGPSVGIDAGDHIWCSRYLLERITEQAGVVLSLDPKPIEGDWNGAGCHTNYSTKSTREEGGYETIKKAILNLSLRHKEHISAYGEGNERRLTGKHETASIDSFSWGVANRGCSIRVGRETEKQGKGYLEDRRPASNMDPYVVTSLLAETTILWEPT 598
            GA+ S+GRDI+DAHYKACLYAGINISGTNGEVMPGQWE+QVGPSVGI+AGDH+WC+RYLLERITEQAGVVL+LDPKPIEGDWNGAGCHTNYSTKS RE+GG+E IKKAILNLSLRH EHISAYGEGNERRLTGKHETASID FSWGVANRGCSIRVGR+TEK+GKGYLEDRRPASNMDPY+VTSLLAETT+LWEPT
Sbjct:  218 GAEKSWGRDISDAHYKACLYAGINISGTNGEVMPGQWEFQVGPSVGIEAGDHVWCARYLLERITEQAGVVLTLDPKPIEGDWNGAGCHTNYSTKSMREDGGFEVIKKAILNLSLRHMEHISAYGEGNERRLTGKHETASIDQFSWGVANRGCSIRVGRDTEKKGKGYLEDRRPASNMDPYIVTSLLAETTLLWEPT 413          
BLAST of EY756124 vs. ExPASy Swiss-Prot
Match: GLNA2_MEDSA (Glutamine synthetase leaf isozyme, chloroplastic OS=Medicago sativa GN=GS2 PE=2 SV=1)

HSP 1 Score: 380.178 bits (975), Expect = 8.477e-105
Identity = 177/196 (90.31%), Postives = 189/196 (96.43%), Query Frame = 2
Query:   11 GADNSFGRDIADAHYKACLYAGINISGTNGEVMPGQWEYQVGPSVGIDAGDHIWCSRYLLERITEQAGVVLSLDPKPIEGDWNGAGCHTNYSTKSTREEGGYETIKKAILNLSLRHKEHISAYGEGNERRLTGKHETASIDSFSWGVANRGCSIRVGRETEKQGKGYLEDRRPASNMDPYVVTSLLAETTILWEPT 598
            GAD SFGRDI+DAHYKACLYAGINISGTNGEVMPGQWEYQVGPSVGI+AGDHIW SRY+LERITEQAGVVL+LDPKPIEGDWNGAGCHTNYSTKS RE+GG+E IKKAILNLSLRHK HI AYGEGNERRLTGKHETASI++FSWGVANRGCSIRVGR+TEK GKGYLEDRRPASNMDPYVVT+LLAE+T+LWEPT
Sbjct:  218 GADKSFGRDISDAHYKACLYAGINISGTNGEVMPGQWEYQVGPSVGIEAGDHIWASRYILERITEQAGVVLTLDPKPIEGDWNGAGCHTNYSTKSMREDGGFEVIKKAILNLSLRHKVHIEAYGEGNERRLTGKHETASINTFSWGVANRGCSIRVGRDTEKNGKGYLEDRRPASNMDPYVVTALLAESTLLWEPT 413          
BLAST of EY756124 vs. ExPASy Swiss-Prot
Match: GLNA2_PEA (Glutamine synthetase leaf isozyme, chloroplastic OS=Pisum sativum GN=GS2 PE=2 SV=2)

HSP 1 Score: 378.637 bits (971), Expect = 2.467e-104
Identity = 176/196 (89.80%), Postives = 188/196 (95.92%), Query Frame = 2
Query:   11 GADNSFGRDIADAHYKACLYAGINISGTNGEVMPGQWEYQVGPSVGIDAGDHIWCSRYLLERITEQAGVVLSLDPKPIEGDWNGAGCHTNYSTKSTREEGGYETIKKAILNLSLRHKEHISAYGEGNERRLTGKHETASIDSFSWGVANRGCSIRVGRETEKQGKGYLEDRRPASNMDPYVVTSLLAETTILWEPT 598
            GAD SFGRDI+DAHYKAC+YAGINISGTNGEVMPGQWEYQVGPSVGI+AGDHIW SRY+LERITEQAGVVL+LDPKPIEGDWNGAGCHTNYSTKS RE+GG+E IKKAILNLSLRHK HI AYGEGNERRLTGKHETASI+ FSWGVANRGCSIRVGR+TEK GKGYLEDRRPASNMDPYVVT+LLAE+T+LWEPT
Sbjct:  220 GADKSFGRDISDAHYKACIYAGINISGTNGEVMPGQWEYQVGPSVGIEAGDHIWASRYILERITEQAGVVLTLDPKPIEGDWNGAGCHTNYSTKSMREDGGFEVIKKAILNLSLRHKIHIEAYGEGNERRLTGKHETASINDFSWGVANRGCSIRVGRDTEKNGKGYLEDRRPASNMDPYVVTALLAESTLLWEPT 415          
BLAST of EY756124 vs. ExPASy Swiss-Prot
Match: GLNA2_ORYSJ (Glutamine synthetase, chloroplastic OS=Oryza sativa subsp. japonica GN=GLN2 PE=1 SV=1)

HSP 1 Score: 375.941 bits (964), Expect = 1.599e-103
Identity = 176/196 (89.80%), Postives = 188/196 (95.92%), Query Frame = 2
Query:   11 GADNSFGRDIADAHYKACLYAGINISGTNGEVMPGQWEYQVGPSVGIDAGDHIWCSRYLLERITEQAGVVLSLDPKPIEGDWNGAGCHTNYSTKSTREEGGYETIKKAILNLSLRHKEHISAYGEGNERRLTGKHETASIDSFSWGVANRGCSIRVGRETEKQGKGYLEDRRPASNMDPYVVTSLLAETTILWEPT 598
            G+D SFGRDI+DAHYKACLYAGINISGTNGEVMPGQWEYQVGPSVGI+AGDHIW SRY+LERITEQAGVVL+LDPKPI+GDWNGAGCHTNYSTKS RE+GG+E IKKAILNLSLRH  HISAYGEGNERRLTG HETASID+FSWGVANRGCSIRVGR+TE +GKGYLEDRRPASNMDPYVVT+LLAETTILWEPT
Sbjct:  218 GSDKSFGRDISDAHYKACLYAGINISGTNGEVMPGQWEYQVGPSVGIEAGDHIWISRYILERITEQAGVVLTLDPKPIQGDWNGAGCHTNYSTKSMREDGGFEVIKKAILNLSLRHDLHISAYGEGNERRLTGLHETASIDNFSWGVANRGCSIRVGRDTEAKGKGYLEDRRPASNMDPYVVTALLAETTILWEPT 413          
BLAST of EY756124 vs. ExPASy Swiss-Prot
Match: GLNAC_MAIZE (Glutamine synthetase, chloroplastic OS=Zea mays GN=GLN2 PE=2 SV=1)

HSP 1 Score: 370.933 bits (951), Expect = 5.143e-102
Identity = 172/196 (87.76%), Postives = 187/196 (95.41%), Query Frame = 2
Query:   11 GADNSFGRDIADAHYKACLYAGINISGTNGEVMPGQWEYQVGPSVGIDAGDHIWCSRYLLERITEQAGVVLSLDPKPIEGDWNGAGCHTNYSTKSTREEGGYETIKKAILNLSLRHKEHISAYGEGNERRLTGKHETASIDSFSWGVANRGCSIRVGRETEKQGKGYLEDRRPASNMDPYVVTSLLAETTILWEPT 598
            GAD SFGRDI+DAHYKACLYAGINISGTNGEVMPGQWEYQVGPSVGI+AGDHIW SRY+LERITEQAGVVL+LDPKPI+GDWNGAGCHTNYSTK+ RE+GG+E IK+AILNLSLRH  HISAYGEGNERRLTGKHETASI +FSWGVANRGCSIRVGR+TE +GKGYLEDRRPASNMDPY+VT LLAETTILW+P+
Sbjct:  213 GADKSFGRDISDAHYKACLYAGINISGTNGEVMPGQWEYQVGPSVGIEAGDHIWISRYILERITEQAGVVLTLDPKPIQGDWNGAGCHTNYSTKTMREDGGFEEIKRAILNLSLRHDLHISAYGEGNERRLTGKHETASIGTFSWGVANRGCSIRVGRDTEAKGKGYLEDRRPASNMDPYIVTGLLAETTILWQPS 408          
BLAST of EY756124 vs. ExPASy Swiss-Prot
Match: GLNA2_HORVU (Glutamine synthetase leaf isozyme, chloroplastic OS=Hordeum vulgare PE=2 SV=2)

HSP 1 Score: 366.311 bits (939), Expect = 1.267e-100
Identity = 171/196 (87.24%), Postives = 183/196 (93.37%), Query Frame = 2
Query:   11 GADNSFGRDIADAHYKACLYAGINISGTNGEVMPGQWEYQVGPSVGIDAGDHIWCSRYLLERITEQAGVVLSLDPKPIEGDWNGAGCHTNYSTKSTREEGGYETIKKAILNLSLRHKEHISAYGEGNERRLTGKHETASIDSFSWGVANRGCSIRVGRETEKQGKGYLEDRRPASNMDPYVVTSLLAETTILWEPT 598
            G+D SFGRDI+DAHYKACLYAGI ISGTNGEVMPGQWEYQVGPSVGIDAGDHIW SRY+LERITEQAGVVL+LDPKPI+GDWNGAGCHTNYST S RE+GG++ IKKAILNLSLRH  HI+AYGEGNERRLTG HETASI  FSWGVANRGCSIRVGR+TE +GKGYLEDRRPASNMDPY VT+LLAETTILWEPT
Sbjct:  224 GSDKSFGRDISDAHYKACLYAGIEISGTNGEVMPGQWEYQVGPSVGIDAGDHIWASRYILERITEQAGVVLTLDPKPIQGDWNGAGCHTNYSTLSMREDGGFDVIKKAILNLSLRHDLHIAAYGEGNERRLTGLHETASISDFSWGVANRGCSIRVGRDTEAKGKGYLEDRRPASNMDPYTVTALLAETTILWEPT 419          
BLAST of EY756124 vs. ExPASy Swiss-Prot
Match: GLNA_PINSY (Glutamine synthetase cytosolic isozyme OS=Pinus sylvestris PE=2 SV=1)

HSP 1 Score: 349.747 bits (896), Expect = 1.227e-95
Identity = 157/195 (80.51%), Postives = 180/195 (92.31%), Query Frame = 2
Query:   11 GADNSFGRDIADAHYKACLYAGINISGTNGEVMPGQWEYQVGPSVGIDAGDHIWCSRYLLERITEQAGVVLSLDPKPIEGDWNGAGCHTNYSTKSTREEGGYETIKKAILNLSLRHKEHISAYGEGNERRLTGKHETASIDSFSWGVANRGCSIRVGRETEKQGKGYLEDRRPASNMDPYVVTSLLAETTILWEP 595
            GAD ++GRDI DAHYKACLY+GINISG NGEVMPGQWE+QVGPSVGI A D +WC+R+++ERITE+AGVVLS DPKPIEGDWNGAGCHTNYSTKS R+EGG+E IKKAI  L LRHKEHISAYGEGNERRLTG+HETA +++FSWGVANRG S+RVGR+TEK+GKGY EDRRPASNMDPY+VTS++AETTILW+P
Sbjct:  163 GADKAWGRDIVDAHYKACLYSGINISGINGEVMPGQWEFQVGPSVGISAADELWCARFIMERITEKAGVVLSFDPKPIEGDWNGAGCHTNYSTKSMRKEGGFEVIKKAIEKLKLRHKEHISAYGEGNERRLTGRHETADMNTFSWGVANRGASVRVGRDTEKEGKGYFEDRRPASNMDPYIVTSMIAETTILWKP 357          
The following BLAST results are available for this feature:
BLAST of EY756124 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 88
Match NameE-valueIdentityDescription
GLNA2_DAUCA1.825e-10792.35Glutamine synthetase, chloroplastic OS=Daucus caro... [more]
GLNA2_ARATH1.545e-10691.33Glutamine synthetase, chloroplastic/mitochondrial ... [more]
GLNA4_PHAVU2.635e-10691.84Glutamine synthetase leaf isozyme, chloroplastic O... [more]
GLNAC_BRANA5.871e-10690.31Glutamine synthetase, chloroplastic OS=Brassica na... [more]
GLNA2_MEDSA8.477e-10590.31Glutamine synthetase leaf isozyme, chloroplastic O... [more]
GLNA2_PEA2.467e-10489.80Glutamine synthetase leaf isozyme, chloroplastic O... [more]
GLNA2_ORYSJ1.599e-10389.80Glutamine synthetase, chloroplastic OS=Oryza sativ... [more]
GLNAC_MAIZE5.143e-10287.76Glutamine synthetase, chloroplastic OS=Zea mays GN... [more]
GLNA2_HORVU1.267e-10087.24Glutamine synthetase leaf isozyme, chloroplastic O... [more]
GLNA_PINSY1.227e-9580.51Glutamine synthetase cytosolic isozyme OS=Pinus sy... [more]

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Properties
Property NameValue
Genbank descriptionCS13-C1-001-003-H07-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY756124 ID=EY756124; Name=EY756124; organism=Citrus sinensis; type=EST; length=875bp
CCCGCGTCCGGGGGCTGATAACTCGTTTGGCCGTGACATTGCAGATGCTC
ATTACAAGGCTTGCTTGTATGCTGGCATTAACATTAGTGGCACCAACGGG
GAGGTTATGCCTGGCCAGTGGGAATATCAAGTTGGTCCCAGTGTAGGCAT
TGATGCTGGAGATCATATATGGTGTTCGAGATACCTTCTTGAGAGAATCA
CTGAACAAGCTGGTGTTGTTCTCTCACTTGATCCAAAACCAATTGAGGGA
GACTGGAATGGTGCTGGATGCCACACCAATTACAGTACAAAGAGTACGAG
AGAGGAAGGAGGCTATGAAACTATTAAGAAGGCAATCTTGAATCTGTCCC
TTCGCCATAAAGAACACATCAGTGCTTATGGTGAAGGAAATGAGAGAAGG
CTAACAGGAAAGCATGAAACAGCTAGCATTGACTCATTTTCTTGGGGTGT
GGCAAATCGTGGTTGCTCAATCCGTGTGGGACGTGAAACTGAGAAGCAAG
GCAAAGGTTACTTGGAAGATAGGCGTCCAGCTTCAAACATGGACCCTTAT
GTAGTGACCTCGTTACTGGCTGAAACTACAATATTGTGGGAACCCACACT
TGAGGCTGAAGCGCTAGCTGCTCAGAAGTTGGCATTGAATGTCTGAAGTT
GATTATAGATCAACTGAAGAACTTGAGAAGCAGTCTCTTGGATTTAAATG
CCCGTGCTTTGGGGAAATACTTTCCCTTTCCTTTTTANGTCTTTTAGAAA
GNACCTTGTAAATAAAAGGTCCGAAAGTTATGGTCATGCCAAGTTTATCG
ATCCTCAGATTGAGATATATCCTCAGATCGATCAGTCATAGNTGGTTCAA
GTTTACCCATGTTTAAATGGATGCT
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