EY756123
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of EY756123 vs. ExPASy Swiss-Prot
Match: DCAF8_RAT (DDB1- and CUL4-associated factor 8 OS=Rattus norvegicus GN=Dcaf8 PE=2 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 1.211e-16 Identity = 36/60 (60.00%), Postives = 48/60 (80.00%), Query Frame = 1 Query: 112 YSGHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKLVRLMVGDR-HVVNQLEPH 288 Y GHRN+ TVKGVNF+GP E+V+SGSDCGH+F+W+K ++++ M GD+ VVN LEPH Sbjct: 422 YKGHRNNATVKGVNFYGPKSEFVVSGSDCGHIFLWEKSSCQIIQFMEGDKGGVVNCLEPH 481
BLAST of EY756123 vs. ExPASy Swiss-Prot
Match: DCAF8_PONAB (DDB1- and CUL4-associated factor 8 OS=Pongo abelii GN=DCAF8 PE=2 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 1.211e-16 Identity = 36/60 (60.00%), Postives = 48/60 (80.00%), Query Frame = 1 Query: 112 YSGHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKLVRLMVGDR-HVVNQLEPH 288 Y GHRN+ TVKGVNF+GP E+V+SGSDCGH+F+W+K ++++ M GD+ VVN LEPH Sbjct: 428 YKGHRNNATVKGVNFYGPKSEFVVSGSDCGHIFLWEKSSCQIIQFMEGDKGGVVNCLEPH 487
BLAST of EY756123 vs. ExPASy Swiss-Prot
Match: DCAF8_MOUSE (DDB1- and CUL4-associated factor 8 OS=Mus musculus GN=Dcaf8 PE=1 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 1.211e-16 Identity = 36/60 (60.00%), Postives = 48/60 (80.00%), Query Frame = 1 Query: 112 YSGHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKLVRLMVGDR-HVVNQLEPH 288 Y GHRN+ TVKGVNF+GP E+V+SGSDCGH+F+W+K ++++ M GD+ VVN LEPH Sbjct: 422 YKGHRNNATVKGVNFYGPKSEFVVSGSDCGHIFLWEKSSCQIIQFMEGDKGGVVNCLEPH 481
BLAST of EY756123 vs. ExPASy Swiss-Prot
Match: DCAF8_HUMAN (DDB1- and CUL4-associated factor 8 OS=Homo sapiens GN=DCAF8 PE=1 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 1.211e-16 Identity = 36/60 (60.00%), Postives = 48/60 (80.00%), Query Frame = 1 Query: 112 YSGHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKLVRLMVGDR-HVVNQLEPH 288 Y GHRN+ TVKGVNF+GP E+V+SGSDCGH+F+W+K ++++ M GD+ VVN LEPH Sbjct: 428 YKGHRNNATVKGVNFYGPKSEFVVSGSDCGHIFLWEKSSCQIIQFMEGDKGGVVNCLEPH 487
BLAST of EY756123 vs. ExPASy Swiss-Prot
Match: DC8L1_XENTR (DDB1- and CUL4-associated factor 8-like protein 1 OS=Xenopus tropicalis GN=dcaf8l1 PE=2 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 1.211e-16 Identity = 37/60 (61.67%), Postives = 48/60 (80.00%), Query Frame = 1 Query: 112 YSGHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKLVRLMVGDR-HVVNQLEPH 288 Y GHRN+ TVKGVNF+GP E+V+SGSDCGH+F+W+K ++V+ M GD+ VVN LEPH Sbjct: 434 YKGHRNNATVKGVNFYGPRSEFVVSGSDCGHIFLWEKSSCQIVQFMDGDKGGVVNCLEPH 493
BLAST of EY756123 vs. ExPASy Swiss-Prot
Match: DC8L1_XENLA (DDB1- and CUL4-associated factor 8-like protein 1 OS=Xenopus laevis GN=dcaf8l1 PE=2 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 1.211e-16 Identity = 37/60 (61.67%), Postives = 48/60 (80.00%), Query Frame = 1 Query: 112 YSGHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKLVRLMVGDR-HVVNQLEPH 288 Y GHRN+ TVKGVNF+GP E+V+SGSDCGH+F+W+K ++V+ M GD+ VVN LEPH Sbjct: 431 YKGHRNNATVKGVNFYGPRSEFVVSGSDCGHIFLWEKSSCQIVQFMDGDKGGVVNCLEPH 490
BLAST of EY756123 vs. ExPASy Swiss-Prot
Match: DC8L1_HUMAN (DDB1- and CUL4-associated factor 8-like protein 1 OS=Homo sapiens GN=DCAF8L1 PE=2 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 6.011e-16 Identity = 34/60 (56.67%), Postives = 46/60 (76.67%), Query Frame = 1 Query: 112 YSGHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKLVRLMVGDR-HVVNQLEPH 288 Y GHRN+ T+K VNF+GP E+V+SGSDCGH+F W+K ++++ M GDR +VN LEPH Sbjct: 431 YKGHRNNDTIKCVNFYGPRSEFVVSGSDCGHVFFWEKSSSQIIQFMEGDRGDIVNCLEPH 490
BLAST of EY756123 vs. ExPASy Swiss-Prot
Match: DC8L2_HUMAN (DDB1- and CUL4-associated factor 8-like protein 2 OS=Homo sapiens GN=DCAF8L2 PE=2 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 6.646e-15 Identity = 32/60 (53.33%), Postives = 45/60 (75.00%), Query Frame = 1 Query: 112 YSGHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKLVRLMVGDRH-VVNQLEPH 288 + GHRN+ TVKGVNF+GP E+V+SGSDCGH+F W+K ++++ + G R +N LEPH Sbjct: 434 FKGHRNNTTVKGVNFYGPRSEFVVSGSDCGHIFFWEKSSCQIIQFLKGSREGTINCLEPH 493
BLAST of EY756123 vs. ExPASy Swiss-Prot
Match: YBU3_SCHPO (Uncharacterized WD repeat-containing protein C609.03 OS=Schizosaccharomyces pombe GN=SPBC609.03 PE=2 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 8.124e-13 Identity = 39/87 (44.83%), Postives = 51/87 (58.62%), Query Frame = 1 Query: 52 GPSPLSLSPEDLQKREEPQV--------YSGHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKLVRLMVGDRHVVNQLEPH 288 GP+ LSL + +K EP V Y GH N +++K VNF+G NDEYVMSGSD G FIW K ++ ++ GD VN +E H Sbjct: 637 GPTLLSLRMKK-RKAVEPNVPVNTHVKSYYGHCNVESIKNVNFYGQNDEYVMSGSDDGRFFIWDKLNASILAIIHGDSEAVNVIEGH 722
BLAST of EY756123 vs. ExPASy Swiss-Prot
Match: DCAF6_PONAB (DDB1- and CUL4-associated factor 6 OS=Pongo abelii GN=DCAF6 PE=2 SV=2) HSP 1 Score: 72.0182 bits (175), Expect = 1.061e-12 Identity = 34/61 (55.74%), Postives = 44/61 (72.13%), Query Frame = 1 Query: 109 VYSGHRNSQT-VKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKLVRLMVGDRHVVNQLEPH 288 VY GHRNS+T +K NF+G N +VMSGSDCGH+FIW + + + L+ D HVVN L+PH Sbjct: 712 VYKGHRNSRTMIKEANFWGAN--FVMSGSDCGHIFIWDRHTAEHLMLLEADNHVVNCLQPH 770 The following BLAST results are available for this feature:
BLAST of EY756123 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 14
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Sequences
The
following sequences are available for this feature:
EST sequence >EY756123 ID=EY756123; Name=EY756123; organism=Citrus sinensis; type=EST; length=375bpback to top |