EY756116

Overview
NameEY756116
Unique NameEY756116
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length560
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig13306 contig Csv1_Contig13306:1..560. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY756116 vs. ExPASy Swiss-Prot
Match: MCFB_DICDI (Mitochondrial substrate carrier family protein B OS=Dictyostelium discoideum GN=mcfB PE=3 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 8.628e-17
Identity = 41/90 (45.56%), Postives = 59/90 (65.56%), Query Frame = 2
Query:   35 VLVSLACGSLSGIASSTATFPLDLVRRRKQLEGAGGRARVYTTGLFGTFQYIFRTEGFRGLYRGILPEYYKVVPGVGICFMTYETLKMLL 304
            V+ SL  G++SG  + T T+P+DL+RRR Q++G GG+  +Y  G F  F+ I R EG  GLY G++P Y KV+P + I F  YE +K +L
Sbjct:  335 VVQSLTFGAISGATAQTLTYPIDLIRRRLQVQGIGGKDILYN-GTFDAFRKIIRDEGVLGLYNGMIPCYLKVIPAISISFCVYEVMKKIL 423          
BLAST of EY756116 vs. ExPASy Swiss-Prot
Match: CMC3_CAEEL (Probable calcium-binding mitochondrial carrier F17E5.2 OS=Caenorhabditis elegans GN=F17E5.2 PE=2 SV=4)

HSP 1 Score: 78.1814 bits (191), Expect = 3.069e-14
Identity = 38/95 (40.00%), Postives = 53/95 (55.79%), Query Frame = 2
Query:   20 HNDSPVLVSLACGSLSGIASSTATFPLDLVRRRKQLEGAGGRARVYTTGLFGTFQYIFRTEGFRGLYRGILPEYYKVVPGVGICFMTYETLKMLL 304
            H +  VL  LACG+ S      A++PL LVR R Q      +       + G F++I +TEGF GLYRGI P + KV+P V I ++ YE ++  L
Sbjct:  432 HTEPGVLALLACGTCSSTCGQLASYPLALVRTRLQARAISPKNSTQPDTMVGQFKHILQTEGFTGLYRGITPNFMKVIPAVSISYVVYEKVRKQL 526          
BLAST of EY756116 vs. ExPASy Swiss-Prot
Match: SCM2B_DANRE (Calcium-binding mitochondrial carrier protein SCaMC-2-B OS=Danio rerio GN=slc25a25b PE=3 SV=2)

HSP 1 Score: 75.8702 bits (185), Expect = 1.523e-13
Identity = 40/93 (43.01%), Postives = 56/93 (60.22%), Query Frame = 2
Query:   26 DSPVLVSLACGSLSGIASSTATFPLDLVRRRKQLEGAGGRARVYTTGLFGTFQYIFRTEGFRGLYRGILPEYYKVVPGVGICFMTYETLKMLL 304
            D  V V LACG++S      A++PL LVR R Q + +   +   T  + G F++I RTEG  GLYRG+ P + KV+P V I ++ YE LK+ L
Sbjct:  374 DPGVFVLLACGTMSSTCGQLASYPLALVRTRMQAQASQEGSPQMT--MSGLFRHIVRTEGAIGLYRGLAPNFMKVIPAVSISYVVYENLKITL 464          
BLAST of EY756116 vs. ExPASy Swiss-Prot
Match: CMC3_CAEBR (Probable calcium-binding mitochondrial carrier CBG00135 OS=Caenorhabditis briggsae GN=CBG00135 PE=3 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 1.523e-13
Identity = 37/95 (38.95%), Postives = 52/95 (54.74%), Query Frame = 2
Query:   20 HNDSPVLVSLACGSLSGIASSTATFPLDLVRRRKQLEGAGGRARVYTTGLFGTFQYIFRTEGFRGLYRGILPEYYKVVPGVGICFMTYETLKMLL 304
            H +  VL  LACG+ S      A++PL LVR R Q      +       + G F++I + EGF GLYRGI P + KV+P V I ++ YE ++  L
Sbjct:  433 HTEPGVLALLACGTCSSTCGQLASYPLALVRTRLQARAISPKNSSQPDTMIGQFKHILQNEGFTGLYRGITPNFMKVIPAVSISYVVYEKVRKQL 527          
BLAST of EY756116 vs. ExPASy Swiss-Prot
Match: SCMC2_HUMAN (Calcium-binding mitochondrial carrier protein SCaMC-2 OS=Homo sapiens GN=SLC25A25 PE=1 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 4.431e-13
Identity = 40/93 (43.01%), Postives = 55/93 (59.14%), Query Frame = 2
Query:   26 DSPVLVSLACGSLSGIASSTATFPLDLVRRRKQLEGAGGRARVYTTGLFGTFQYIFRTEGFRGLYRGILPEYYKVVPGVGICFMTYETLKMLL 304
            D  V V LACG++S      A++PL LVR R Q + +   A   T  +   F++I RTEG  GLYRG+ P + KV+P V I ++ YE LK+ L
Sbjct:  374 DPGVFVLLACGTMSSTCGQLASYPLALVRTRMQAQASIEGAPEVT--MSSLFKHILRTEGAFGLYRGLAPNFMKVIPAVSISYVVYENLKITL 464          
BLAST of EY756116 vs. ExPASy Swiss-Prot
Match: SCMC3_HUMAN (Calcium-binding mitochondrial carrier protein SCaMC-3 OS=Homo sapiens GN=SLC25A23 PE=1 SV=2)

HSP 1 Score: 73.9442 bits (180), Expect = 5.787e-13
Identity = 39/95 (41.05%), Postives = 54/95 (56.84%), Query Frame = 2
Query:   26 DSPVLVSLACGSLSGIASSTATFPLDLVRRRKQLEGA--GGRARVYTTGLFGTFQYIFRTEGFRGLYRGILPEYYKVVPGVGICFMTYETLKMLL 304
            D  +LV LACG++S      A++PL LVR R Q + +  GG        + G  ++I   EG RGLYRGI P + KV+P V I ++ YE +K  L
Sbjct:  373 DPGILVLLACGTISSTCGQIASYPLALVRTRMQAQASIEGGPQ----LSMLGLLRHILSQEGMRGLYRGIAPNFMKVIPAVSISYVVYENMKQAL 463          
BLAST of EY756116 vs. ExPASy Swiss-Prot
Match: SCMC2_XENTR (Calcium-binding mitochondrial carrier protein SCaMC-2 OS=Xenopus tropicalis GN=slc25a25 PE=2 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 5.787e-13
Identity = 40/93 (43.01%), Postives = 54/93 (58.06%), Query Frame = 2
Query:   26 DSPVLVSLACGSLSGIASSTATFPLDLVRRRKQLEGAGGRARVYTTGLFGTFQYIFRTEGFRGLYRGILPEYYKVVPGVGICFMTYETLKMLL 304
            D  V V LACG++S      A++PL LVR R Q E +   A   T      F++I +TEG  GLYRG+ P + KV+P V I ++ YE LK+ L
Sbjct:  418 DPGVFVLLACGTISSTCGQLASYPLALVRTRMQAEASVEGAPQMTMSKL--FKHIVKTEGAFGLYRGLAPNFMKVIPAVSISYVVYENLKLTL 508          
BLAST of EY756116 vs. ExPASy Swiss-Prot
Match: SCM2A_DANRE (Calcium-binding mitochondrial carrier protein SCaMC-2-A OS=Danio rerio GN=slc25a25a PE=2 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 5.787e-13
Identity = 40/94 (42.55%), Postives = 57/94 (60.64%), Query Frame = 2
Query:   26 DSPVLVSLACGSLSGIASSTATFPLDLVRRRKQLEGA-GGRARVYTTGLFGTFQYIFRTEGFRGLYRGILPEYYKVVPGVGICFMTYETLKMLL 304
            D  V V LACG++S      A++PL L+R R Q + +  G ++V  TGLF   + I +TEG  GLYRG+ P + KV+P V I ++ YE +K  L
Sbjct:  374 DPGVFVLLACGTVSSTCGQLASYPLALIRTRMQAQASVEGSSQVSMTGLF---KQIMKTEGPTGLYRGLTPNFLKVIPAVSISYVVYEHIKSTL 464          
BLAST of EY756116 vs. ExPASy Swiss-Prot
Match: MCFV_DICDI (Mitochondrial substrate carrier family protein V OS=Dictyostelium discoideum GN=mcfV PE=3 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 5.787e-13
Identity = 37/89 (41.57%), Postives = 50/89 (56.18%), Query Frame = 2
Query:   35 VLVSLACGSLSGIASSTATFPLDLVRRRKQLEGAGGRARVYTTGLFGTFQYIFRTEGFRGLYRGILPEYYKVVPGVGICFMTYETLKML 301
            ++    CG+LSG  + T  +PLD++RRR  ++G GG   +Y  G   T + I   EG    Y GI+P Y+KVVP V I F  YE  K L
Sbjct:  432 MICDFVCGALSGAVTMTVCYPLDVLRRRMMIQGIGGNKVLYKNGWDAT-KKILSNEGLVAFYHGIIPAYFKVVPTVAISFAVYEICKDL 519          
BLAST of EY756116 vs. ExPASy Swiss-Prot
Match: SCMC2_XENLA (Calcium-binding mitochondrial carrier protein SCaMC-2 OS=Xenopus laevis GN=slc25a25 PE=2 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 7.558e-13
Identity = 40/93 (43.01%), Postives = 54/93 (58.06%), Query Frame = 2
Query:   26 DSPVLVSLACGSLSGIASSTATFPLDLVRRRKQLEGAGGRARVYTTGLFGTFQYIFRTEGFRGLYRGILPEYYKVVPGVGICFMTYETLKMLL 304
            D  V V LACG++S      A++PL LVR R Q E +   A   T      F++I +TEG  GLYRG+ P + KV+P V I ++ YE LK+ L
Sbjct:  419 DPGVFVLLACGTVSSTCGQLASYPLALVRTRMQAEASVEGAPQMTMSKL--FKHIVKTEGAFGLYRGLAPNFMKVIPAVSISYVVYENLKLTL 509          
The following BLAST results are available for this feature:
BLAST of EY756116 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 26
Match NameE-valueIdentityDescription
MCFB_DICDI8.628e-1745.56Mitochondrial substrate carrier family protein B O... [more]
CMC3_CAEEL3.069e-1440.00Probable calcium-binding mitochondrial carrier F17... [more]
SCM2B_DANRE1.523e-1343.01Calcium-binding mitochondrial carrier protein SCaM... [more]
CMC3_CAEBR1.523e-1338.95Probable calcium-binding mitochondrial carrier CBG... [more]
SCMC2_HUMAN4.431e-1343.01Calcium-binding mitochondrial carrier protein SCaM... [more]
SCMC3_HUMAN5.787e-1341.05Calcium-binding mitochondrial carrier protein SCaM... [more]
SCMC2_XENTR5.787e-1343.01Calcium-binding mitochondrial carrier protein SCaM... [more]
SCM2A_DANRE5.787e-1342.55Calcium-binding mitochondrial carrier protein SCaM... [more]
MCFV_DICDI5.787e-1341.57Mitochondrial substrate carrier family protein V O... [more]
SCMC2_XENLA7.558e-1343.01Calcium-binding mitochondrial carrier protein SCaM... [more]

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Properties
Property NameValue
Genbank descriptionCS13-C1-001-003-G09-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY756116 ID=EY756116; Name=EY756116; organism=Citrus sinensis; type=EST; length=560bp
CCACGCGTCCGCACGAAGGCACAATGATTCCCCCGTCCTGGTCAGTCTGG
CATGTGGCAGTCTTTCAGGCATTGCATCATCAACAGCAACATTTCCTCTG
GATTTGGTGAGGCGAAGAAAGCAACTCGAAGGGGCGGGTGGCCGGGCCAG
GGTTTACACAACGGGTCTTTTTGGTACATTTCAGTACATATTCCGGACTG
AAGGCTTCCGTGGTCTGTACAGAGGAATTCTTCCTGAATATTACAAAGTG
GTTCCTGGAGTCGGTATTTGTTTCATGACATATGAAACACTGAAGATGCT
TTTAGCAGATATTTCTTCCTGACTATAGTCGCCATCAGCTCTGGACTTCA
CCGTCTACAATGGTAAGGATGAGGTGGTTAAGAGTTGTGATGTAATAGCA
TATAACCATTCATTTTGATCTGCTCTCTCATGGTGATTAATATGTGATTC
TTACGTGAGAATTATATTTTTTTCGTGTATAAATTAGTGAAACGTAAATC
ACAGTTTCAAGTGTACTTATCATAGTTATTCACATTTCTCAATAACATCA
GTTTGACCAG
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