EY756079

Overview
NameEY756079
Unique NameEY756079
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length392
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig7948 contig Csv1_Contig7948:181..573. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
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BLAST of EY756079 vs. ExPASy Swiss-Prot
Match: U497L_ARATH (UPF0497 membrane protein At3g53850 OS=Arabidopsis thaliana GN=At3g53850 PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 1.963e-11
Identity = 30/51 (58.82%), Postives = 39/51 (76.47%), Query Frame = 3 
Query:   36 VVVLYAKDLNFCMPQNNLACHSFEVSVILAFITWLLIALSSHVMFWILASV 188
            VVVLY KD+ +C  Q+   C  +EV+V L+F+TW+ IA+SSHV FWILASV
Sbjct:  104 VVVLYEKDIKYCNTQSQYPCLRYEVAVALSFVTWIQIAVSSHVTFWILASV 154
The following BLAST results are available for this feature:
BLAST of EY756079 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
U497L_ARATH1.963e-1158.82UPF0497 membrane protein At3g53850 OS=Arabidopsis ... [more]
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Properties
Property NameValue
Genbank descriptionCS13-C1-001-003-D02-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY756079 ID=EY756079; Name=EY756079; organism=Citrus sinensis; type=EST; length=392bp
TGCGTAGACCCACGCGTCCGGCTCCTCAGTTGCGCGTTGTAGTTCTTTAT
GCAAAAGATTTGAATTTTTGCATGCCTCAAAATAATCTTGCATGCCACAG
CTTTGAGGTTTCAGTAATTTTAGCATTCATCACCTGGCTTCTGATTGCCC
TGTCATCTCATGTGATGTTTTGGATCTTAGCCTCAGTTTAGACAACTCAG
AGCTCTTGCTGCCCCCTAATCAACATATATATACTCTATCTTTTGTTTGA
CATGTAAATGCTTCCTTTACTATCTGGCCATAATGTACCGAAATTTTTTG
GGCAATTTTTAGAACTTTCTCTGTTGATTTACTAACTTTTGTCAAANNNN
AAAAAAAAAAANNAAAAAAAAAAAAAAAAAAAAAAAAAAAAG
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