EY756071

Overview
NameEY756071
Unique NameEY756071
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length395
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig9675 contig Csv1_Contig9675:405..798. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY756071 vs. ExPASy Swiss-Prot
Match: ELI_PEA (Early light-induced protein, chloroplastic OS=Pisum sativum PE=2 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 1.219e-29
Identity = 65/86 (75.58%), Postives = 74/86 (86.05%), Query Frame = 2
Query:   11 VAALRVEISKGQDVFAQLSDGGVAWFLGTSVLLTVASLVPLFKGVSVESKSDGFMTSDAELWNGRFAMLGLVALAFTEFVKGGTLV 268
            VAA+ VEI+KGQ +  QLS GGVAWFLGTSVLL++ASL+P F+GVSVESKS   M+SDAE WNGR AMLGLVALAFTEFVKG +LV
Sbjct:  111 VAAMGVEIAKGQGLSEQLSGGGVAWFLGTSVLLSLASLIPFFQGVSVESKSKSIMSSDAEFWNGRIAMLGLVALAFTEFVKGTSLV 196          
BLAST of EY756071 vs. ExPASy Swiss-Prot
Match: DS22_CRAPL (Desiccation stress protein DSP-22, chloroplastic OS=Craterostigma plantagineum GN=DSP-22 PE=2 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 1.261e-26
Identity = 53/86 (61.63%), Postives = 75/86 (87.21%), Query Frame = 2
Query:   11 VAALRVEISKGQDVFAQLSDGGVAWFLGTSVLLTVASLVPLFKGVSVESKSDGFMTSDAELWNGRFAMLGLVALAFTEFVKGGTLV 268
            VAA+ VE++ G+DVF+Q+ +GGV WFL TS +L +A+L+P+++G+S E+K++GF  SDAE+WNGRFAM+GLVALAFTE+VKGG L+
Sbjct:  112 VAAVGVELATGRDVFSQVFNGGVMWFLLTSAVLVLATLIPIYRGLSPEAKNNGFWNSDAEIWNGRFAMIGLVALAFTEYVKGGPLI 197          
BLAST of EY756071 vs. ExPASy Swiss-Prot
Match: ELI5_HORVU (High molecular mass early light-inducible protein HV58, chloroplastic OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 2.304e-20
Identity = 51/88 (57.95%), Postives = 64/88 (72.73%), Query Frame = 2
Query:   11 VAALRVEISKGQDVFAQLS--DGGVAWFLGTSVLLTVASLVPLFKGVSVESKSDGFMTSDAELWNGRFAMLGLVALAFTEFVKGGTLV 268
            VAAL VE ++G  +  Q+     G+AWFL T+ + +VASL+PL +G SVESKS G  ++DAELWNGRFAMLGLVALA TEF+ G   V
Sbjct:  142 VAALSVEAARGGGLLDQVGMWSSGLAWFLATAGVFSVASLLPLLQGQSVESKSSGIWSADAELWNGRFAMLGLVALAATEFITGAPFV 229          
BLAST of EY756071 vs. ExPASy Swiss-Prot
Match: ELI9_HORVU (Low molecular mass early light-inducible protein HV90, chloroplastic OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 1.826e-17
Identity = 45/87 (51.72%), Postives = 58/87 (66.67%), Query Frame = 2
Query:   11 VAALRVEISKGQDVFAQLSDG-GVAWFLGTSVLLTVASLVPLFKGVSVESKSDGFMTSDAELWNGRFAMLGLVALAFTEFVKGGTLV 268
            V AL VE  +G  + +QL  G G AWF  T  +L++ASLVPL +G S E ++   M ++AELWNGRFAMLGLVALA TE + G   +
Sbjct:   84 VTALAVEAGRGDGLLSQLGSGTGQAWFAYTVAVLSMASLVPLLQGESAEGRAGAIMNANAELWNGRFAMLGLVALAATEIITGAPFI 170          
BLAST of EY756071 vs. ExPASy Swiss-Prot
Match: ELI6_HORVU (Low molecular mass early light-inducible protein HV60, chloroplastic OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 4.067e-17
Identity = 44/83 (53.01%), Postives = 57/83 (68.67%), Query Frame = 2
Query:   11 VAALRVEISKGQDVFAQLSDG-GVAWFLGTSVLLTVASLVPLFKGVSVESKSDGFMTSDAELWNGRFAMLGLVALAFTEFVKG 256
            V AL VE  +G  + +QL  G G AWF  T  +L++ASLVPL +G S E ++   M ++AELWNGRFAM+GLVALA TE + G
Sbjct:   79 VTALAVEAGRGDGLLSQLGSGTGQAWFAYTVAMLSMASLVPLLQGESAEGRAGAIMNANAELWNGRFAMIGLVALAATEIITG 161          
The following BLAST results are available for this feature:
BLAST of EY756071 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 5
Match NameE-valueIdentityDescription
ELI_PEA1.219e-2975.58Early light-induced protein, chloroplastic OS=Pisu... [more]
DS22_CRAPL1.261e-2661.63Desiccation stress protein DSP-22, chloroplastic O... [more]
ELI5_HORVU2.304e-2057.95High molecular mass early light-inducible protein ... [more]
ELI9_HORVU1.826e-1751.72Low molecular mass early light-inducible protein H... [more]
ELI6_HORVU4.067e-1753.01Low molecular mass early light-inducible protein H... [more]
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Properties
Property NameValue
Genbank descriptionCS13-C1-001-003-C05-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY756071 ID=EY756071; Name=EY756071; organism=Citrus sinensis; type=EST; length=395bp
CCACGCGTCCGTGGCTGCATTGCGGGTGGAGATATCCAAGGGTCAGGATG
TGTTTGCCCAGTTATCAGACGGTGGGGTTGCCTGGTTCTTGGGGACCAGT
GTTTTGCTCACGGTTGCGTCCCTGGTTCCTTTGTTTAAAGGTGTCAGCGT
GGAGTCTAAATCGGATGGGTTCATGACTTCGGATGCTGAGTTGTGGAATG
GGAGGTTTGCTATGCTGGGCCTTGTTGCTTTGGCTTTCACCGAGTTTGTT
AAGGGTGGCACCCTTGTTTAAGCTTAATTTTGTTTAGATCTGTAGATCTG
TATTTTTTTTTAACTAATTAATGTATGAGATCCTACTGTAATTAAATCTC
TATTTCTCAAAAANNAAAAAAAAAAAAAAAAAAAAAAAAAAAAAG
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