EY756069

Overview
NameEY756069
Unique NameEY756069
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length663
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EY756069 vs. ExPASy Swiss-Prot
Match: CB22_CUCSA (Chlorophyll a-b binding protein of LHCII type 1 (Fragment) OS=Cucumis sativus PE=2 SV=1)

HSP 1 Score: 213.772 bits (543), Expect = 6.507e-55
Identity = 101/104 (97.12%), Postives = 104/104 (100.00%), Query Frame = 2 
Query:   14 ACQLVLMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 325
            ACQ+VLMGAVEGYRIAGGPLGEVTDP+YPGGSFDPLGLADDPEAFAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK
Sbjct:  103 ACQVVLMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 206
[Close]
BLAST of EY756069 vs. ExPASy Swiss-Prot
Match: CB21_CUCSA (Chlorophyll a-b binding protein of LHCII type I, chloroplastic (Fragment) OS=Cucumis sativus PE=2 SV=1)

HSP 1 Score: 213.772 bits (543), Expect = 6.507e-55
Identity = 101/104 (97.12%), Postives = 104/104 (100.00%), Query Frame = 2 
Query:   14 ACQLVLMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 325
            ACQ+VLMGAVEGYRIAGGPLGEVTDP+YPGGSFDPLGLADDPEAFAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK
Sbjct:  152 ACQVVLMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 255
[Close]
BLAST of EY756069 vs. ExPASy Swiss-Prot
Match: CB2G_SOLLC (Chlorophyll a-b binding protein 3C, chloroplastic OS=Solanum lycopersicum GN=CAB3C PE=3 SV=1)

HSP 1 Score: 211.846 bits (538), Expect = 2.473e-54
Identity = 101/104 (97.12%), Postives = 103/104 (99.04%), Query Frame = 2 
Query:   14 ACQLVLMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 325
            ACQ+VLMGAVEGYRIAGGPLGEV DPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWA+ATNFVPGK
Sbjct:  164 ACQVVLMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAFATNFVPGK 267
[Close]
BLAST of EY756069 vs. ExPASy Swiss-Prot
Match: CB2B_PINSY (Chlorophyll a-b binding protein type 2 member 1B, chloroplastic OS=Pinus sylvestris PE=2 SV=1)

HSP 1 Score: 211.846 bits (538), Expect = 2.473e-54
Identity = 99/104 (95.19%), Postives = 104/104 (100.00%), Query Frame = 2 
Query:   14 ACQLVLMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 325
            ACQ++LMGAVEGYRIAGGPLGEVTDP+YPGGSFDPLGLA+DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP+ENLADHLADPVNNNAWAYATNFVPGK
Sbjct:  171 ACQVILMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLADHLADPVNNNAWAYATNFVPGK 274
[Close]
BLAST of EY756069 vs. ExPASy Swiss-Prot
Match: CB27_TOBAC (Chlorophyll a-b binding protein 7, chloroplastic OS=Nicotiana tabacum GN=CAB7 PE=3 SV=1)

HSP 1 Score: 211.846 bits (538), Expect = 2.473e-54
Identity = 99/104 (95.19%), Postives = 103/104 (99.04%), Query Frame = 2 
Query:   14 ACQLVLMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 325
            ACQ+VLMGA+EGYR+AGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPL+NL DHLADPVNNNAWAYATNFVPGK
Sbjct:  164 ACQVVLMGAIEGYRVAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLDNLVDHLADPVNNNAWAYATNFVPGK 267
[Close]
BLAST of EY756069 vs. ExPASy Swiss-Prot
Match: CB25_PETSP (Chlorophyll a-b binding protein 91R, chloroplastic OS=Petunia sp. GN=CAB91R PE=3 SV=1)

HSP 1 Score: 211.846 bits (538), Expect = 2.473e-54
Identity = 100/104 (96.15%), Postives = 103/104 (99.04%), Query Frame = 2 
Query:   14 ACQLVLMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 325
            ACQ+VLMGAVEGYR+AGGPLGEV DPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAW+YATNFVPGK
Sbjct:  164 ACQVVLMGAVEGYRVAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWSYATNFVPGK 267
[Close]
BLAST of EY756069 vs. ExPASy Swiss-Prot
Match: CB24_TOBAC (Chlorophyll a-b binding protein 40, chloroplastic OS=Nicotiana tabacum GN=CAB40 PE=2 SV=1)

HSP 1 Score: 211.46 bits (537), Expect = 3.229e-54
Identity = 100/104 (96.15%), Postives = 103/104 (99.04%), Query Frame = 2 
Query:   14 ACQLVLMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 325
            ACQ+VLMGAVEGYR+AGGPLGEV DPLYPGGSFDPLGLA+DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK
Sbjct:  164 ACQVVLMGAVEGYRVAGGPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 267
[Close]
BLAST of EY756069 vs. ExPASy Swiss-Prot
Match: CB24_PETSP (Chlorophyll a-b binding protein 25, chloroplastic OS=Petunia sp. GN=CAB25 PE=3 SV=1)

HSP 1 Score: 211.075 bits (536), Expect = 4.217e-54
Identity = 100/104 (96.15%), Postives = 103/104 (99.04%), Query Frame = 2 
Query:   14 ACQLVLMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 325
            ACQ+VLMGAVEGYR+AGGPLGEV DPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWA+ATNFVPGK
Sbjct:  163 ACQVVLMGAVEGYRVAGGPLGEVIDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAFATNFVPGK 266
[Close]
BLAST of EY756069 vs. ExPASy Swiss-Prot
Match: CB22_TOBAC (Chlorophyll a-b binding protein 21, chloroplastic OS=Nicotiana tabacum GN=CAB21 PE=2 SV=1)

HSP 1 Score: 211.075 bits (536), Expect = 4.217e-54
Identity = 99/104 (95.19%), Postives = 103/104 (99.04%), Query Frame = 2 
Query:   14 ACQLVLMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 325
            ACQ++LMGAVEGYR+AGGPLGEV DPLYPGGSFDPLGLA+DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK
Sbjct:  162 ACQVILMGAVEGYRVAGGPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 265
[Close]
BLAST of EY756069 vs. ExPASy Swiss-Prot
Match: CB2D_SOLLC (Chlorophyll a-b binding protein 1D (Fragment) OS=Solanum lycopersicum GN=CAB1D PE=3 SV=1)

HSP 1 Score: 210.69 bits (535), Expect = 5.508e-54
Identity = 100/104 (96.15%), Postives = 103/104 (99.04%), Query Frame = 2 
Query:   14 ACQLVLMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 325
            ACQ+VLMGAVEGYRIAGGPLGEV DPLYPGGSFDPLGLA+DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAW+YATNFVPGK
Sbjct:   13 ACQVVLMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWSYATNFVPGK 116
The following BLAST results are available for this feature:
BLAST of EY756069 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 78
Match NameE-valueIdentityDescription
CB22_CUCSA6.507e-5597.12Chlorophyll a-b binding protein of LHCII type 1 (F... [more]
CB21_CUCSA6.507e-5597.12Chlorophyll a-b binding protein of LHCII type I, c... [more]
CB2G_SOLLC2.473e-5497.12Chlorophyll a-b binding protein 3C, chloroplastic ... [more]
CB2B_PINSY2.473e-5495.19Chlorophyll a-b binding protein type 2 member 1B, ... [more]
CB27_TOBAC2.473e-5495.19Chlorophyll a-b binding protein 7, chloroplastic O... [more]
CB25_PETSP2.473e-5496.15Chlorophyll a-b binding protein 91R, chloroplastic... [more]
CB24_TOBAC3.229e-5496.15Chlorophyll a-b binding protein 40, chloroplastic ... [more]
CB24_PETSP4.217e-5496.15Chlorophyll a-b binding protein 25, chloroplastic ... [more]
CB22_TOBAC4.217e-5495.19Chlorophyll a-b binding protein 21, chloroplastic ... [more]
CB2D_SOLLC5.508e-5496.15Chlorophyll a-b binding protein 1D (Fragment) OS=S... [more]

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Properties
Property NameValue
Genbank descriptionCS13-C1-001-003-C03-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY756069 ID=EY756069; Name=EY756069; organism=Citrus sinensis; type=EST; length=663bp
CCACGCGTCCGGGGCTTGCCAGCTGGTCTTGATGGGAGCCGTTGAGGGTT
ACAGAATTGCTGGAGGGCCGCTCGGTGAAGTGACTGACCCATTGTACCCA
GGTGGCAGCTTTGATCCATTGGGTTTGGCTGATGACCCGGAGGCTTTTGC
TGAGCTCAAGGTTAAGGAAATCAAGAATGGAAGGTTGGCTATGTTCTCCA
TGTTTGGTTTCTTCGTTCAGGCCATTGTCACCGGCAAGGGACCGTTAGAG
AACTTGGCCGACCACTTGGCCGACCCTGTCAACAACAATGCCTGGGCCTA
CGCCACCAACTTTGTCCCCGGAAAGTGAGCTTCGGTTGATAACATTAGTA
GCGTGGAAATTGGAATTGAGAGTGATTGGTTATTGATGTGACTCTATTTC
AACTTGCAAAACATGTGAATTATGTAATGTACTGCTACTACCAGTTTGAG
GGGATTGTATTTTCATTCAATCTCTTGTCGCACGGTTCTAGTTCTAGTTC
CTCCTCCTTACAGGTTGTGCCAGAATCTAGTTACAAGTTTACGTCGAAAA
AAAAAAAAGGGAGGAGTGGTGAAGAAAAGATAGCAATGGAGAACAAAACG
ATCTCCTCAAAAAAGGGCGGGCCGCTCTAAAGAACCAAATTTAAGGTACG
GGGGCCTGGGGAG
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