EY756066
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of EY756066 vs. ExPASy Swiss-Prot
Match: CB26_ARATH (Chlorophyll a-b binding protein CP26, chloroplastic OS=Arabidopsis thaliana GN=LHCB5 PE=2 SV=1) HSP 1 Score: 404.445 bits (1038), Expect = 4.389e-112 Identity = 203/275 (73.82%), Postives = 225/275 (81.82%), Query Frame = 2 Query: 77 IGAKEMLGNPLNVSSAVRTSAPGASNPSTFKPVALFXXXXXXXXXXXXXXXXXXXNEELAKWYGPDRRIFLPEGLLDRSEIPEYLTGEVPGDYGYDPFGLSKKPDDFSKYQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPINLVFAVIAEIVLVGGAEYYRITNGLDLEDKLHPGGSFDPLGLAKDPDQFALLKVKEXQNGRLAMFAMLGFFLQAYVTGESPXENFA-NISVTFCHQPGYVIFGNAK 898 +G EMLG PLN + R+SAP AS+PSTFK VALF ++ELAKWYGPDRRIFLP+GLLDRSEIPEYL GEV GDYGYDPFGL KKP++F+KYQA+ELIHARWAMLGAAGFIIPEA NK+GANCGPEAVWFKTGALLLDGNTLNYFGKNIPINLV AV+AE+VL+GGAEYYRITNGLD EDKLHPGG FDPLGLAKDP+Q ALLKVKE +NGRLAMFAMLGFF+QAYVTGE P EN A ++S F + VI G A+ Sbjct: 4 LGVSEMLGTPLNFRAVSRSSAPLASSPSTFKTVALFSKKKPAPAKSKAVSET---SDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEVAGDYGYDPFGLGKKPENFAKYQAFELIHARWAMLGAAGFIIPEALNKYGANCGPEAVWFKTGALLLDGNTLNYFGKNIPINLVLAVVAEVVLLGGAEYYRITNGLDFEDKLHPGGPFDPLGLAKDPEQGALLKVKEIKNGRLAMFAMLGFFIQAYVTGEGPVENLAKHLSDPFGNNLLTVIAGTAE 275
BLAST of EY756066 vs. ExPASy Swiss-Prot
Match: CB2_DUNTE (Chlorophyll a-b binding protein of LHCII type I, chloroplastic OS=Dunaliella tertiolecta PE=2 SV=1) HSP 1 Score: 196.052 bits (497), Expect = 2.371e-49 Identity = 103/203 (50.74%), Postives = 131/203 (64.53%), Query Frame = 2 Query: 257 KWYGPDRRIFLPEGLLDRSEIPEYLTGEVPGDYGYDPFGLSKKPDDFSKYQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPI---NLVFAVIAEIVLVGGAEYYRITNG----LDLEDKLHPGGSFDPLGLAKDPDQFALLKVKEXQNGRLAMFAMLGFFLQAYVTGESPXENFAN 844 ++YGPDR FL G ++ PEYLTGE PGDYG+D GLS P F++Y+ ELIHARWA+LGA G + PE +++ E VWFK GA + LNY G I +++ + ++VL+G AE YR G LD D L+PGG FDPLGLA DPD FA LKVKE +NGRLAMF+ LGFF+QA VTG+ P +N + Sbjct: 32 EFYGPDRAKFL--GPFSENDTPEYLTGEFPGDYGWDTAGLSADPQTFARYREIELIHARWALLGALGILTPELLSQYAGVQFGEPVWFKAGAQIFADGGLNYLGNESLIHAQSIIATLAVQVVLMGLAEAYRANGGSEGFLDDLDTLYPGGPFDPLGLADDPDTFAELKVKEIKNGRLAMFSCLGFFVQAIVTGKGPVQNLTD 232
BLAST of EY756066 vs. ExPASy Swiss-Prot
Match: CB2B_PINSY (Chlorophyll a-b binding protein type 2 member 1B, chloroplastic OS=Pinus sylvestris PE=2 SV=1) HSP 1 Score: 193.356 bits (490), Expect = 1.537e-48 Identity = 102/200 (51.00%), Postives = 133/200 (66.50%), Query Frame = 2 Query: 260 WYGPDRRIFLPEGLLDRSEIPEYLTGEVPGDYGYDPFGLSKKPDDFSKYQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPINL--VFAVIA-EIVLVGGAEYYRITNGL--DLEDKLHPGGSFDPLGLAKDPDQFALLKVKEXQNGRLAMFAMLGFFLQAYVTGESPXENFAN 844 WYGPDR ++L E P YLTGE PGDYG+D GLS P++F+K + E+IH RWAMLGA G + PE + G G EAVWFK GA + L+Y G ++ + A+ A +++L+G E YRI G ++ D ++PGGSFDPLGLA+DP+ FA LKVKE +NGRLAMF+M GFF+QA VTG+ P EN A+ Sbjct: 58 WYGPDRVLYLGPF---SGEPPSYLTGEFPGDYGWDTAGLSADPENFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFG-EAVWFKAGAQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLAD 253
BLAST of EY756066 vs. ExPASy Swiss-Prot
Match: CB2A_PINSY (Chlorophyll a-b binding protein type 2 member 1A, chloroplastic OS=Pinus sylvestris PE=2 SV=1) HSP 1 Score: 192.2 bits (487), Expect = 3.424e-48 Identity = 102/200 (51.00%), Postives = 131/200 (65.50%), Query Frame = 2 Query: 260 WYGPDRRIFLPEGLLDRSEIPEYLTGEVPGDYGYDPFGLSKKPDDFSKYQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINLVFAVIA-EIVLVGGAEYYRITNGL--DLEDKLHPGGSFDPLGLAKDPDQFALLKVKEXQNGRLAMFAMLGFFLQAYVTGESPXENFAN 844 WYGPDR ++L E P YLTGE PGDYG+D GLS P+ F+K + E+IH+RWAMLGA G + PE + G G EAVWFK GA + L+Y G I + A+ A +++L+G E YR+ G ++ D ++PGG+FDPLGLA DPD FA LKVKE +NGRLAMF+M GFF+QA VTG+ P EN A+ Sbjct: 62 WYGPDRVLYLGPF---SGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVKFG-EAVWFKAGAQIFSEGGLDYLGSPQLIHAQSILAIWACQVILMGAIEGYRVAGGPLGEVTDPIYPGGNFDPLGLADDPDAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLAD 257
BLAST of EY756066 vs. ExPASy Swiss-Prot
Match: CB28_PEA (Chlorophyll a-b binding protein 8, chloroplastic OS=Pisum sativum GN=CAB8 PE=1 SV=1) HSP 1 Score: 192.2 bits (487), Expect = 3.424e-48 Identity = 103/200 (51.50%), Postives = 132/200 (66.00%), Query Frame = 2 Query: 260 WYGPDRRIFLPEGLLDRSEIPEYLTGEVPGDYGYDPFGLSKKPDDFSKYQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPINL--VFAVIA-EIVLVGGAEYYRITNGL--DLEDKLHPGGSFDPLGLAKDPDQFALLKVKEXQNGRLAMFAMLGFFLQAYVTGESPXENFAN 844 WYGPDR +L E P YLTGE PGDYG+D GLS P+ FSK + E+IH+RWAMLGA G + PE ++ G G EAVWFK G+ + L+Y G ++ + A+ A +++L+G E YRI G ++ D L+PGGSFDPLGLA DP+ FA LKVKE +NGRLAMF+M GFF+QA VTG+ P EN A+ Sbjct: 52 WYGPDRVKYLGPF---SGESPSYLTGEFPGDYGWDTAGLSADPETFSKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFG-EAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLAD 247
BLAST of EY756066 vs. ExPASy Swiss-Prot
Match: CB22_PEA (Chlorophyll a-b binding protein AB80, chloroplastic OS=Pisum sativum GN=AB80 PE=1 SV=1) HSP 1 Score: 192.2 bits (487), Expect = 3.424e-48 Identity = 103/200 (51.50%), Postives = 132/200 (66.00%), Query Frame = 2 Query: 260 WYGPDRRIFLPEGLLDRSEIPEYLTGEVPGDYGYDPFGLSKKPDDFSKYQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPINL--VFAVIA-EIVLVGGAEYYRITNGL--DLEDKLHPGGSFDPLGLAKDPDQFALLKVKEXQNGRLAMFAMLGFFLQAYVTGESPXENFAN 844 WYGPDR +L E P YLTGE PGDYG+D GLS P+ FSK + E+IH+RWAMLGA G + PE ++ G G EAVWFK G+ + L+Y G ++ + A+ A +++L+G E YRI G ++ D L+PGGSFDPLGLA DP+ FA LKVKE +NGRLAMF+M GFF+QA VTG+ P EN A+ Sbjct: 53 WYGPDRVKYLGPF---SGESPSYLTGEFPGDYGWDTAGLSADPETFSKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFG-EAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLAD 248
BLAST of EY756066 vs. ExPASy Swiss-Prot
Match: CB24_PETSP (Chlorophyll a-b binding protein 25, chloroplastic OS=Petunia sp. GN=CAB25 PE=3 SV=1) HSP 1 Score: 191.815 bits (486), Expect = 4.472e-48 Identity = 103/200 (51.50%), Postives = 131/200 (65.50%), Query Frame = 2 Query: 260 WYGPDRRIFLPEGLLDRSEIPEYLTGEVPGDYGYDPFGLSKKPDDFSKYQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPINL--VFAVIA-EIVLVGGAEYYRITNGL--DLEDKLHPGGSFDPLGLAKDPDQFALLKVKEXQNGRLAMFAMLGFFLQAYVTGESPXENFAN 844 WYGPDR +L E P YLTGE PGDYG+D GLS P+ F+K + E+IH RWAMLGA G + PE F + G G EAVWFK G+ + L+Y G ++ + A+ A ++VL+G E YR+ G ++ D L+PGGSFDPLGLA DP+ FA LKVKE +NGRLAMF+M GFF+QA VTG+ P EN A+ Sbjct: 50 WYGPDRVKYLGPF---SGEAPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELFARNGVKFG-EAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPLGEVIDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLAD 245
BLAST of EY756066 vs. ExPASy Swiss-Prot
Match: CB21_MAIZE (Chlorophyll a-b binding protein 1, chloroplastic OS=Zea mays GN=CAB1 PE=3 SV=1) HSP 1 Score: 191.43 bits (485), Expect = 5.840e-48 Identity = 104/200 (52.00%), Postives = 132/200 (66.00%), Query Frame = 2 Query: 260 WYGPDRRIFLPEGLLDRSEIPEYLTGEVPGDYGYDPFGLSKKPDDFSKYQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPINL--VFAVIA-EIVLVGGAEYYRITNGL--DLEDKLHPGGSFDPLGLAKDPDQFALLKVKEXQNGRLAMFAMLGFFLQAYVTGESPXENFAN 844 WYGPDR +L E P YLTGE PGDYG+D GLS P+ F+K + E+IH+RWAMLGA G + PE ++ G G EAVWFK G+ + L+Y G I+ + A+ A ++VL+G E YRI G ++ D L+PGGSFDPLGLA DP+ FA LKVKE +NGRLAMF+M GFF+QA VTG+ P EN A+ Sbjct: 46 WYGPDRVKYLGPF---SGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFG-EAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLAD 241
BLAST of EY756066 vs. ExPASy Swiss-Prot
Match: CB23_PETSP (Chlorophyll a-b binding protein 22R, chloroplastic OS=Petunia sp. GN=CAB22R PE=3 SV=1) HSP 1 Score: 191.045 bits (484), Expect = 7.627e-48 Identity = 103/200 (51.50%), Postives = 131/200 (65.50%), Query Frame = 2 Query: 260 WYGPDRRIFLPEGLLDRSEIPEYLTGEVPGDYGYDPFGLSKKPDDFSKYQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPINL--VFAVIA-EIVLVGGAEYYRITNGL--DLEDKLHPGGSFDPLGLAKDPDQFALLKVKEXQNGRLAMFAMLGFFLQAYVTGESPXENFAN 844 WYGPDR +L E P YLTGE P DYG+D GLS P+ F+K + E+IH RWAMLGA G + PE F + G G EAVWFK GA + L+Y G ++ + A+ A ++VL+G E YR+ G ++ D L+PGGSFDPLGLA+DP+ FA LKVKE +NGRLAMF+M GFF+QA VTG+ P EN A+ Sbjct: 51 WYGPDRVKYLGPF---SGEAPSYLTGEFPSDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELFARNGIKFG-EAVWFKAGAQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPLGEVIDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLAD 246
BLAST of EY756066 vs. ExPASy Swiss-Prot
Match: CB2B_SOLLC (Chlorophyll a-b binding protein 1B, chloroplastic OS=Solanum lycopersicum GN=CAB1B PE=3 SV=1) HSP 1 Score: 190.66 bits (483), Expect = 9.962e-48 Identity = 103/200 (51.50%), Postives = 131/200 (65.50%), Query Frame = 2 Query: 260 WYGPDRRIFLPEGLLDRSEIPEYLTGEVPGDYGYDPFGLSKKPDDFSKYQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPINL--VFAVIA-EIVLVGGAEYYRITNGL--DLEDKLHPGGSFDPLGLAKDPDQFALLKVKEXQNGRLAMFAMLGFFLQAYVTGESPXENFAN 844 WYGPDR +L E P YLTGE PGDYG+D GLS P+ F+K + E+IH RWAMLGA G + PE + G G EAVWFK G+ + L+Y G ++ + A+ A ++VL+G E YRI G ++ D L+PGGSFDPLGLA+DP+ FA LKVKE +NGRLAMF+M GFF+QA VTG+ P EN A+ Sbjct: 49 WYGPDRVKYLGPF---SGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFG-EAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLAD 244 The following BLAST results are available for this feature:
BLAST of EY756066 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 83
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Sequences
The
following sequences are available for this feature:
EST sequence >EY756066 ID=EY756066; Name=EY756066; organism=Citrus sinensis; type=EST; length=899bpback to top |