EY756061
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of EY756061 vs. ExPASy Swiss-Prot
Match: RL6_MESCR (60S ribosomal protein L6 OS=Mesembryanthemum crystallinum GN=RPL6 PE=2 SV=1) HSP 1 Score: 343.199 bits (879), Expect = 1.214e-93 Identity = 173/232 (74.57%), Postives = 187/232 (80.60%), Query Frame = 1 Query: 28 APKQGKPRVSRNPELIRGIGKFSRSKMYHKRGLWAIKAKNGGVFPRHDXXXXXXXXXXXXXXFYPADDVKKPLVNKRKPKPTKLRASITPGTVLIILAGRFKGKRVVFLKQLPSGLLLVSGPFKINGVPLRRVNQSYVIGTSTKVDISGVNVDKFDDKYFAKEVERXXXXXXXXXXXXXXXXXXXLPQEKKDDQKSVDTPLXQAIEAVPDLKAYLGARFSLRAGMKPHELVF 723 A KQ KP VSRNPEL+RGIGK+SRSKMYHKRGLWAIKAKNGGVFP+H FYPADDVKKPL+NKRKPKPTKLRASITPGTVLIILAGRFKGKRVVFLKQL SGLLLV+GPFK+NGVPLRRVNQ+YVI TSTKVDISGVNV+KFDDKYF K+ E+ LPQEKKDDQK+VD L +AIE VP+LKAYLGARFSL+AGMKPHELVF Sbjct: 3 AAKQRKPHVSRNPELVRGIGKYSRSKMYHKRGLWAIKAKNGGVFPKHAPKSADSKAVEKPPKFYPADDVKKPLINKRKPKPTKLRASITPGTVLIILAGRFKGKRVVFLKQLSSGLLLVTGPFKVNGVPLRRVNQAYVIATSTKVDISGVNVEKFDDKYFGKKAEKKNKKGEGEFFEAEKKEVNVLPQEKKDDQKAVDVALLKAIEGVPELKAYLGARFSLKAGMKPHELVF 234
BLAST of EY756061 vs. ExPASy Swiss-Prot
Match: RL61_ARATH (60S ribosomal protein L6-1 OS=Arabidopsis thaliana GN=RPL6A PE=2 SV=1) HSP 1 Score: 327.791 bits (839), Expect = 5.278e-89 Identity = 162/226 (71.68%), Postives = 182/226 (80.53%), Query Frame = 1 Query: 46 PRVSRNPELIRGIGKFSRSKMYHKRGLWAIKAKNGGVFPRHDXXXXXXXXXXXXXXFYPADDVKKPLVNKRKPKPTKLRASITPGTVLIILAGRFKGKRVVFLKQLPSGLLLVSGPFKINGVPLRRVNQSYVIGTSTKVDISGVNVDKFDDKYFAKEVERXXXXXXXXXXXXXXXXXXXLPQEKKDDQKSVDTPLXQAIEAVPDLKAYLGARFSLRAGMKPHELVF 723 P+V+RNP+LIRG+GK+SRS+MYHKRGLWAIKAKNGGVFPRHD FYPA+DVKKPLVN+RKPKPTKL+ASITPGTVLIILAGRFKGKRVVFLKQL SGLLLV+GPFKINGVPLRRVNQ+YVIGTSTK+DISGVN +KFDDKYF K E+ +PQEKK+DQK+VD L ++IEAVP+LK YLGARFSL GMKPHELVF Sbjct: 8 PKVNRNPDLIRGVGKYSRSQMYHKRGLWAIKAKNGGVFPRHDAQPKVDAPVEKPAKFYPAEDVKKPLVNRRKPKPTKLKASITPGTVLIILAGRFKGKRVVFLKQLSSGLLLVTGPFKINGVPLRRVNQAYVIGTSTKIDISGVNTEKFDDKYFGKVAEKKKKKTEGEFFEAEKEEKKEIPQEKKEDQKTVDAALIKSIEAVPELKVYLGARFSLSQGMKPHELVF 233
BLAST of EY756061 vs. ExPASy Swiss-Prot
Match: RL63_ARATH (60S ribosomal protein L6-3 OS=Arabidopsis thaliana GN=RPL6C PE=1 SV=1) HSP 1 Score: 326.25 bits (835), Expect = 1.536e-88 Identity = 165/233 (70.82%), Postives = 182/233 (78.11%), Query Frame = 1 Query: 25 MAPKQGKPRVSRNPELIRGIGKFSRSKMYHKRGLWAIKAKNGGVFPRHDXXXXXXXXXXXXXXFYPADDVKKPLVNKRKPKPTKLRASITPGTVLIILAGRFKGKRVVFLKQLPSGLLLVSGPFKINGVPLRRVNQSYVIGTSTKVDISGVNVDKFDDKYFAKEVERXXXXXXXXXXXXXXXXXXXLPQEKKDDQKSVDTPLXQAIEAVPDLKAYLGARFSLRAGMKPHELVF 723 M KQ P+V+RNP+LIRG+GK+SRS+MYHKRGLWAIKAKNGGVFPRHD FYPA+DVKKPL N+R KPTKLRASITPGTVLIILAGRFKGKRVVFLKQL SGLLLV+GPFKINGVPLRRVNQ+YVIGTSTKVDISGV +DKFDDKYF K E+ +PQ KKDDQK+VD L +AIEAVP+LK YLGARFSL+ GMKPHELVF Sbjct: 1 MPAKQRTPKVNRNPDLIRGVGKYSRSQMYHKRGLWAIKAKNGGVFPRHDAKSKVDAPVEKPPKFYPAEDVKKPLPNRRTAKPTKLRASITPGTVLIILAGRFKGKRVVFLKQLASGLLLVTGPFKINGVPLRRVNQAYVIGTSTKVDISGVTLDKFDDKYFGKVAEKKKKKTEGEFFEAEKEEKKEIPQVKKDDQKAVDAALIKAIEAVPELKTYLGARFSLKQGMKPHELVF 233
BLAST of EY756061 vs. ExPASy Swiss-Prot
Match: RL62_ARATH (60S ribosomal protein L6-2 OS=Arabidopsis thaliana GN=RPL6B PE=2 SV=1) HSP 1 Score: 321.242 bits (822), Expect = 4.940e-87 Identity = 163/233 (69.96%), Postives = 180/233 (77.25%), Query Frame = 1 Query: 25 MAPKQGKPRVSRNPELIRGIGKFSRSKMYHKRGLWAIKAKNGGVFPRHDXXXXXXXXXXXXXXFYPADDVKKPLVNKRKPKPTKLRASITPGTVLIILAGRFKGKRVVFLKQLPSGLLLVSGPFKINGVPLRRVNQSYVIGTSTKVDISGVNVDKFDDKYFAKEVERXXXXXXXXXXXXXXXXXXXLPQEKKDDQKSVDTPLXQAIEAVPDLKAYLGARFSLRAGMKPHELVF 723 M KQ +V+RNP+LIRG+GK+SRS+MYHKRGLWAIKAKNGGVFPRHD FYPA+DVKKPL N+R KP KLRASITPGTVLIILAGRFKGKRVVFLKQL SGLLLV+GPFKINGVPLRRVNQ+YVIGTSTKVDISGV +DKFDDKYF K E+ +PQ KKDDQK+VD L +AIEAVP+LK YLGARFSL+ GMKPHELVF Sbjct: 1 MPAKQRTAKVNRNPDLIRGVGKYSRSQMYHKRGLWAIKAKNGGVFPRHDAKSKVDAPVEKPPKFYPAEDVKKPLPNRRTAKPAKLRASITPGTVLIILAGRFKGKRVVFLKQLASGLLLVTGPFKINGVPLRRVNQAYVIGTSTKVDISGVTLDKFDDKYFGKVAEKKKKKTEGEFFEAEKEEKKEIPQGKKDDQKAVDAALIKAIEAVPELKTYLGARFSLKQGMKPHELVF 233
BLAST of EY756061 vs. ExPASy Swiss-Prot
Match: RL6_MOUSE (60S ribosomal protein L6 OS=Mus musculus GN=Rpl6 PE=1 SV=3) HSP 1 Score: 175.637 bits (444), Expect = 3.352e-43 Identity = 117/280 (41.79%), Postives = 149/280 (53.21%), Query Frame = 1 Query: 1 PRVRRVASMA------PKQGKPRVSRNPELIRGIGKFSRSKMYHKRGLWAIKA---------------------------KNGGVFPRHDXXXXXXXXXXXXXXFYPADDVKKPLVNKRKPKP-----TKLRASITPGTVLIILAGRFKGKRVVFLKQLPSGLLLVSGPFKINGVPLRRVNQSYVIGTSTKVDISGVNVDK-FDDKYFAKEVERXXXXXXXXXXXXXXXXXXXLPQEKKDDQKSVDTPLXQAIEAVPDLKAYLGARFSLRAGMKPHELVF 723 PR +VA PK+ KP SRNP L+RGIG++SRS MY ++ L+ K KNGG +YP +DV + L++ K KP +LR+SITPGTVLIIL GR +GKRVVFLKQL SGLLLV+GP IN VPLRR +Q +VI TSTKVDIS V + K D YF K+ R + +++K DQK+VD + I+AVP L+ YL ++FSL GM PH+LVF Sbjct: 28 PRAAKVAKKVHPKGKKPKKAKPHCSRNPVLVRGIGRYSRSAMYSRKALYKRKYSAAKTKVEKKKKKEKVLATVTKTVGGDKNGGT---------RVVKLRKMPRYYPTEDVPRKLLSHGK-KPFSQHVRRLRSSITPGTVLIILTGRHRGKRVVFLKQLDSGLLLVTGPLVINRVPLRRTHQKFVIATSTKVDISDVKIPKHLTDAYFKKKQLR-KPRHQEGEIFDTEKEKYEITEQRKADQKAVDLQILPKIKAVPQLQGYLRSQFSLTNGMYPHKLVF 296
BLAST of EY756061 vs. ExPASy Swiss-Prot
Match: RL6_PIG (60S ribosomal protein L6 OS=Sus scrofa GN=RPL6 PE=2 SV=3) HSP 1 Score: 174.096 bits (440), Expect = 9.754e-43 Identity = 109/262 (41.60%), Postives = 146/262 (55.73%), Query Frame = 1 Query: 34 KQGKPRVSRNPELIRGIGKFSRSKMYHKRGLWAIKA--------------------------KNGGVFPRHDXXXXXXXXXXXXXXFYPADDVKKPLVNKRKPKP-----TKLRASITPGTVLIILAGRFKGKRVVFLKQLPSGLLLVSGPFKINGVPLRRVNQSYVIGTSTKVDISGVNV-DKFDDKYFAKEVERXXXXXXXXXXXXXXXXXXXLPQEKKDDQKSVDTPLXQAIEAVPDLKAYLGARFSLRAGMKPHELVF 723 K+GKP SRNP L+RGIG++SRS MY ++ L+ K KNGG +YP +DV + L++ K KP KLRASITPGT+LIIL GR +GKRV+FLKQL SGLLLV+GP +N VPLRR +Q +VI TSTK+DISGV + + D YF K+ R + +++K DQK+VD+ + + I+AVP L+ YL + F+L G+ PH+LVF Sbjct: 34 KKGKPHCSRNPVLVRGIGRYSRSAMYSRKALYKRKYSAAKSKVEKKKKVRVLATVTKPVGGDKNGGT---------RVVKLRKMPRYYPTEDVPRKLLSHGK-KPFSKHVRKLRASITPGTILIILTGRHRGKRVIFLKQLSSGLLLVTGPLSLNRVPLRRTHQKFVIATSTKIDISGVKIPEHLTDAYFKKKKLR-KPRHQEGEIFDTEKEKYEISEQRKVDQKAVDSQILRRIKAVPQLQGYLRSVFALTNGIYPHKLVF 284
BLAST of EY756061 vs. ExPASy Swiss-Prot
Match: RL6_HUMAN (60S ribosomal protein L6 OS=Homo sapiens GN=RPL6 PE=1 SV=3) HSP 1 Score: 173.326 bits (438), Expect = 1.664e-42 Identity = 109/263 (41.44%), Postives = 145/263 (55.13%), Query Frame = 1 Query: 31 PKQGKPRVSRNPELIRGIGKFSRSKMYHKRGLWAIKA--------------------------KNGGVFPRHDXXXXXXXXXXXXXXFYPADDVKKPLVNKRKPKP-----TKLRASITPGTVLIILAGRFKGKRVVFLKQLPSGLLLVSGPFKINGVPLRRVNQSYVIGTSTKVDISGVNVDK-FDDKYFAKEVERXXXXXXXXXXXXXXXXXXXLPQEKKDDQKSVDTPLXQAIEAVPDLKAYLGARFSLRAGMKPHELVF 723 PK+GKP SRNP L+RGIG++SRS MY ++ ++ K KNGG +YP +DV + L++ K KP KLRASITPGT+LIIL GR +GKRVVFLKQL SGLLLV+GP +N VPLRR +Q +VI TSTK+DIS V + K D YF K+ R + +++K DQK+VD+ + I+A+P L+ YL + F+L G+ PH+LVF Sbjct: 37 PKKGKPHCSRNPVLVRGIGRYSRSAMYSRKAMYKRKYSAAKSKVEKKKKEKVLATVTKPVGGDKNGGT---------RVVKLRKMPRYYPTEDVPRKLLSHGK-KPFSQHVRKLRASITPGTILIILTGRHRGKRVVFLKQLASGLLLVTGPLVLNRVPLRRTHQKFVIATSTKIDISNVKIPKHLTDAYFKKKKLR-KPRHQEGEIFDTEKEKYEITEQRKIDQKAVDSQILPKIKAIPQLQGYLRSVFALTNGIYPHKLVF 288
BLAST of EY756061 vs. ExPASy Swiss-Prot
Match: RL6_BOVIN (60S ribosomal protein L6 OS=Bos taurus GN=RPL6 PE=2 SV=3) HSP 1 Score: 172.94 bits (437), Expect = 2.173e-42 Identity = 109/262 (41.60%), Postives = 146/262 (55.73%), Query Frame = 1 Query: 34 KQGKPRVSRNPELIRGIGKFSRSKMYHKRGLWAIKA--------------------------KNGGVFPRHDXXXXXXXXXXXXXXFYPADDVKKPLVNKRKPKP-----TKLRASITPGTVLIILAGRFKGKRVVFLKQLPSGLLLVSGPFKINGVPLRRVNQSYVIGTSTKVDISGVNV-DKFDDKYFAKEVERXXXXXXXXXXXXXXXXXXXLPQEKKDDQKSVDTPLXQAIEAVPDLKAYLGARFSLRAGMKPHELVF 723 K+GKP SRNP L+RGIG++SRS MY ++ L+ K KNGG +YP +DV + L++ K KP KLRASITPGT+LIIL GR +GKRVVFLKQL SGLLLV+GP +N VPLRR +Q +VI TSTK+DISGV + + D YF K+ R + +++K DQK+VD+ + + I+AVP L+ YL + F+L G+ PH++VF Sbjct: 37 KKGKPHCSRNPVLVRGIGRYSRSAMYSRKALYKRKYSAAKSKVEKKKKVRVLATVTKPVGGDKNGGT---------RVVKLRKMPRYYPTEDVPRKLLSHGK-KPFSKHVRKLRASITPGTILIILTGRHRGKRVVFLKQLGSGLLLVTGPLSLNRVPLRRTHQKFVIATSTKIDISGVKIPEHLTDTYFKKKKLR-KPRHQEGEIFDTEREKYEITEQRKVDQKAVDSQILRRIKAVPQLQGYLRSVFALTNGIYPHKVVF 287
BLAST of EY756061 vs. ExPASy Swiss-Prot
Match: RL6_CHILA (60S ribosomal protein L6 OS=Chinchilla lanigera GN=RPL6 PE=2 SV=3) HSP 1 Score: 172.17 bits (435), Expect = 3.707e-42 Identity = 111/268 (41.42%), Postives = 146/268 (54.48%), Query Frame = 1 Query: 16 VASMAPKQGKPRVSRNPELIRGIGKFSRSKMYHKRGLWAIKA--------------------------KNGGVFPRHDXXXXXXXXXXXXXXFYPADDVKKPLVNKRKPKP-----TKLRASITPGTVLIILAGRFKGKRVVFLKQLPSGLLLVSGPFKINGVPLRRVNQSYVIGTSTKVDISGVNVDK-FDDKYFAKEVERXXXXXXXXXXXXXXXXXXXLPQEKKDDQKSVDTPLXQAIEAVPDLKAYLGARFSLRAGMKPHELVF 723 V + K+G+P SRNP L+RGIG++SRS MY ++ L+ K KNGG +YP +DV + L++ K KP KLRASITPGTVLIIL GR +GKRVVFLKQL SGLLLV+GP +N VPLRR +Q +VI TSTK+DIS V + K D YF K+ R + +++K DQK+VD+ + I+AVP L+ YL + F+L G+ PH+LVF Sbjct: 32 VKAKKSKKGQPHCSRNPVLVRGIGRYSRSAMYSRKALYKRKYTAAKSKVEKKKKEKVLATVTKPVGGDKNGGT---------RVVKLRKMPRYYPTEDVPRKLLSHGK-KPFSQHVRKLRASITPGTVLIILTGRHRGKRVVFLKQLASGLLLVTGPLNLNRVPLRRTHQKFVIATSTKIDISNVKIPKHLTDAYFKKKKLR-KPRHQEGEIFDTEKERYQISEQRKVDQKAVDSQILPKIKAVPQLRGYLRSVFALTNGIYPHKLVF 288
BLAST of EY756061 vs. ExPASy Swiss-Prot
Match: RL6_RAT (60S ribosomal protein L6 OS=Rattus norvegicus GN=Rpl6 PE=1 SV=5) HSP 1 Score: 171.4 bits (433), Expect = 6.322e-42 Identity = 114/274 (41.61%), Postives = 150/274 (54.74%), Query Frame = 1 Query: 7 VRRVASMAPK--QGKPRVSRNPELIRGIGKFSRSKMYHKRGLWAIKA---------------------------KNGGVFPRHDXXXXXXXXXXXXXXFYPADDVKKPLVNKRKPKP-----TKLRASITPGTVLIILAGRFKGKRVVFLKQLPSGLLLVSGPFKINGVPLRRVNQSYVIGTSTKVDISGVNVDK-FDDKYFAKEVERXXXXXXXXXXXXXXXXXXXLPQEKKDDQKSVDTPLXQAIEAVPDLKAYLGARFSLRAGMKPHELVF 723 V++ +S A K + KP SRNP L+RGIG++SRS MY ++ L+ K KNGG +YP +DV + L++ K KP +LR+SITPGTVLIIL GR +GKRVVFLKQL SGLLLV+GP +N VPLRR +Q +VI TSTKVDIS V + K D YF K+ R + +++K DQK+VD+ + I+AVP L+ YL ++FSL GM PH+LVF Sbjct: 36 VKKSSSKAKKLRKSKPHCSRNPVLVRGIGRYSRSAMYSRKALYKRKYSAAKTKVEKKKKKEKVLATVTKTVGGDKNGGT---------RVVKLRKMPRYYPTEDVPRKLLSHGK-KPFSQHVRRLRSSITPGTVLIILTGRHRGKRVVFLKQLGSGLLLVTGPLALNRVPLRRTHQKFVIATSTKVDISKVKIPKHLTDAYFKKKPLR-KPRHQEGEIFDTEKEKYEITEQRKADQKAVDSQILPKIKAVPQLQGYLRSQFSLTNGMYPHKLVF 298 The following BLAST results are available for this feature:
BLAST of EY756061 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 15
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Sequences
The
following sequences are available for this feature:
EST sequence >EY756061 ID=EY756061; Name=EY756061; organism=Citrus sinensis; type=EST; length=904bpback to top |