EY756042

Overview
NameEY756042
Unique NameEY756042
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length899
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig13300 contig Csv1_Contig13300:1..899. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
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BLAST of EY756042 vs. ExPASy Swiss-Prot
Match: UGPI7_ARATH (Uncharacterized GPI-anchored protein At4g28100 OS=Arabidopsis thaliana GN=At4g28100 PE=1 SV=1)

HSP 1 Score: 188.734 bits (478), Expect = 3.785e-47
Identity = 106/249 (42.57%), Postives = 148/249 (59.44%), Query Frame = 1 
Query:   61 LTRSRCCPVLATWLYAAYSATALGRAATETAKTPATRSVDLPLLPDDSETCVDDLGKAMKQRGIDLPRPNETCDVVYCYCGIRLHP---LTCPEAFSLNPRGK-LVGNVNVKRLERHCLSSSNNVNGFPGLGGCNKCLNSLYQLNKKTFNTSKAEDRTTKMHNKDCQLMGLTWLLEKNRTAYIHTVSAVIRAMMLSRDGFEPQSCTLSSDGMPLAVDSSDI---YNQSSSITLAVPFYLSFVSLWLLFM 786
            L RSRCCPVLA WL+AA++ +AL   A   A TP +   D P+ PDDS+ CV+ L  A+  + I +P+PN +CD + C+CGIRLH    L+CP AF+++   K       VK LE+ C +SS +        GC +CL +L +L  +  N     +R TKM +KDCQLMGLTWLL +N+TAYI TVSAV+RA+M S        C+   + MPLAVDS      ++ SS +   +PF    + ++L  +
Sbjct:   66 LDRSRCCPVLAAWLFAAHARSALQLPAP--APTPESSDPDEPMKPDDSQKCVNTLQSALLTKQIKIPQPNSSCDAILCFCGIRLHQISSLSCPAAFNVSSGFKNATPTAAVKNLEKECRNSSYS--------GCTRCLGALQKLKVRGGNKKTTTERGTKMMSKDCQLMGLTWLLARNKTAYIPTVSAVLRAIMYSPHPPHLNKCSPDQENMPLAVDSLQFQKSFSSSSHLFGVLPFLPLVLCIFLFLL 304
The following BLAST results are available for this feature:
BLAST of EY756042 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
UGPI7_ARATH3.785e-4742.57Uncharacterized GPI-anchored protein At4g28100 OS=... [more]
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Properties
Property NameValue
Genbank descriptionCS13-C1-001-002-H10-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY756042 ID=EY756042; Name=EY756042; organism=Citrus sinensis; type=EST; length=899bp
TTCGGTCGACCCCGCGTCCGCACCGGAGTACACCTCACCACCACGCAGGC
CTCTTCCCAGCTGACGCGCAGCCGATGCTGCCCTGTCCTCGCCACGTGGC
TCTACGCTGCCTACTCCGCCACCGCCCTCGGCAGAGCAGCTACAGAAACA
GCAAAGACCCCCGCCACCAGGTCTGTGGACCTGCCGTTGCTCCCCGACGA
CTCTGAGACCTGCGTTGATGATTTGGGGAAAGCCATGAAACAGAGAGGCA
TTGATCTGCCGAGACCCAACGAGACTTGCGATGTTGTGTACTGTTACTGT
GGCATTCGACTGCATCCTCTGACTTGCCCGGAAGCTTTTTCTTTGAATCC
GAGAGGAAAGCTTGTTGGGAATGTGAACGTGAAGAGGCTGGAGAGGCACT
GCTTGAGTAGCAGCAACAATGTCAATGGATTCCCAGGTCTTGGTGGCTGT
AACAAGTGCTTGAATTCTCTCTATCAGCTTAACAAGAAGACTTTTAATAC
AAGCAAAGCAGAGGACAGGACCACCAAAATGCACAACAAAGATTGTCAGT
TGATGGGCCTCACATGGCTTCTTGAAAAAAATCGAACGGCATACATTCAC
ACGGTTTCCGCTGTCATACGAGCTATGATGTTGAGCAGAGACGGCTTTGA
ACCTCAGTCATGCACTCTTAGCAGCGATGGAATGCCTCTAGCCGTTGATT
CTTCGGATATTTACAACCAATCTTCCTCGATCACTCTTGCGGTTCCTTTC
TACCTCTCCTTTGTATCACTTTGGTTGTTATTCATGTTCTTTGCTGTATC
ATCCTCACGGNNTTTATTTAGTGAATGGAAACTGCCATGTTGTTTNNNNN
NNANNNNNNNNNNNNNNNNNNNNNNNNNAAGGGCGGCGCTCTAGAGATC
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