EY755979

Overview
NameEY755979
Unique NameEY755979
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length771
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
EY755979_ssr35 microsatellite EY755979_ssr35:35..44. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig10338 contig Csv1_Contig10338:20..768. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY755979 vs. ExPASy Swiss-Prot
Match: RL141_ARATH (60S ribosomal protein L14-1 OS=Arabidopsis thaliana GN=RPL14A PE=2 SV=1)

HSP 1 Score: 221.09 bits (562), Expect = 5.386e-57
Identity = 112/134 (83.58%), Postives = 123/134 (91.79%), Query Frame = 3
Query:   69 MPFKRFVAIGRVALVNYGKEYGRLVVIVDVLDQNRALVDAPDMVRGQMNFKRLSLTDIKIDIPRVPKKKTLIDAMEKADVKNKWESSSWGRKLIVQKKRASLNDFDRFKLMLAKIKKGGLVRQELAKLKKENAA 470
            M FKRFV IGRVALVNYG++YG+LVVIVDV+DQNRALVDAPDM R QMN KRLSLTDI IDI RVPKKK LI+AMEKADVKNKWE SSWGRKLIVQK+RA+LNDFDRFK+MLAKIK+ G+VRQELAKLK+E AA
Sbjct:    1 MGFKRFVEIGRVALVNYGEDYGKLVVIVDVVDQNRALVDAPDMERIQMNLKRLSLTDIVIDINRVPKKKVLIEAMEKADVKNKWEKSSWGRKLIVQKRRAALNDFDRFKIMLAKIKRAGIVRQELAKLKREIAA 134          
BLAST of EY755979 vs. ExPASy Swiss-Prot
Match: RL142_ARATH (60S ribosomal protein L14-2 OS=Arabidopsis thaliana GN=RPL14B PE=2 SV=1)

HSP 1 Score: 220.705 bits (561), Expect = 7.034e-57
Identity = 112/134 (83.58%), Postives = 123/134 (91.79%), Query Frame = 3
Query:   69 MPFKRFVAIGRVALVNYGKEYGRLVVIVDVLDQNRALVDAPDMVRGQMNFKRLSLTDIKIDIPRVPKKKTLIDAMEKADVKNKWESSSWGRKLIVQKKRASLNDFDRFKLMLAKIKKGGLVRQELAKLKKENAA 470
            M FKR+V IGRVALVNYG+++G+LVVIVDV+DQNRALVDAPDM R QMNFKRLSLTDI IDI RVPKKK LI+AMEKADVKNKWE SSWGRKLIVQK+RA+LNDFDRFK+MLAKIKK G+VRQELAKLKKE  A
Sbjct:    1 MGFKRYVEIGRVALVNYGEDHGKLVVIVDVVDQNRALVDAPDMERIQMNFKRLSLTDIVIDINRVPKKKALIEAMEKADVKNKWEKSSWGRKLIVQKRRANLNDFDRFKIMLAKIKKAGVVRQELAKLKKEITA 134          
BLAST of EY755979 vs. ExPASy Swiss-Prot
Match: RL14_PEA (Probable 60S ribosomal protein L14 OS=Pisum sativum PE=2 SV=1)

HSP 1 Score: 210.305 bits (534), Expect = 9.507e-54
Identity = 106/133 (79.70%), Postives = 116/133 (87.22%), Query Frame = 3
Query:   69 MPFKRFVAIGRVALVNYGKEYGRLVVIVDVLDQNRALVDAPDMVRGQMNFKRLSLTDIKIDIPRVPKKKTLIDAMEKADVKNKWESSSWGRKLIVQKKRASLNDFDRFKLMLAKIKKGGLVRQELAKLKKENA 467
            MPFKRFV IGRVAL+NYGK+YGRLVVIVDV+DQ RALVDAPDM R  +NFKRLSLTD+KIDI RVPKKK LI A+E ADVKNKW  SSWGRKLIV+K RA+LNDFDRFK+MLAKIK+   VRQELAKLKK  A
Sbjct:    1 MPFKRFVEIGRVALINYGKDYGRLVVIVDVIDQTRALVDAPDMERSPINFKRLSLTDLKIDIKRVPKKKDLIKALEAADVKNKWAKSSWGRKLIVKKTRAALNDFDRFKIMLAKIKRAAGVRQELAKLKKTAA 133          
BLAST of EY755979 vs. ExPASy Swiss-Prot
Match: RL14_LUMRU (60S ribosomal protein L14 OS=Lumbricus rubellus GN=RPL14 PE=3 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 3.405e-27
Identity = 64/132 (48.48%), Postives = 84/132 (63.64%), Query Frame = 3
Query:   69 MPFKRFVAIGRVALVNYGKEYGRLVVIVDVLDQNRALVDAP--DMVRGQMNFKRLSLTDIKIDIPRVPKKKTLIDAMEKADVKNKWESSSWGRKLIVQKKRASLNDFDRFKLMLAKIKKGGLVRQELAKLKK 458
            M F+RFV IGRVA   YG + G+LV IVDV+DQNRALVD P   + R  MNFK L LT++K   P   K   +  A EK ++  KWE S   +K+  ++KR +L DF+RFKLM AK  +  L++ E  KL+K
Sbjct:    1 MSFRRFVEIGRVARAVYGPDQGKLVAIVDVIDQNRALVDGPCTHVARKSMNFKELELTNLKAKFPHSAKTGVVKKAWEKDEISKKWEESHLAKKIAAKEKRKTLTDFERFKLMKAKQARNRLIKIEFGKLRK 132          
BLAST of EY755979 vs. ExPASy Swiss-Prot
Match: RL14_PIG (60S ribosomal protein L14 OS=Sus scrofa GN=RPL14 PE=2 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 3.765e-26
Identity = 59/132 (44.70%), Postives = 88/132 (66.67%), Query Frame = 3
Query:   69 MPFKRFVAIGRVALVNYGKEYGRLVVIVDVLDQNRALVDAP--DMVRGQMNFKRLSLTDIKIDIPRVPKKKTLIDAMEKADVKNKWESSSWGRKLIVQKKRASLNDFDRFKLMLAKIKKGGLVRQELAKLKK 458
            M F+RFV +GRVA V++G   G+LV IVDV+DQNRALVD P   + R  M FK + LTD  +  P   ++K +  A EKAD+  KW ++ W +K+  ++K+A + DFDR+K+M A+  +  L++ E+ KL+K
Sbjct:    1 MVFRRFVEVGRVAYVSFGPHAGKLVAIVDVIDQNRALVDGPCTQVRRQAMPFKCMQLTDFILKFPHSARQKYVRKAWEKADINAKWAATRWAKKIEAREKKAKMTDFDRYKVMKARKMRNRLIKLEVKKLQK 132          
BLAST of EY755979 vs. ExPASy Swiss-Prot
Match: RL14_HUMAN (60S ribosomal protein L14 OS=Homo sapiens GN=RPL14 PE=1 SV=4)

HSP 1 Score: 118.627 bits (296), Expect = 3.765e-26
Identity = 58/132 (43.94%), Postives = 87/132 (65.91%), Query Frame = 3
Query:   69 MPFKRFVAIGRVALVNYGKEYGRLVVIVDVLDQNRALVDAP--DMVRGQMNFKRLSLTDIKIDIPRVPKKKTLIDAMEKADVKNKWESSSWGRKLIVQKKRASLNDFDRFKLMLAKIKKGGLVRQELAKLKK 458
            M F+RFV +GRVA V++G   G+LV IVDV+DQNRALVD P   + R  M FK + LTD  +  P    +K +  A +KAD+  KW ++ W +K+  ++++A + DFDRFK+M AK  +  +++ E+ KL+K
Sbjct:    1 MVFRRFVEVGRVAYVSFGPHAGKLVAIVDVIDQNRALVDGPCTQVRRQAMPFKCMQLTDFILKFPHSAHQKYVRQAWQKADINTKWAATRWAKKIEARERKAKMTDFDRFKVMKAKKMRNRIIKNEVKKLQK 132          
BLAST of EY755979 vs. ExPASy Swiss-Prot
Match: RL14_RAT (60S ribosomal protein L14 OS=Rattus norvegicus GN=Rpl14 PE=1 SV=3)

HSP 1 Score: 118.242 bits (295), Expect = 4.917e-26
Identity = 59/132 (44.70%), Postives = 89/132 (67.42%), Query Frame = 3
Query:   69 MPFKRFVAIGRVALVNYGKEYGRLVVIVDVLDQNRALVDAP-DMVRGQ-MNFKRLSLTDIKIDIPRVPKKKTLIDAMEKADVKNKWESSSWGRKLIVQKKRASLNDFDRFKLMLAKIKKGGLVRQELAKLKK 458
            M F+RFV +GRVA +++G   G+LV IVDV+DQNRALVD P   VR Q M FK + LTD  +  P   ++K +  A EKAD+  KW ++ W +K+  ++++A + DFDRFK+M AK  +  +++ E+ KL++
Sbjct:    1 MVFRRFVEVGRVAYISFGPHAGKLVAIVDVIDQNRALVDGPCTRVRRQAMPFKCMQLTDFILKFPHSARQKYVRKAWEKADINTKWAATRWAKKIDARERKAKMTDFDRFKVMKAKKMRNRIIKTEVKKLQR 132          
BLAST of EY755979 vs. ExPASy Swiss-Prot
Match: RL14_BOVIN (60S ribosomal protein L14 OS=Bos taurus GN=RPL14 PE=2 SV=3)

HSP 1 Score: 118.242 bits (295), Expect = 4.917e-26
Identity = 59/132 (44.70%), Postives = 88/132 (66.67%), Query Frame = 3
Query:   69 MPFKRFVAIGRVALVNYGKEYGRLVVIVDVLDQNRALVDAP--DMVRGQMNFKRLSLTDIKIDIPRVPKKKTLIDAMEKADVKNKWESSSWGRKLIVQKKRASLNDFDRFKLMLAKIKKGGLVRQELAKLKK 458
            M F+RFV +GRVA V++G   G+LV IVDV+DQNRALVD P   + R  M FK + LTD  +  P   ++K +  A EKAD+  KW ++ W +K+  ++K+A + DFDR+K+M A+  +  L++ E+ KL+K
Sbjct:    1 MVFRRFVEVGRVAYVSFGPHAGKLVAIVDVIDQNRALVDGPCTQVRRQAMPFKCMQLTDFILKFPHSARQKYVRKAWEKADINAKWAATRWAKKIEAREKKAKMTDFDRYKVMKARKMRNRLIKIEVKKLQK 132          
BLAST of EY755979 vs. ExPASy Swiss-Prot
Match: RL14_MOUSE (60S ribosomal protein L14 OS=Mus musculus GN=Rpl14 PE=2 SV=3)

HSP 1 Score: 117.087 bits (292), Expect = 1.095e-25
Identity = 58/132 (43.94%), Postives = 89/132 (67.42%), Query Frame = 3
Query:   69 MPFKRFVAIGRVALVNYGKEYGRLVVIVDVLDQNRALVDAP-DMVRGQ-MNFKRLSLTDIKIDIPRVPKKKTLIDAMEKADVKNKWESSSWGRKLIVQKKRASLNDFDRFKLMLAKIKKGGLVRQELAKLKK 458
            M F+R+V +GRVA +++G   G+LV IVDV+DQNRALVD P   VR Q M FK + LTD  +  P   ++K +  A EKAD+  KW ++ W +K+  ++++A + DFDRFK+M AK  +  +++ E+ KL++
Sbjct:    1 MVFRRYVEVGRVAYISFGPHAGKLVAIVDVIDQNRALVDGPCTRVRRQAMPFKCMQLTDFILKFPHSARQKYVRKAWEKADINTKWAATRWAKKIDARERKAKMTDFDRFKVMKAKKMRNRIIKTEVKKLQR 132          
BLAST of EY755979 vs. ExPASy Swiss-Prot
Match: RL14_GRIJA (60S ribosomal protein L14 OS=Griffithsia japonica GN=RPL14 PE=2 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 1.868e-25
Identity = 65/132 (49.24%), Postives = 88/132 (66.67%), Query Frame = 3
Query:   69 MPFKRFVAIGRVALVNYGKEYGRLVVIVDVLDQNRALVDAPD--MVRGQMNFKRLSLTDIKI-DIPRVPKKKTLIDAMEKADVKNKWESSSWGRKLIVQKKRASLNDFDRFKLMLAKIKKGGLVRQELAKLK 455
            M F RFV  GRVALV+YG+   +LVVIVD+LDQNR LVD+P   + R  +N KR++LT IK+ DI R      +      A V   + +S WG+KL  ++KRA+L+DF RFK+M+A++KK   +  ELAKLK
Sbjct:    1 MTFTRFVEAGRVALVSYGEHLNKLVVIVDILDQNRILVDSPSHGLKRKVINVKRIALTSIKVDDIARGAPVAEVKSKYTAAKVDETFAASGWGKKLAKREKRAALDDFGRFKVMVARMKKSKAINAELAKLK 132          
The following BLAST results are available for this feature:
BLAST of EY755979 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 16
Match NameE-valueIdentityDescription
RL141_ARATH5.386e-5783.5860S ribosomal protein L14-1 OS=Arabidopsis thalian... [more]
RL142_ARATH7.034e-5783.5860S ribosomal protein L14-2 OS=Arabidopsis thalian... [more]
RL14_PEA9.507e-5479.70Probable 60S ribosomal protein L14 OS=Pisum sativu... [more]
RL14_LUMRU3.405e-2748.4860S ribosomal protein L14 OS=Lumbricus rubellus GN... [more]
RL14_PIG3.765e-2644.7060S ribosomal protein L14 OS=Sus scrofa GN=RPL14 P... [more]
RL14_HUMAN3.765e-2643.9460S ribosomal protein L14 OS=Homo sapiens GN=RPL14... [more]
RL14_RAT4.917e-2644.7060S ribosomal protein L14 OS=Rattus norvegicus GN=... [more]
RL14_BOVIN4.917e-2644.7060S ribosomal protein L14 OS=Bos taurus GN=RPL14 P... [more]
RL14_MOUSE1.095e-2543.9460S ribosomal protein L14 OS=Mus musculus GN=Rpl14... [more]
RL14_GRIJA1.868e-2549.2460S ribosomal protein L14 OS=Griffithsia japonica ... [more]

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Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Properties
Property NameValue
Genbank descriptionCS13-C1-001-002-B12-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY755979 ID=EY755979|Name=EY755979|organism=Citrus sinensis|type=EST|length=771bp
TTCGTAGAGGGCGCGTCCGGCTGGGTTTCACACAACACACACACCATCAC
CAACCAGAATCCCCAAAAATGCCGTTCAAGAGGTTTGTGGCGATCGGGAG
GGTCGCCCTCGTCAACTACGGCAAAGAATACGGCAGGCTCGTCGTCATCG
TAGATGTCTTAGATCAGAACAGAGCTCTAGTTGATGCCCCTGATATGGTG
AGAGGCCAAATGAACTTCAAGAGGCTTTCACTGACTGATATCAAAATTGA
CATTCCCCGTGTACCGAAGAAGAAGACATTGATTGATGCTATGGAGAAGG
CTGATGTTAAGAACAAGTGGGAAAGTAGCTCTTGGGGAAGAAAGCTGATT
GTTCAGAAGAAGAGAGCATCACTTAATGACTTTGACAGGTTCAAGCTTAT
GTTGGCCAAGATCAAGAAGGGAGGTTTGGTCAGGCAGGAGCTTGCTAAGC
TGAAGAAGGAGAATGCAGCCTAATGTTATCCGATGTGTAGCTTCCAATTT
TGTTGTGATGATGGCTAAATTTTCTTCAAGAACGTTTTACATTTATTTTT
GTGTCAGTTCTGAGATTAAGACCAATTTAAGGAGATGCTTTTTATATTAT
GATACTGTAGTCAGTGTTACCTGCAAATCCTTCTTGTCTGCAGGCTTGTT
TTACTTTTTAAGAATTTTTACCTGGATGTATTATCATCCTTGTGTTTCAT
TTGCTACTAATTTGAAAATTACGAATGGTGGGGCCAATGATTTGTCTAAA
AAAAAAAAAAAAAAAAAAAAA
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