EY755963

Overview
NameEY755963
Unique NameEY755963
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length786
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY755963 vs. ExPASy Swiss-Prot
Match: FB2_ARATH (F-box protein At1g10780 OS=Arabidopsis thaliana GN=At1g10780 PE=2 SV=1)

HSP 1 Score: 251.521 bits (641), Expect = 3.810e-66
Identity = 122/168 (72.62%), Postives = 144/168 (85.71%), Query Frame = 3 
Query:   21 MVVFGKLVALESLTLRGVQWCCDPISKMLYWASEVKHLYMKVEFTGDFDTLQPFPEVDFVEFFNNHPKLQKFDIHGAMFAALCQKNSLKNVESGFVIPCLEEVVVTVRSPLNAEQKMSTLESLLKYGKNLKTMVIRILQMKSSHSSSDDFLDEICRFRCMNRKIVRIE 524
            MV F  L +LE+L++RGVQWC D I  +L  A +VKHL+MKVEFTG+ + LQPFPE+DFVEFFNNHPKLQ FDIHGAMFAALCQKNSLK +E+GF IPCLEEVV+TVRSPLNAEQKM+TLESL+KY + LK MVIRIL+MKS+HSS+DDF D+IC+FR MN  +V IE
Sbjct:  252 MVDFNNLSSLEALSIRGVQWCWDAICMILQQARDVKHLFMKVEFTGN-EALQPFPEIDFVEFFNNHPKLQTFDIHGAMFAALCQKNSLKKLETGFTIPCLEEVVITVRSPLNAEQKMNTLESLVKYARGLKRMVIRILRMKSNHSSADDFCDDICKFRHMNEHLVHIE 418
The following BLAST results are available for this feature:
BLAST of EY755963 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
FB2_ARATH3.810e-6672.62F-box protein At1g10780 OS=Arabidopsis thaliana GN... [more]
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Properties
Property NameValue
Genbank descriptionCS13-C1-001-002-A06-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY755963 ID=EY755963; Name=EY755963; organism=Citrus sinensis; type=EST; length=786bp
ATACAACAGCGGCGTCCGACATGGTCGTTTTCGGAAAGCTTGTGGCTCTT
GAGTCCTTGACCTTAAGAGGGGTTCAGTGGTGTTGTGATCCAATTAGCAA
AATGCTTTATTGGGCAAGTGAGGTGAAGCATCTATACATGAAGGTTGAAT
TCACTGGGGACTTTGATACACTTCAGCCCTTTCCGGAGGTTGACTTCGTT
GAATTCTTTAATAACCACCCTAAATTGCAGAAGTTTGATATCCATGGGGC
AATGTTCGCTGCTCTTTGCCAAAAGAACAGCCTGAAAAATGTAGAATCAG
GATTTGTGATTCCATGTCTGGAGGAGGTGGTGGTCACAGTAAGATCACCT
TTAAATGCTGAACAGAAAATGAGCACTCTTGAGTCACTGTTGAAGTATGG
GAAAAATTTGAAGACAATGGTAATACGAATTCTTCAAATGAAGAGCAGCC
ACAGCAGTTCAGATGATTTCCTTGACGAGATTTGCCGGTTTAGATGCATG
AATCGCAAAATAGTTCGTATTGAATAGAGCCTACACAGGCCAATTGAATA
GAGGCTACACGGGCCAATTCTTCTTTAATTTATCCCATTTCAGTTGACAT
TGTTTCCCTGATTTAGTAGTTTTGACTGCTGATTTGATTAAAACTTAATC
ATTCTTTAATGATTGGGTTTCCCCCNNGNNNNTNCTNNNNTGNNGNANAA
AATAAAAAAAAAAAAGAGGGCGGCCGTTCCTAAGGATCAAACTTTACTAC
CCGTGCTTGCCAATCATTGCCTCTCTTTGGGCCCCC
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