EY755959

Overview
NameEY755959
Unique NameEY755959
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length889
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig12024 contig Csv1_Contig12024:80..885. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY755959 vs. ExPASy Swiss-Prot
Match: UXS1_RAT (UDP-glucuronic acid decarboxylase 1 OS=Rattus norvegicus GN=Uxs1 PE=1 SV=1)

HSP 1 Score: 282.337 bits (721), Expect = 2.461e-75
Identity = 135/219 (61.64%), Postives = 166/219 (75.80%), Query Frame = 3
Query:  117 KTNVVGTLNMLGLAKRVGARFLLTSTSEVYGDPLQHPQAETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGLGIEARIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVEGLIRLMEGDHVGPFNLGNPGEFTMLELAEVVQEIIDRNARIEFRPNTEDDPHKRKPDITKAKQLLGWEPRVTLRKGLPLMVADFRHRI 773
            KTN +GTLNMLGLAKRVGAR LL STSEVYGDP  HPQ+E YWG+VNPIG R+CYDEGKR AET+   Y +  G+E R+ARIFNT+GPRM ++DGRVVSNF+ QAL+ EPLTVYG G QTR+FQ+VSDLV GL+ LM  +   P NLGNP E T+LE A++++ ++   + I+F    +DDP KRKPDI KAK +LGWEP V L +GL   +  FR  +
Sbjct:  177 KTNTIGTLNMLGLAKRVGARLLLASTSEVYGDPEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVARIFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLVNGLVALMNSNVSSPVNLGNPEEHTILEFAQLIKNLVGSGSEIQFLSEAQDDPQKRKPDIKKAKLMLGWEPVVPLEEGLNKAIHYFRKEL 395          
BLAST of EY755959 vs. ExPASy Swiss-Prot
Match: UXS1_PONAB (UDP-glucuronic acid decarboxylase 1 OS=Pongo abelii GN=UXS1 PE=2 SV=1)

HSP 1 Score: 282.337 bits (721), Expect = 2.461e-75
Identity = 135/219 (61.64%), Postives = 166/219 (75.80%), Query Frame = 3
Query:  117 KTNVVGTLNMLGLAKRVGARFLLTSTSEVYGDPLQHPQAETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGLGIEARIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVEGLIRLMEGDHVGPFNLGNPGEFTMLELAEVVQEIIDRNARIEFRPNTEDDPHKRKPDITKAKQLLGWEPRVTLRKGLPLMVADFRHRI 773
            KTN +GTLNMLGLAKRVGAR LL STSEVYGDP  HPQ+E YWG+VNPIG R+CYDEGKR AET+   Y +  G+E R+ARIFNT+GPRM ++DGRVVSNF+ QAL+ EPLTVYG G QTR+FQ+VSDLV GL+ LM  +   P NLGNP E T+LE A++++ ++   + I+F    +DDP KRKPDI KAK +LGWEP V L +GL   +  FR  +
Sbjct:  177 KTNTIGTLNMLGLAKRVGARLLLASTSEVYGDPEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVARIFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLVNGLVALMNSNVSSPVNLGNPEEHTILEFAQLIKNLVGSGSEIQFLSEAQDDPQKRKPDIKKAKLMLGWEPVVPLEEGLNKAIHYFRKEL 395          
BLAST of EY755959 vs. ExPASy Swiss-Prot
Match: UXS1_MOUSE (UDP-glucuronic acid decarboxylase 1 OS=Mus musculus GN=Uxs1 PE=2 SV=1)

HSP 1 Score: 282.337 bits (721), Expect = 2.461e-75
Identity = 135/219 (61.64%), Postives = 166/219 (75.80%), Query Frame = 3
Query:  117 KTNVVGTLNMLGLAKRVGARFLLTSTSEVYGDPLQHPQAETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGLGIEARIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVEGLIRLMEGDHVGPFNLGNPGEFTMLELAEVVQEIIDRNARIEFRPNTEDDPHKRKPDITKAKQLLGWEPRVTLRKGLPLMVADFRHRI 773
            KTN +GTLNMLGLAKRVGAR LL STSEVYGDP  HPQ+E YWG+VNPIG R+CYDEGKR AET+   Y +  G+E R+ARIFNT+GPRM ++DGRVVSNF+ QAL+ EPLTVYG G QTR+FQ+VSDLV GL+ LM  +   P NLGNP E T+LE A++++ ++   + I+F    +DDP KRKPDI KAK +LGWEP V L +GL   +  FR  +
Sbjct:  177 KTNTIGTLNMLGLAKRVGARLLLASTSEVYGDPEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVARIFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLVNGLVALMNSNVSSPVNLGNPEEHTILEFAQLIKNLVGSGSEIQFLSEAQDDPQKRKPDIKKAKLMLGWEPVVPLEEGLNKAIHYFRKEL 395          
BLAST of EY755959 vs. ExPASy Swiss-Prot
Match: UXS1_HUMAN (UDP-glucuronic acid decarboxylase 1 OS=Homo sapiens GN=UXS1 PE=1 SV=1)

HSP 1 Score: 282.337 bits (721), Expect = 2.461e-75
Identity = 135/219 (61.64%), Postives = 166/219 (75.80%), Query Frame = 3
Query:  117 KTNVVGTLNMLGLAKRVGARFLLTSTSEVYGDPLQHPQAETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGLGIEARIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVEGLIRLMEGDHVGPFNLGNPGEFTMLELAEVVQEIIDRNARIEFRPNTEDDPHKRKPDITKAKQLLGWEPRVTLRKGLPLMVADFRHRI 773
            KTN +GTLNMLGLAKRVGAR LL STSEVYGDP  HPQ+E YWG+VNPIG R+CYDEGKR AET+   Y +  G+E R+ARIFNT+GPRM ++DGRVVSNF+ QAL+ EPLTVYG G QTR+FQ+VSDLV GL+ LM  +   P NLGNP E T+LE A++++ ++   + I+F    +DDP KRKPDI KAK +LGWEP V L +GL   +  FR  +
Sbjct:  177 KTNTIGTLNMLGLAKRVGARLLLASTSEVYGDPEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVARIFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLVNGLVALMNSNVSSPVNLGNPEEHTILEFAQLIKNLVGSGSEIQFLSEAQDDPQKRKPDIKKAKLMLGWEPVVPLEEGLNKAIHYFRKEL 395          
BLAST of EY755959 vs. ExPASy Swiss-Prot
Match: UXS1_DANRE (UDP-glucuronic acid decarboxylase 1 OS=Danio rerio GN=uxs1 PE=2 SV=2)

HSP 1 Score: 274.633 bits (701), Expect = 5.131e-73
Identity = 132/219 (60.27%), Postives = 163/219 (74.43%), Query Frame = 3
Query:  117 KTNVVGTLNMLGLAKRVGARFLLTSTSEVYGDPLQHPQAETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGLGIEARIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVEGLIRLMEGDHVGPFNLGNPGEFTMLELAEVVQEIIDRNARIEFRPNTEDDPHKRKPDITKAKQLLGWEPRVTLRKGLPLMVADFRHRI 773
            KTN +GTLNMLGLAKRVGAR LL STSEVYGDP  HPQ E YWG+VNPIG R+CYDEGKR AET+   Y +  G+E R+ARIFNT+G RM ++DGRVVSNF+ QAL+ E LTVYG G QTR+FQ+VSDLV GL+ LM  +   P NLGNP E T+LE A++++ ++   + I+F P  +DDP +R+PDI KAK LLGWEP V L +GL   +  F   +
Sbjct:  175 KTNTIGTLNMLGLAKRVGARLLLASTSEVYGDPEVHPQNEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVARIFNTFGSRMHMNDGRVVSNFILQALQGEALTVYGSGSQTRAFQYVSDLVNGLVSLMNSNISSPVNLGNPEEHTILEFAQLIKSLVASRSHIQFLPEAQDDPQRRRPDIRKAKLLLGWEPVVPLEEGLNKTIQYFSREL 393          
BLAST of EY755959 vs. ExPASy Swiss-Prot
Match: UXS1_XENTR (UDP-glucuronic acid decarboxylase 1 OS=Xenopus tropicalis GN=uxs1 PE=2 SV=1)

HSP 1 Score: 274.248 bits (700), Expect = 6.701e-73
Identity = 131/219 (59.82%), Postives = 164/219 (74.89%), Query Frame = 3
Query:  117 KTNVVGTLNMLGLAKRVGARFLLTSTSEVYGDPLQHPQAETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGLGIEARIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVEGLIRLMEGDHVGPFNLGNPGEFTMLELAEVVQEIIDRNARIEFRPNTEDDPHKRKPDITKAKQLLGWEPRVTLRKGLPLMVADFRHRI 773
            KTN +GTLNMLGLAKRVGAR LL STSEVYGDP  HPQ+E YWG+VNPIG R+CYDEGKR AET+   Y +  G+E R+ARIFNT+GPRM ++DGRVVSNF+ QAL+ E LTVYG G+QTR+FQ+VSDLV GL+ LM  +   P NLGNP E ++++ A ++++++     I F    +DDP +RKPDI KAK LLGWEP V L +GL   +  FR  +
Sbjct:  178 KTNTIGTLNMLGLAKRVGARLLLASTSEVYGDPEVHPQSEEYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVARIFNTFGPRMHMNDGRVVSNFILQALQGEQLTVYGSGEQTRAFQYVSDLVNGLVALMNSNVSSPVNLGNPQEHSIVQFARLIKQLVGSGGEISFLSEAQDDPQRRKPDIRKAKLLLGWEPVVPLEEGLNKTIHYFRKEL 396          
BLAST of EY755959 vs. ExPASy Swiss-Prot
Match: YTCB_BACSU (Uncharacterized UDP-glucose epimerase ytcB OS=Bacillus subtilis GN=ytcB PE=3 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 4.122e-22
Identity = 63/195 (32.31%), Postives = 100/195 (51.28%), Query Frame = 3
Query:  177 FLLTSTSEVYGDPLQHPQAETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGLGIEARIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVEGLIRLMEGDHV--GPFNLGNPGEFTMLELAEVVQEIIDRNARIEFRPNTEDDPHKRKPDITKAKQLLGWEPRVTLRKGLPLMVA 755
            F+  STS VYG+        T    ++P GV       K T E L   Y +  GI   I R F  YGPR   D        + Q L+++PLT++GDG+Q+R F ++SD V+G+  ++   H+     N+G     ++L++  ++++I  R A + F      +P     DI+KAKQLL ++P  +L+ GL   +A
Sbjct:  121 FVFASTSSVYGEKQGKVSENTSLSPLSPYGVT------KLTGEKLCHVYKQSFGIPIVILRFFTVYGPRQRPD--MAFHRLIKQHLQQKPLTIFGDGQQSRDFTYISDCVKGITAVLGKPHLIGETVNIGGAERASVLKVVSLIEDISGRKATLHFSDKIAGEPSNTWADISKAKQLLHYDPATSLKDGLTNEIA 307          
BLAST of EY755959 vs. ExPASy Swiss-Prot
Match: RFBB_XANCB (dTDP-glucose 4,6-dehydratase OS=Xanthomonas campestris pv. campestris (strain B100) GN=rfbB PE=3 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 1.621e-18
Identity = 74/234 (31.62%), Postives = 109/234 (46.58%), Query Frame = 3
Query:  117 KTNVVGTLNMLGLAK----------RVGARFLLTSTSEVYGDPLQHPQAET-YWGNVNPIGVRSCYDEGKRTAETLTMDYHRGLGIEARIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVEGLIRLMEGDHVG-PFNLGNPGEFTMLELAEVVQEIIDRN-ARIEFRPN-------TEDDPHKRK--PDITKAKQLLGWEPRVTLRKGLPLMV 752
            +TNVVGTL +L   +          R   RFL  ST EVYG        ET  +    P    S Y   K  ++ L   +H   G+        N YGP    +  +++   +A+AL  EPL VYGDGKQ R + FVSD  E +  ++    VG  +N+G   E   +E+ + +  ++D++  R + +P        T+   H R+   D +K K  LGWEP  T  +G+ L V
Sbjct:   98 QTNVVGTLALLEAVRDYWKALPDTRRDAFRFLHVSTDEVYGT-----LGETGKFTETTPYAPNSPYSASKAASDHLVRAFHHTYGLPVLTTNCSNNYGPYHFPE--KLIPLVIAKALAGEPLPVYGDGKQVRDWLFVSDHCEAIRTVLAKGRVGETYNVGGNSERQNIEVVQAICALLDQHRPREDGKPRESQIAYVTDRPGHDRRYAIDASKLKDELGWEPAYTFEQGIALTV 324          
BLAST of EY755959 vs. ExPASy Swiss-Prot
Match: Y1055_METJA (Uncharacterized protein MJ1055 OS=Methanocaldococcus jannaschii GN=MJ1055 PE=3 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 2.117e-18
Identity = 64/210 (30.48%), Postives = 110/210 (52.38%), Query Frame = 3
Query:  117 KTNVVGTLNMLGLAKRVGA-RFLLTSTSEVYGDPLQHPQAETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGLGIEARIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVEGLIRLMEGDH-VGPFNLGNPGEFTMLELAEVVQEIIDRNARIEFRPNTEDDPHKRKPDITKAKQLLGWEPRVTLRKGL 740
            K+N +GTLN+   A+R    + +  S+S VYG   + P +E    +  PI   S Y   KR+ E +   YH   GI+    R F  YG     D       F    L  + + VY  G   R F ++SD+V+G++R ++ D     FNLGN     ++   E++++ +++ A+ +F P  + D  +   D++K+++LLG++P+VT+ +GL
Sbjct:  106 KSNEMGTLNIFEFARRFDIEKVVYASSSSVYGGNRKIPFSEDDRVD-KPI---SLYASTKRSNELMAHVYHHLYGIKMIGLRFFTVYGEYGRPD--MAYFKFAKNILLGKEIEVYNYGNMERDFTYISDVVDGILRAIKKDFDYEIFNLGNSKPVKLMYFIELIEKYLNKKAKKKFLPMQDGDVLRTYADLSKSEKLLGYKPKVTIEEGL 309          
BLAST of EY755959 vs. ExPASy Swiss-Prot
Match: GME1_ORYSJ (GDP-mannose 3,5-epimerase 1 OS=Oryza sativa subsp. japonica GN=GME-1 PE=1 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 4.717e-18
Identity = 68/211 (32.23%), Postives = 98/211 (46.45%), Query Frame = 3
Query:  123 NVVGTLNMLGLAKRVGA-RFLLTSTSEVYGDPLQ-HPQAETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGLGIEARIARIFNTYGPRMCIDDGR--VVSNFVAQALRK-EPLTVYGDGKQTRSFQFVSDLVEGLIRLMEGDHVGPFNLGNPGEFTMLELAEVVQEIIDRNARIEFRPNTEDDPHKRKPDITKAKQLLGWEPRVTLRKGL 740
            N + + NML  A+  G  RF   S++ +Y +  Q          +  P   +  Y   K   E L   Y +  GIE R+ R  N YGP      GR    + F  +A    +   ++GDG QTRSF F+ + VEG++RL + D   P N+G+    +M E+AE++    DR   I   P  E     R  D T  K+ LGW P + L+ GL
Sbjct:  121 NTMISFNMLEAARINGVKRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLATEELCKHYTKDFGIECRVGRFHNIYGPFGTWKGGREKAPAAFCRKAQTSTDRFEMWGDGLQTRSFTFIDECVEGVLRLTKSDFREPVNIGSDEMVSMNEMAEIILSFEDRELPIHHIPGPE-GVRGRNSDNTLIKEKLGWAPTMKLKDGL 330          
The following BLAST results are available for this feature:
BLAST of EY755959 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 38
Match NameE-valueIdentityDescription
UXS1_RAT2.461e-7561.64UDP-glucuronic acid decarboxylase 1 OS=Rattus norv... [more]
UXS1_PONAB2.461e-7561.64UDP-glucuronic acid decarboxylase 1 OS=Pongo abeli... [more]
UXS1_MOUSE2.461e-7561.64UDP-glucuronic acid decarboxylase 1 OS=Mus musculu... [more]
UXS1_HUMAN2.461e-7561.64UDP-glucuronic acid decarboxylase 1 OS=Homo sapien... [more]
UXS1_DANRE5.131e-7360.27UDP-glucuronic acid decarboxylase 1 OS=Danio rerio... [more]
UXS1_XENTR6.701e-7359.82UDP-glucuronic acid decarboxylase 1 OS=Xenopus tro... [more]
YTCB_BACSU4.122e-2232.31Uncharacterized UDP-glucose epimerase ytcB OS=Baci... [more]
RFBB_XANCB1.621e-1831.62dTDP-glucose 4,6-dehydratase OS=Xanthomonas campes... [more]
Y1055_METJA2.117e-1830.48Uncharacterized protein MJ1055 OS=Methanocaldococc... [more]
GME1_ORYSJ4.717e-1832.23GDP-mannose 3,5-epimerase 1 OS=Oryza sativa subsp.... [more]

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Properties
Property NameValue
Genbank descriptionCS13-C1-001-001-H11-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY755959 ID=EY755959; Name=EY755959; organism=Citrus sinensis; type=EST; length=889bp
CCCGCGTCCGAATTAAATTTACTTAATTTGTTTATTATTTTTGTTGAAAC
CTGTTGTTAATTTGTTTGAAGTTTGAATTCCTTTGACTGTTATTTTTGCG
TGCGGTGGGGGTGAACAAGACGAACGTGGTGGGGACACTCAACATGTTAG
GGCTAGCTAAAAGAGTTGGGGCACGGTTCTTGTTAACAAGCACTAGTGAA
GTGTACGGTGACCCGTTACAGCATCCGCAGGCCGAGACCTACTGGGGCAA
TGTCAACCCTATCGGTGTAAGAAGCTGTTATGATGAGGGCAAGCGCACAG
CAGAGACCTTGACCATGGACTATCATCGAGGACTTGGAATTGAGGCGAGG
ATTGCTAGGATTTTTAACACTTATGGACCACGAATGTGCATTGATGATGG
TCGTGTTGTGAGCAACTTTGTCGCCCAAGCGTTGAGGAAGGAGCCATTGA
CTGTTTATGGCGATGGAAAACAGACTAGAAGTTTCCAATTCGTTTCAGAC
CTGGTTGAGGGCCTAATAAGGCTAATGGAGGGCGATCATGTCGGTCCTTT
TAACCTCGGCAATCCTGGTGAATTCACCATGCTTGAACTAGCTGAGGTTG
TCCAAGAGATAATAGACCGAAATGCAAGGATAGAGTTCAGGCCAAACACA
GAGGATGATCCACATAAAAGGAAGCCAGACATTACAAAGGCTAAACAGCT
TCTTGGGTGGGAGCCAAGAGTGACCCTCCGGAAGGGGCTTCCTCTCATGG
TTGCCGACTTCCGGCATCGAATTTTTGGTGACCAAAAGAANCNNTGTGTG
NTGNTGGAAGAAGTGATGCCACTTCTTTCTCGATGTACTCTGCTAACTAA
ATTCCCNATGAGTGNTGGGAAAACTGNAGATATATTAAT
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