EY755923

Overview
NameEY755923
Unique NameEY755923
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length756
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY755923 vs. ExPASy Swiss-Prot
Match: P4HA1_CHICK (Prolyl 4-hydroxylase subunit alpha-1 OS=Gallus gallus GN=P4HA1 PE=1 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.033e-12
Identity = 39/117 (33.33%), Postives = 62/117 (52.99%), Query Frame = 1
Query:   22 KYDSHYD--------AFNPAEYGPQMSQRLASFLLYLSDVEEGGETMFPFENGIFLDSGYDYKKCIGLKVKPRRGDGLLFYSLFPNGTIDRTSLHGSCPVIKGEKWVATKWIRDQEQ 348
            +Y+ H+D        AF     G     R+A++L Y+SDV  GG T+FP                +G  V P++G  + +Y+LFP+G  D ++ H +CPV+ G KWV+ KW+ ++ Q
Sbjct:  407 QYEPHFDFGRKDEPDAFKELGTG----NRIATWLFYMSDVSAGGATVFPE---------------VGASVWPKKGTAVFWYNLFPSGEGDYSTRHAACPVLVGNKWVSNKWLHERGQ 504          
BLAST of EY755923 vs. ExPASy Swiss-Prot
Match: P4HA1_RAT (Prolyl 4-hydroxylase subunit alpha-1 OS=Rattus norvegicus GN=P4ha1 PE=2 SV=2)

HSP 1 Score: 70.8626 bits (172), Expect = 8.749e-12
Identity = 38/117 (32.48%), Postives = 61/117 (52.14%), Query Frame = 1
Query:   22 KYDSHYD--------AFNPAEYGPQMSQRLASFLLYLSDVEEGGETMFPFENGIFLDSGYDYKKCIGLKVKPRRGDGLLFYSLFPNGTIDRTSLHGSCPVIKGEKWVATKWIRDQEQ 348
            +Y+ H+D        AF     G     R+A++L Y+SDV  GG T+FP                +G  V P++G  + +Y+LF +G  D ++ H +CPV+ G KWV+ KW+ ++ Q
Sbjct:  425 QYEPHFDFARKDEPDAFRELGTG----NRIATWLFYMSDVSAGGATVFPE---------------VGASVWPKKGTAVFWYNLFASGEGDYSTRHAACPVLVGNKWVSNKWLHERGQ 522          
BLAST of EY755923 vs. ExPASy Swiss-Prot
Match: P4HA1_PONAB (Prolyl 4-hydroxylase subunit alpha-1 OS=Pongo abelii GN=P4HA1 PE=2 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 8.749e-12
Identity = 38/117 (32.48%), Postives = 61/117 (52.14%), Query Frame = 1
Query:   22 KYDSHYD--------AFNPAEYGPQMSQRLASFLLYLSDVEEGGETMFPFENGIFLDSGYDYKKCIGLKVKPRRGDGLLFYSLFPNGTIDRTSLHGSCPVIKGEKWVATKWIRDQEQ 348
            +Y+ H+D        AF     G     R+A++L Y+SDV  GG T+FP                +G  V P++G  + +Y+LF +G  D ++ H +CPV+ G KWV+ KW+ ++ Q
Sbjct:  425 QYEPHFDFARKDEPDAFKELGTG----NRIATWLFYMSDVSAGGATVFPE---------------VGASVWPKKGTAVFWYNLFASGEGDYSTRHAACPVLVGNKWVSNKWLHERGQ 522          
BLAST of EY755923 vs. ExPASy Swiss-Prot
Match: P4HA1_MOUSE (Prolyl 4-hydroxylase subunit alpha-1 OS=Mus musculus GN=P4ha1 PE=2 SV=2)

HSP 1 Score: 70.8626 bits (172), Expect = 8.749e-12
Identity = 38/117 (32.48%), Postives = 61/117 (52.14%), Query Frame = 1
Query:   22 KYDSHYD--------AFNPAEYGPQMSQRLASFLLYLSDVEEGGETMFPFENGIFLDSGYDYKKCIGLKVKPRRGDGLLFYSLFPNGTIDRTSLHGSCPVIKGEKWVATKWIRDQEQ 348
            +Y+ H+D        AF     G     R+A++L Y+SDV  GG T+FP                +G  V P++G  + +Y+LF +G  D ++ H +CPV+ G KWV+ KW+ ++ Q
Sbjct:  425 QYEPHFDFARKDEPDAFRELGTG----NRIATWLFYMSDVSAGGATVFPE---------------VGASVWPKKGTAVFWYNLFASGEGDYSTRHAACPVLVGNKWVSNKWLHERGQ 522          
BLAST of EY755923 vs. ExPASy Swiss-Prot
Match: P4HA1_HUMAN (Prolyl 4-hydroxylase subunit alpha-1 OS=Homo sapiens GN=P4HA1 PE=1 SV=2)

HSP 1 Score: 70.8626 bits (172), Expect = 8.749e-12
Identity = 38/117 (32.48%), Postives = 61/117 (52.14%), Query Frame = 1
Query:   22 KYDSHYD--------AFNPAEYGPQMSQRLASFLLYLSDVEEGGETMFPFENGIFLDSGYDYKKCIGLKVKPRRGDGLLFYSLFPNGTIDRTSLHGSCPVIKGEKWVATKWIRDQEQ 348
            +Y+ H+D        AF     G     R+A++L Y+SDV  GG T+FP                +G  V P++G  + +Y+LF +G  D ++ H +CPV+ G KWV+ KW+ ++ Q
Sbjct:  425 QYEPHFDFARKDEPDAFKELGTG----NRIATWLFYMSDVSAGGATVFPE---------------VGASVWPKKGTAVFWYNLFASGEGDYSTRHAACPVLVGNKWVSNKWLHERGQ 522          
BLAST of EY755923 vs. ExPASy Swiss-Prot
Match: P4HA1_BOVIN (Prolyl 4-hydroxylase subunit alpha-1 OS=Bos taurus GN=P4HA1 PE=1 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.949e-11
Identity = 38/117 (32.48%), Postives = 61/117 (52.14%), Query Frame = 1
Query:   22 KYDSHYD--------AFNPAEYGPQMSQRLASFLLYLSDVEEGGETMFPFENGIFLDSGYDYKKCIGLKVKPRRGDGLLFYSLFPNGTIDRTSLHGSCPVIKGEKWVATKWIRDQEQ 348
            +Y+ H+D        AF     G     R+A++L Y+SDV  GG T+FP                +G  V P++G  + +Y+LF +G  D ++ H +CPV+ G KWV+ KW+ ++ Q
Sbjct:  425 QYEPHFDFARKDEPDAFKELGTG----NRIATWLFYMSDVLAGGATVFPE---------------VGASVWPKKGTAVFWYNLFASGEGDYSTRHAACPVLVGNKWVSNKWLHERGQ 522          
BLAST of EY755923 vs. ExPASy Swiss-Prot
Match: P4HA2_CHICK (Prolyl 4-hydroxylase subunit alpha-2 OS=Gallus gallus GN=P4HA2 PE=2 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 2.545e-11
Identity = 38/110 (34.55%), Postives = 61/110 (55.45%), Query Frame = 1
Query:   22 KYDSHYDAFNPAEYGPQMSQ---RLASFLLYLSDVEEGGETMFPFENGIFLDSGYDYKKCIGLKVKPRRGDGLLFYSLFPNGTIDRTSLHGSCPVIKGEKWVATKWIRDQ 342
            +Y+ H+D F+   +   +     RLA+FL Y+SDVE GG T+FP           D+    G  + P++G  + +Y+LF +G  D  + H +CPV+ G KWV+ KW  ++
Sbjct:  427 QYEPHFD-FSRRPFDSTLKSEGNRLATFLNYMSDVEAGGATVFP-----------DF----GAAIWPKKGTAVFWYNLFRSGEGDYRTRHAACPVLVGCKWVSNKWFHER 520          
BLAST of EY755923 vs. ExPASy Swiss-Prot
Match: P4HA3_HUMAN (Prolyl 4-hydroxylase subunit alpha-3 OS=Homo sapiens GN=P4HA3 PE=1 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 3.324e-11
Identity = 40/111 (36.04%), Postives = 58/111 (52.25%), Query Frame = 1
Query:   25 YDSHYD-AFNPAE--YGPQMSQRLASFLLYLSDVEEGGETMFPFENGIFLDSGYDYKKCIGLKVKPRRGDGLLFYSLFPNGTIDRTSLHGSCPVIKGEKWVATKWIRDQEQ 348
            Y+ H+D A +P+   Y  +   R+A+F++YLS VE GG T F + N               L V   R   L +++L  +G  D  +LH  CPV+ G+KWVA KWI +  Q
Sbjct:  437 YEPHFDHATSPSSPLYRMKSGNRVATFMIYLSSVEAGGATAFIYAN---------------LSVPVVRNAALFWWNLHRSGEGDSDTLHAGCPVLVGDKWVANKWIHEYGQ 532          
The following BLAST results are available for this feature:
BLAST of EY755923 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 8
Match NameE-valueIdentityDescription
P4HA1_CHICK1.033e-1233.33Prolyl 4-hydroxylase subunit alpha-1 OS=Gallus gal... [more]
P4HA1_RAT8.749e-1232.48Prolyl 4-hydroxylase subunit alpha-1 OS=Rattus nor... [more]
P4HA1_PONAB8.749e-1232.48Prolyl 4-hydroxylase subunit alpha-1 OS=Pongo abel... [more]
P4HA1_MOUSE8.749e-1232.48Prolyl 4-hydroxylase subunit alpha-1 OS=Mus muscul... [more]
P4HA1_HUMAN8.749e-1232.48Prolyl 4-hydroxylase subunit alpha-1 OS=Homo sapie... [more]
P4HA1_BOVIN1.949e-1132.48Prolyl 4-hydroxylase subunit alpha-1 OS=Bos taurus... [more]
P4HA2_CHICK2.545e-1134.55Prolyl 4-hydroxylase subunit alpha-2 OS=Gallus gal... [more]
P4HA3_HUMAN3.324e-1136.04Prolyl 4-hydroxylase subunit alpha-3 OS=Homo sapie... [more]
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Properties
Property NameValue
Genbank descriptionCS13-C1-001-001-E03-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY755923 ID=EY755923; Name=EY755923; organism=Citrus sinensis; type=EST; length=756bp
TCCGTCGACCCACGCGTCCGGAAATATGATTCTCACTATGATGCATTCAA
CCCAGCTGAATATGGCCCACAAATGAGCCAAAGGTTGGCTTCCTTCTTGT
TGTATCTGTCTGATGTTGAGGAAGGTGGAGAAACCATGTTCCCATTTGAG
AATGGCATATTTCTAGATTCGGGCTATGATTACAAAAAATGCATTGGTTT
AAAAGTGAAGCCACGGAGAGGAGATGGACTGCTATTTTATTCATTGTTTC
CAAATGGCACAATTGATCGGACATCACTTCACGGAAGCTGTCCGGTGATC
AAAGGGGAGAAATGGGTTGCTACAAAGTGGATTAGAGATCAAGAACAACA
CGAGGACTAATTGTGGTGGCTACTAAGTGGATTAGAGATGAAGAGCAAGT
GGACTAAGTATGACTACCATGCCAACCCTCTTTCATCTTTATGGTTAGAT
GCCGTAGTGTATAAGTTTCATGGCTGAAGATTGAGTTACAGAAGAGAAGG
AACAGCCAATTTCACGTGTTTATCGTTGCGGTTACCATATTACTTAGTTT
CTTTCCAGTTTCTAAAAAATAGTGTCTCATTTTATTTGGGGGTATTTCAG
GACACTCATGGATGTATATCATTTATNGTAGAAAAATGTCAAGAAGAAGA
AATATTNGATCGTGTAAAGTAACAACTCTTATCAGAACTACTTTCTGCCC
CTCTTACTCNTAGGAGCAGNATGAAATATGTTTAATTTGCAAAAAAAAAA
AAAAGA
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