EY755920
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY755920 vs. ExPASy Swiss-Prot
Match: GYRB_NICBE (DNA gyrase subunit B, chloroplastic/mitochondrial OS=Nicotiana benthamiana GN=GYRB PE=2 SV=1) HSP 1 Score: 175.252 bits (443), Expect = 4.260e-43 Identity = 86/149 (57.72%), Postives = 110/149 (73.83%), Query Frame = 3 Query: 24 GLGEMGEDFMIQALRYHQILTSTDADGYGAHILTLMLTFFYKYQNTLFDDCWIYVCVPPLYKDDKGKLVQGCYDDAQLNNVHSSFPSHALNSIQRLSGLRYMMPVRMW*TTLNPQIRMLRQLAIDDATQTHVVFSSLMGAMADTLKGLI 470 GLG GEDF +ALRYH+I+ TDAD GAHI TL+LTFF++YQ LF++ IYV VPPLYK ++GK V CYDDA+L V SFPS+A +IQR GL MMP ++W TT+NP+ R+L+QL ++DA + +VVFSSLMG+ D K LI Sbjct: 569 GLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFFRYQRALFEEGCIYVGVPPLYKVERGKQVYYCYDDAELKKVQRSFPSNASYNIQRFKGLGEMMPAQLWETTMNPETRLLKQLVVEDAAEANVVFSSLMGSRVDIRKQLI 717
BLAST of EY755920 vs. ExPASy Swiss-Prot
Match: GYRB_ORYSJ (DNA gyrase subunit B, chloroplastic/mitochondrial OS=Oryza sativa subsp. japonica GN=GYRB PE=2 SV=1) HSP 1 Score: 170.629 bits (431), Expect = 1.049e-41 Identity = 86/163 (52.76%), Postives = 111/163 (68.10%), Query Frame = 3 Query: 24 GLGEMGEDFMIQALRYHQILTSTDADGYGAHILTLMLTFFYKYQNTLFDDCWIYVCVPPLYKDDKGKLVQGCYDDAQLNNVHSSFPSHALNSIQRLSGLRYMMPVRMW*TTLNPQIRMLRQLAIDDATQTHVVFSSLMGAMADTLKGLIXXXXXXXXXXHLEI 512 GLG GEDF +ALRYH+I+ TDAD GAHI TL+LTFF++YQ LFD+ IYV VPPLYK ++GK CYDDA L + ++FP++A IQR GL MMP ++W TT++P+ RML+QL ++DA + +VVFSSLMG D K LI HL+I Sbjct: 567 GLGVKGEDFNKEALRYHKIVILTDADVDGAHIRTLLLTFFFRYQKALFDEGCIYVGVPPLYKVERGKQAHYCYDDADLKELVNTFPTNASYHIQRFKGLGEMMPAQLWETTMDPERRMLKQLKVEDAAEANVVFSSLMGTRVDVRKQLIQNAASMVNLEHLDI 729
BLAST of EY755920 vs. ExPASy Swiss-Prot
Match: GYRBP_ARATH (DNA gyrase subunit B, chloroplastic OS=Arabidopsis thaliana GN=GYRBC PE=2 SV=2) HSP 1 Score: 169.859 bits (429), Expect = 1.790e-41 Identity = 86/163 (52.76%), Postives = 110/163 (67.48%), Query Frame = 3 Query: 24 GLGEMGEDFMIQALRYHQILTSTDADGYGAHILTLMLTFFYKYQNTLFDDCWIYVCVPPLYKDDKGKLVQGCYDDAQLNNVHSSFPSHALNSIQRLSGLRYMMPVRMW*TTLNPQIRMLRQLAIDDATQTHVVFSSLMGAMADTLKGLIXXXXXXXXXXHLEI 512 GLG GEDF + LRYH+I+ TDAD GAHI TL+LTFF++YQ LFD IYV VPPL+K ++GK CYDDA L + +SFP +A +IQR GL MMP ++W TT+NP R+L+QL +DDA +T++VFSSLMGA D K LI +L+I Sbjct: 499 GLGVKGEDFNKENLRYHKIIILTDADVDGAHIRTLLLTFFFRYQRALFDAGCIYVGVPPLFKVERGKQAHYCYDDAALKKITASFPGNASYNIQRFKGLGEMMPAQLWETTMNPDTRILKQLVVDDAAETNMVFSSLMGARVDVRKELIKSAATRMNLENLDI 661
BLAST of EY755920 vs. ExPASy Swiss-Prot
Match: GYRBM_ARATH (DNA gyrase subunit B, mitochondrial OS=Arabidopsis thaliana GN=GYRBM PE=2 SV=1) HSP 1 Score: 166.777 bits (421), Expect = 1.515e-40 Identity = 82/149 (55.03%), Postives = 106/149 (71.14%), Query Frame = 3 Query: 24 GLGEMGEDFMIQALRYHQILTSTDADGYGAHILTLMLTFFYKYQNTLFDDCWIYVCVPPLYKDDKGKLVQGCYDDAQLNNVHSSFPSHALNSIQRLSGLRYMMPVRMW*TTLNPQIRMLRQLAIDDATQTHVVFSSLMGAMADTLKGLI 470 GLG GEDF + LRYH+I+ TDAD GAHI TL+LTFF++YQ LFD IYV VPPL+K ++GK Q CYDDA L + S+FP++A +IQR GL MMP ++W TT+NP+ R+L+QL +DD + ++ FSSLMGA D K LI Sbjct: 570 GLGVKGEDFKKENLRYHKIIILTDADVDGAHIRTLLLTFFFRYQRALFDAGCIYVGVPPLFKVERGKNAQYCYDDADLKKITSNFPANASYNIQRFKGLGEMMPEQLWETTMNPETRILKQLVVDDIAEANMTFSSLMGARVDVRKELI 718
BLAST of EY755920 vs. ExPASy Swiss-Prot
Match: GYRB_SYNY3 (DNA gyrase subunit B OS=Synechocystis sp. (strain PCC 6803) GN=gyrB PE=3 SV=1) HSP 1 Score: 140.198 bits (352), Expect = 1.519e-32 Identity = 68/139 (48.92%), Postives = 94/139 (67.63%), Query Frame = 3 Query: 24 GLGEMGEDFMIQALRYHQILTSTDADGYGAHILTLMLTFFYKYQNTLFDDCWIYVCVPPLYKDDKGKLVQGCYDDAQLNNVHSSFPSHALNSIQRLSGLRYMMPVRMW*TTLNPQIRMLRQLAIDDATQTHVVFSSLMG 440 GLG G+DF I +LRYH+++ TDAD GAHI TL+LTFFY+YQ L D +IY+ PPLYK ++GK CY D +L S FP +A +IQR GL MMP ++W TT+NP+ R ++++ I+DA + +F+ LMG Sbjct: 916 GLGIKGDDFDISSLRYHRVVIMTDADVDGAHIRTLLLTFFYRYQRDLVDQGYIYIACPPLYKLERGKNHFYCYSDRELQEQISQFPPNANYTIQRFKGLGEMMPQQLWDTTMNPESRTMKRVHIEDAAEADRIFTVLMG 1054
BLAST of EY755920 vs. ExPASy Swiss-Prot
Match: GYRB_BACHD (DNA gyrase subunit B OS=Bacillus halodurans GN=gyrB PE=3 SV=1) HSP 1 Score: 125.176 bits (313), Expect = 5.056e-28 Identity = 64/156 (41.03%), Postives = 93/156 (59.62%), Query Frame = 3 Query: 6 VRIRVPGLGE-MGEDFMIQALRYHQILTSTDADGYGAHILTLMLTFFYKYQNTLFDDCWIYVCVPPLYKDDKGKLVQGCYDDAQLNNVHSSFPSHALNSIQRLSGLRYMMPVRMW*TTLNPQIRMLRQLAIDDATQTHVVFSSLMGAMADTLKGLI 470 +R + LG +G+DF I+ RYH+I+ TDAD GAHI TL+LTFFY+Y L + ++Y+ PPLYK +GK +Q Y DA+L + S P A IQR GL M P ++W TT++P R + Q+ ++DA + +F LMG + + I Sbjct: 470 IRAIITALGTGIGDDFDIEKARYHKIIIMTDADVDGAHIRTLILTFFYRYMRPLIEHGYVYIAQPPLYKVQQGKDIQYAYGDAELQEILSQLPDKAKPGIQRYKGLGEMNPSQLWETTMDPGQRTVLQVTLEDAMKADEIFEILMGDRVEPRRDFI 625
BLAST of EY755920 vs. ExPASy Swiss-Prot
Match: GYRB_BACAN (DNA gyrase subunit B OS=Bacillus anthracis GN=gyrB PE=3 SV=2) HSP 1 Score: 122.479 bits (306), Expect = 3.277e-27 Identity = 59/156 (37.82%), Postives = 93/156 (59.62%), Query Frame = 3 Query: 6 VRIRVPGLG-EMGEDFMIQALRYHQILTSTDADGYGAHILTLMLTFFYKYQNTLFDDCWIYVCVPPLYKDDKGKLVQGCYDDAQLNNVHSSFPSHALNSIQRLSGLRYMMPVRMW*TTLNPQIRMLRQLAIDDATQTHVVFSSLMGAMADTLKGLI 470 VR + +G +G DF I+ RYH+++ TDAD GAHI TL+LTFFY+Y + + +IY+ PPL+K +GK +Q Y++ +L + + P+ IQR GL M P ++W TT++P++R L Q+++ DA + F LMG + + I Sbjct: 473 VRTIITAIGTNIGGDFDIEKARYHKVIIMTDADVDGAHIRTLLLTFFYRYMRQIIEHGYIYIAQPPLFKVQQGKKIQYAYNEKELEKILAELPAQPKPGIQRYKGLGEMNPTQLWETTMDPEVRSLLQVSLQDAIEADETFEILMGDKVEPRRNFI 628
BLAST of EY755920 vs. ExPASy Swiss-Prot
Match: GYRB_BACSU (DNA gyrase subunit B OS=Bacillus subtilis GN=gyrB PE=3 SV=1) HSP 1 Score: 119.398 bits (298), Expect = 2.774e-26 Identity = 59/156 (37.82%), Postives = 90/156 (57.69%), Query Frame = 3 Query: 6 VRIRVPGLGE-MGEDFMIQALRYHQILTSTDADGYGAHILTLMLTFFYKYQNTLFDDCWIYVCVPPLYKDDKGKLVQGCYDDAQLNNVHSSFPSHALNSIQRLSGLRYMMPVRMW*TTLNPQIRMLRQLAIDDATQTHVVFSSLMGAMADTLKGLI 470 VR + LG +GEDF ++ RYH+++ TDAD GAHI TL+LTFFY+Y + ++ ++Y+ PPLYK +GK V+ Y+D +L + + P +QR GL M ++W TT++P R L Q+ ++DA F LMG + + I Sbjct: 471 VRSMITALGTGIGEDFNLEKARYHKVVIMTDADVDGAHIRTLLLTFFYRYMRQIIENGYVYIAQPPLYKVQQGKRVEYAYNDKELEELLKTLPQTPKPGLQRYKGLGEMNATQLWETTMDPSSRTLLQVTLEDAMDADETFEMLMGDKVEPRRNFI 626
BLAST of EY755920 vs. ExPASy Swiss-Prot
Match: GYRB_MYCHP (DNA gyrase subunit B OS=Mycoplasma hominis (strain ATCC 23114 / IFO 14850 / NCTC 10111 / PG21) GN=gyrB PE=3 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 1.988e-24 Identity = 57/132 (43.18%), Postives = 81/132 (61.36%), Query Frame = 3 Query: 45 DFMIQALRYHQILTSTDADGYGAHILTLMLTFFYKYQNTLFDDCWIYVCVPPLYKDDKGKLVQGCYDDAQLNNVHSSFPSHALNSIQRLSGLRYMMPVRMW*TTLNPQIRMLRQLAIDDATQTHVVFSSLMG 440 +F I L+YH+I+ TDAD GAHI TL+LTFFY+Y L + ++Y+ PPLYK GK V+ Y+D Q + + +IQR GL M P ++W TT++P+ R + Q+ IDDA VF++LMG Sbjct: 495 EFDINKLKYHKIIIMTDADVDGAHITTLLLTFFYRYMKPLIEYGFVYLAQPPLYKITSGKNVEYAYNDLQKEQIMAKLEDKRNVAIQRYKGLGEMDPEQLWETTMDPETRKMLQVQIDDAAICDTVFATLMG 626
BLAST of EY755920 vs. ExPASy Swiss-Prot
Match: GYRB_CLOAB (DNA gyrase subunit B OS=Clostridium acetobutylicum GN=gyrB PE=3 SV=2) HSP 1 Score: 110.538 bits (275), Expect = 1.289e-23 Identity = 60/148 (40.54%), Postives = 85/148 (57.43%), Query Frame = 3 Query: 30 GEMGEDFMIQALRYHQILTSTDADGYGAHILTLMLTFFYKYQNTLFDDCWIYVCVPPLYKDDKGKLVQGCYDDAQLNNVHSSFPSHALNS-IQRLSGLRYMMPVRMW*TTLNPQIRMLRQLAIDDATQTHVVFSSLMGAMADTLKGLI 470 G +G+DF + LRYH+I+ TDAD GAHI TL+LTFFY+Y L + +++ PPLYK K + Y D +L +V N+ IQR GL M P ++W TT+NP+ R L ++ I+DA +F+ LMG D + I Sbjct: 478 GGIGKDFDVSKLRYHKIIIMTDADVDGAHIRTLILTFFYRYMTELISEGHVFIAQPPLYKVTKTRKEYYAYSDKELEDVLQDVGGKDKNTDIQRYKGLGEMNPEQLWETTMNPEQRTLIKVNIEDAMAADEIFTILMGDKVDPRRKFI 625 The following BLAST results are available for this feature:
BLAST of EY755920 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 84
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >EY755920 ID=EY755920; Name=EY755920; organism=Citrus sinensis; type=EST; length=892bpback to top |