EY755916

Overview
NameEY755916
Unique NameEY755916
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length716
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1625 contig Csv1_Contig1625:539..1255. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY755916 vs. ExPASy Swiss-Prot
Match: Y2766_ARATH (Uncharacterized protein At2g37660, chloroplastic OS=Arabidopsis thaliana GN=At2g37660 PE=1 SV=2)

HSP 1 Score: 361.688 bits (927), Expect = 2.230e-99
Identity = 174/199 (87.44%), Postives = 190/199 (95.48%), Query Frame = 2
Query:   23 GDISDSNSIIPAIQGIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAGAKQIVLVGSMGGTNLNHPLNSLGNGNILVWKRKAEQYLADSGIPYTIIRAGGLQDKEGGIRELLVGKDDELLQTETRTIARADVAEVCIQALQFEEAKFKAFDLASKPEGTGTPTKDFKALFSQITTHF 619
            GDI D+ SI PA++GIDAL+ILTSAVP+MKP FDP+KGGRPEF+F++GAYPEQVDWIGQKNQIDAAKAAG KQIVLVGSMGGTN+NHPLNS+GN NILVWKRKAEQYLADSGIPYTIIRAGGLQDK+GGIRELLVGKDDELL+TETRTIARADVAEVC+QALQ EEAKFKA DLASKPEGTGTPTKDFKALF+Q+TT F
Sbjct:  127 GDIRDTASIAPAVEGIDALVILTSAVPQMKPGFDPSKGGRPEFFFDDGAYPEQVDWIGQKNQIDAAKAAGVKQIVLVGSMGGTNINHPLNSIGNANILVWKRKAEQYLADSGIPYTIIRAGGLQDKDGGIRELLVGKDDELLETETRTIARADVAEVCVQALQLEEAKFKALDLASKPEGTGTPTKDFKALFTQVTTKF 325          
BLAST of EY755916 vs. ExPASy Swiss-Prot
Match: Y5224_ARATH (Uncharacterized protein At5g02240 OS=Arabidopsis thaliana GN=At5g02240 PE=1 SV=1)

HSP 1 Score: 342.428 bits (877), Expect = 1.400e-93
Identity = 167/199 (83.92%), Postives = 180/199 (90.45%), Query Frame = 2
Query:   23 GDISDSNSIIPAIQGIDALIILTSAVPKMKPDFDPAKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAGAKQIVLVGSMGGTNLNHPLNSLGNGNILVWKRKAEQYLADSGIPYTIIRAGGLQDKEGGIRELLVGKDDELLQTETRTIARADVAEVCIQALQFEEAKFKAFDLASKPEGTGTPTKDFKALFSQITTHF 619
            GDI+D++SI PA QGIDAL+ILTSAVPKMKP FDP KGGRPEF FE+G YPEQVDWIGQKNQIDAAK AG K IV+VGSMGGTN +HPLN LGNGNILVWKRKAEQYLADSG PYTIIRAGGL DKEGG+RELLVGKDDELLQT+T+T+ RADVAEVCIQAL FEEAK KAFDL SKPEGT TPTKDFKALFSQ+T+ F
Sbjct:   55 GDITDADSINPAFQGIDALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVAGVKHIVVVGSMGGTNPDHPLNKLGNGNILVWKRKAEQYLADSGTPYTIIRAGGLLDKEGGVRELLVGKDDELLQTDTKTVPRADVAEVCIQALLFEEAKNKAFDLGSKPEGTSTPTKDFKALFSQVTSRF 253          
BLAST of EY755916 vs. ExPASy Swiss-Prot
Match: Y2446_ARATH (Uncharacterized protein At2g34460, chloroplastic OS=Arabidopsis thaliana GN=At2g34460 PE=1 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.341e-11
Identity = 56/167 (33.53%), Postives = 89/167 (53.29%), Query Frame = 2
Query:  128 AKGGRPEFYFEEGAYPEQVDWIGQKNQIDAAKAAGAKQIVLVGSM--GGTNLNHPLNSLGN-----GNILVWKRKAEQYLADSGIPYTIIRAGGLQDKEGGIRELLVGKDDELLQTETRTIARADVAEVCIQALQFEEAKFKAFDLASKPEGTGTPTKDFKALFSQI 607
            A G RP F   +   P +VD  G  N +DA +  G ++ VLV S+   G  +   LN         G  LV K +AE+Y+  SGI YTI+R GGL++ +     +++  +D L +    +I+R  VAEV ++AL  EE+ FK  ++ ++ E    P + +K LF+ +
Sbjct:  121 ATGFRPGF---DIFTPWKVDNFGTVNLVDACRKQGVEKFVLVSSILVNGAAMGQILNPAYLFLNLFGLTLVAKLQAEKYIKKSGINYTIVRPGGLKN-DPPTGNVVMEPEDTLYE---GSISRDLVAEVAVEALLQEESSFKVVEIVARAE---APKRSYKDLFASV 277          
The following BLAST results are available for this feature:
BLAST of EY755916 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 3
Match NameE-valueIdentityDescription
Y2766_ARATH2.230e-9987.44Uncharacterized protein At2g37660, chloroplastic O... [more]
Y5224_ARATH1.400e-9383.92Uncharacterized protein At5g02240 OS=Arabidopsis t... [more]
Y2446_ARATH1.341e-1133.53Uncharacterized protein At2g34460, chloroplastic O... [more]
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Properties
Property NameValue
Genbank descriptionCS13-C1-001-001-D06-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY755916 ID=EY755916; Name=EY755916; organism=Citrus sinensis; type=EST; length=716bp
TTTCGGTCGACCCACGCGTCCGGGTGACATTAGCGACTCTAATAGCATCA
TTCCTGCAATCCAAGGAATCGATGCTCTCATAATTCTCACAAGTGCAGTA
CCAAAGATGAAACCTGATTTTGATCCTGCCAAAGGTGGAAGGCCTGAGTT
CTACTTTGAAGAGGGTGCATATCCTGAACAGGTTGATTGGATTGGTCAGA
AAAATCAAATTGATGCTGCTAAGGCTGCTGGAGCGAAGCAAATTGTGTTG
GTTGGATCGATGGGAGGAACAAATCTTAATCATCCCTTGAACAGTTTGGG
CAATGGCAATATATTGGTTTGGAAAAGAAAGGCTGAGCAGTATTTGGCTG
ACTCTGGTATTCCATACACAATTATAAGGGCCGGAGGCCTTCAGGATAAA
GAAGGTGGTATCCGAGAATTACTTGTCGGTAAGGATGATGAACTTCTTCA
GACAGAAACAAGGACAATTGCCAGGGCCGATGTTGCCGAAGTCTGCATTC
AGGCACTACAGTTTGAGGAGGCCAAATTTAAGGCATTTGATCTGGCCTCA
AAGCCTGAGGGAACTGGCACACCCACAAAGGATTTTAAAGCTCTCTTTTC
TCAAATTACTACTCATTTCTGAGTCTCAGTCGCCATTCTCCTCCTGAGTT
TTTATGTTAGAAAACTGTAATGCCTTGTATTAAAAGGGGAATGAATAAAT
GAATGCCGAAGATTTC
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