EY755907

Overview
NameEY755907
Unique NameEY755907
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length918
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1790 contig Csv1_Contig1790:599..1515. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY755907 vs. ExPASy Swiss-Prot
Match: SERC2_MOUSE (Serine incorporator 2 OS=Mus musculus GN=Serinc2 PE=2 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 2.558e-14
Identity = 38/73 (52.05%), Postives = 49/73 (67.12%), Query Frame = 2
Query:  548 VTYSYAFFHIIFSLASMYSAMLLTGWSTSVGESGKLVDVGWPSVWVRILTGWATAALYMWALVAPILXPDREF 766
            VTYSY+FFH    LAS++  M LT W  S GE+ K++   W SVWV+I   WA   LY+W LVAP+L P+R+F
Sbjct:  379 VTYSYSFFHFCLVLASLHVMMTLTNWY-SPGETRKMIST-WTSVWVKICASWAGLFLYLWTLVAPLLLPNRDF 449          
BLAST of EY755907 vs. ExPASy Swiss-Prot
Match: SERC3_BOVIN (Serine incorporator 3 OS=Bos taurus GN=SERINC3 PE=2 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 2.828e-13
Identity = 45/114 (39.47%), Postives = 68/114 (59.65%), Query Frame = 2
Query:   26 WIATWVGYDEQ----FWYVALLVVSLVCYVLTFGFSGLLFHWFT-PSGQDCGLNTFFIVMTLILAFIFAVVALHPAV-----GGSVLPASVISLYCMYLCYSGLSSEPRDYECN 337
            W  +WV   E+     WY ALL V+ + Y+L+  F+GLL+ ++T P G  C  N FFI   LIL  + +V+++HP +        +L +S+I+LY MYL +S +S+EP D  CN
Sbjct:  185 WNESWVNRMEEGNPKCWYAALLSVTSLFYILSIIFAGLLYTYYTKPDG--CTENKFFISFNLILCVVISVLSIHPKIQEHQPRSGLLQSSLITLYTMYLTWSAMSNEP-DRSCN 295          
BLAST of EY755907 vs. ExPASy Swiss-Prot
Match: SERC2_BOVIN (Serine incorporator 2 OS=Bos taurus GN=SERINC2 PE=2 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 2.828e-13
Identity = 35/73 (47.95%), Postives = 48/73 (65.75%), Query Frame = 2
Query:  548 VTYSYAFFHIIFSLASMYSAMLLTGWSTSVGESGKLVDVGWPSVWVRILTGWATAALYMWALVAPILXPDREF 766
            VTYSY+FFH+   LAS++  M LT W    GE+ K++   W +VWV+I   W    LY+W LVAP+L P+R+F
Sbjct:  381 VTYSYSFFHLCLVLASVHIMMTLTNWYRP-GETRKMIST-WTAVWVKICASWTGLLLYLWTLVAPLLLPNRDF 451          
BLAST of EY755907 vs. ExPASy Swiss-Prot
Match: SERIC_MONBE (Probable serine incorporator OS=Monosiga brevicollis GN=serinc PE=3 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 6.300e-13
Identity = 30/73 (41.10%), Postives = 50/73 (68.49%), Query Frame = 2
Query:  548 VTYSYAFFHIIFSLASMYSAMLLTGWSTSVGESGKLVDVGWPSVWVRILTGWATAALYMWALVAPILXPDREF 766
            V YS++FFH+ F++A++Y  M+LT W +S  ++   +  GW SVWV++++ W    LY W ++AP+  PDR+F
Sbjct:  412 VRYSWSFFHLTFAVAALYLMMVLTEWDSS--DADVRIGKGWASVWVQVVSSWVIFLLYGWTMMAPVCLPDRDF 482          
BLAST of EY755907 vs. ExPASy Swiss-Prot
Match: SERC2_HUMAN (Serine incorporator 2 OS=Homo sapiens GN=SERINC2 PE=2 SV=2)

HSP 1 Score: 73.9442 bits (180), Expect = 1.403e-12
Identity = 35/73 (47.95%), Postives = 47/73 (64.38%), Query Frame = 2
Query:  548 VTYSYAFFHIIFSLASMYSAMLLTGWSTSVGESGKLVDVGWPSVWVRILTGWATAALYMWALVAPILXPDREF 766
            VTYSY+FFH    LAS++  M LT W    GE+ K++   W +VWV+I   WA   LY+W LVAP+L  +R+F
Sbjct:  385 VTYSYSFFHFCLVLASLHVMMTLTNWYKP-GETRKMIST-WTAVWVKICASWAGLLLYLWTLVAPLLLRNRDF 455          
BLAST of EY755907 vs. ExPASy Swiss-Prot
Match: SERIC_NEMVE (Probable serine incorporator OS=Nematostella vectensis GN=serinc PE=3 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 3.127e-12
Identity = 31/73 (42.47%), Postives = 43/73 (58.90%), Query Frame = 2
Query:  548 VTYSYAFFHIIFSLASMYSAMLLTGWSTSVGESGKLVDVGWPSVWVRILTGWATAALYMWALVAPILXPDREF 766
            V YSY+F+H +  LAS+Y  M LT W   VG     +     +VWV+I + W    +Y+W L+AP L PDR+F
Sbjct:  383 VAYSYSFYHFMLMLASLYIMMTLTNWYKPVGSDFSKLQYSETAVWVKIASSWLCQLIYIWTLLAPALFPDRDF 455          

HSP 2 Score: 69.3218 bits (168), Expect = 3.457e-11
Identity = 46/117 (39.32%), Postives = 62/117 (52.99%), Query Frame = 2
Query:   26 WIATWVGYDEQ----FWYVALLVVSLVCYVLTFGFSGLLFHWFTPSGQD-CGLNTFFIVMTLILAFIFAVVALHPAV-----GGSVLPASVISLYCMYLCYSGLSSEPRDYECNGLH 346
            W ++WVG  E+     W V LL  + + Y         L+ +FT S +  C  N FFI   LIL  I +V+A+HP V        +L ASVISLY +YL +S LS +P D  CNG +
Sbjct:  180 WNSSWVGRMEESGSKVWAVLLLCATFLMYGFCVAGIVCLYVYFTYSQESSCHTNKFFISFNLILCIIASVLAIHPKVQERLPTSGLLQASVISLYTVYLTWSALSFQP-DKNCNGFY 295          
BLAST of EY755907 vs. ExPASy Swiss-Prot
Match: SERC3_PONAB (Serine incorporator 3 OS=Pongo abelii GN=SERINC3 PE=2 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 6.965e-12
Identity = 43/114 (37.72%), Postives = 65/114 (57.02%), Query Frame = 2
Query:   26 WIATWVGYDEQ----FWYVALLVVSLVCYVLTFGFSGLLFHWFT-PSGQDCGLNTFFIVMTLILAFIFAVVALHPAVG-----GSVLPASVISLYCMYLCYSGLSSEPRDYECN 337
            W  +WV   E+     WY ALL  +   Y+L+    GLL+ ++T P G  C  N FFI + LIL  + +++++HP +        +L +SVI+LY MYL +S +S+EP D  CN
Sbjct:  186 WNESWVNRMEEGNPRLWYAALLSFTSAFYILSIICVGLLYTYYTKPDG--CTENKFFISINLILCVVASIISIHPKIQEHQPRSGLLQSSVITLYTMYLTWSAMSNEP-DRSCN 296          

HSP 2 Score: 68.9366 bits (167), Expect = 4.515e-11
Identity = 30/73 (41.10%), Postives = 44/73 (60.27%), Query Frame = 2
Query:  548 VTYSYAFFHIIFSLASMYSAMLLTGWSTSVGESGKLVDVGWPSVWVRILTGWATAALYMWALVAPILXPDREF 766
            V YSY+ FH++  LAS+Y  M LT W +   +   +    WP+VWV+I + W    LY+W LVAP++   R+F
Sbjct:  401 VQYSYSLFHLMLCLASLYIMMTLTSWYSPDAKFQSMTSK-WPAVWVKISSSWVCLLLYVWTLVAPLVLTSRDF 472          
BLAST of EY755907 vs. ExPASy Swiss-Prot
Match: SERC3_HUMAN (Serine incorporator 3 OS=Homo sapiens GN=SERINC3 PE=1 SV=2)

HSP 1 Score: 70.4774 bits (171), Expect = 1.552e-11
Identity = 42/114 (36.84%), Postives = 65/114 (57.02%), Query Frame = 2
Query:   26 WIATWVGYDEQ----FWYVALLVVSLVCYVLTFGFSGLLFHWFT-PSGQDCGLNTFFIVMTLILAFIFAVVALHPAVG-----GSVLPASVISLYCMYLCYSGLSSEPRDYECN 337
            W  +WV   E+     WY ALL  +   Y+L+    GLL+ ++T P G  C  N FFI + LIL  + +++++HP +        +L +S+I+LY MYL +S +S+EP D  CN
Sbjct:  186 WNESWVNRMEEGNPRLWYAALLSFTSAFYILSIICVGLLYTYYTKPDG--CTENKFFISINLILCVVASIISIHPKIQEHQPRSGLLQSSLITLYTMYLTWSAMSNEP-DRSCN 296          

HSP 2 Score: 68.9366 bits (167), Expect = 4.515e-11
Identity = 30/73 (41.10%), Postives = 44/73 (60.27%), Query Frame = 2
Query:  548 VTYSYAFFHIIFSLASMYSAMLLTGWSTSVGESGKLVDVGWPSVWVRILTGWATAALYMWALVAPILXPDREF 766
            V YSY+ FH++  LAS+Y  M LT W +   +   +    WP+VWV+I + W    LY+W LVAP++   R+F
Sbjct:  401 VQYSYSLFHLMLCLASLYIMMTLTSWYSPDAKFQSMTSK-WPAVWVKISSSWVCLLLYVWTLVAPLVLTSRDF 472          
BLAST of EY755907 vs. ExPASy Swiss-Prot
Match: SERC1_RAT (Serine incorporator 1 OS=Rattus norvegicus GN=Serinc1 PE=1 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 2.647e-11
Identity = 32/73 (43.84%), Postives = 45/73 (61.64%), Query Frame = 2
Query:  548 VTYSYAFFHIIFSLASMYSAMLLTGWSTSVGESGKLVDVGWPSVWVRILTGWATAALYMWALVAPILXPDREF 766
            VTYSY+FFH +  LAS+Y  M LT W     E  + +   W +VWV+I + W    LY+W LVAP++  +R+F
Sbjct:  382 VTYSYSFFHFMLFLASLYIMMTLTNWYRY--EPSREMKSQWTAVWVKISSSWIGIVLYVWTLVAPLVLTNRDF 452          
BLAST of EY755907 vs. ExPASy Swiss-Prot
Match: SERC1_PONAB (Serine incorporator 1 OS=Pongo abelii GN=SERINC1 PE=2 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 2.647e-11
Identity = 32/73 (43.84%), Postives = 45/73 (61.64%), Query Frame = 2
Query:  548 VTYSYAFFHIIFSLASMYSAMLLTGWSTSVGESGKLVDVGWPSVWVRILTGWATAALYMWALVAPILXPDREF 766
            VTYSY+FFH +  LAS+Y  M LT W     E  + +   W +VWV+I + W    LY+W LVAP++  +R+F
Sbjct:  382 VTYSYSFFHFMLFLASLYIMMTLTNWYRY--EPSREMKSQWTAVWVKISSSWIGIVLYVWTLVAPLVLTNRDF 452          
The following BLAST results are available for this feature:
BLAST of EY755907 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 13
Match NameE-valueIdentityDescription
SERC2_MOUSE2.558e-1452.05Serine incorporator 2 OS=Mus musculus GN=Serinc2 P... [more]
SERC3_BOVIN2.828e-1339.47Serine incorporator 3 OS=Bos taurus GN=SERINC3 PE=... [more]
SERC2_BOVIN2.828e-1347.95Serine incorporator 2 OS=Bos taurus GN=SERINC2 PE=... [more]
SERIC_MONBE6.300e-1341.10Probable serine incorporator OS=Monosiga brevicoll... [more]
SERC2_HUMAN1.403e-1247.95Serine incorporator 2 OS=Homo sapiens GN=SERINC2 P... [more]
SERIC_NEMVE3.127e-1242.47Probable serine incorporator OS=Nematostella vecte... [more]
SERC3_PONAB6.965e-1237.72Serine incorporator 3 OS=Pongo abelii GN=SERINC3 P... [more]
SERC3_HUMAN1.552e-1136.84Serine incorporator 3 OS=Homo sapiens GN=SERINC3 P... [more]
SERC1_RAT2.647e-1143.84Serine incorporator 1 OS=Rattus norvegicus GN=Seri... [more]
SERC1_PONAB2.647e-1143.84Serine incorporator 1 OS=Pongo abelii GN=SERINC1 P... [more]

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Properties
Property NameValue
Genbank descriptionCS13-C1-001-001-C07-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY755907 ID=EY755907; Name=EY755907; organism=Citrus sinensis; type=EST; length=918bp
TCCGAAAGACCCACGCGTCCGCAGATGGATCGCGACGTGGGTTGGATATG
ATGAGCAGTTCTGGTATGTTGCCCTATTGGTTGTTTCTCTTGTTTGTTAC
GTGCTGACATTTGGCTTCTCGGGACTTCTTTTCCATTGGTTCACACCATC
AGGGCAGGATTGTGGGCTCAATACATTCTTCATTGTTATGACCTTGATTC
TTGCATTTATCTTCGCTGTAGTTGCTCTACATCCCGCTGTGGGTGGCAGC
GTTTTGCCTGCTTCAGTAATATCTCTTTACTGCATGTACCTCTGTTACAG
TGGACTTTCAAGTGAACCAAGAGATTATGAATGCAATGGTCTCCACAGGC
ATTCTAAAGCTGTCTCTACTGGCAGCCTTACCTTGGGCCTGATTACCACT
GTCCTATCAGTAGTATATTCTGCAGTGCGTGCTGGATCTTCTACAACTCT
GCTTTCACCACCAAGTTCACCTCGTGCAGGTGGCGGGAAGCCTCTGCTTC
CAATGGACAAGGCCGATGAGGTAGAAGAAAAGGAAAAGGCCAAGCCAGTC
ACATATTCATATGCTTTCTTCCACATTATTTTCTCTCTGGCCAGCATGTA
TTCTGCAATGCTTCTAACTGGGTGGTCAACCTCTGTCGGGGAGAGTGGGA
AGCTAGTTGACGTGGGTTGGCCATCTGTCTGGGTTAGGATTCTGACCGGG
TGGGCAACTGCAGCTCTCTACATGTGGGCACTGGTTGCTCCAATTCTGNT
CCCGGACAGGGAGTTCTGAATTCCCAAAAATGTTTAATACCCCTATATAT
ATTGTGCATGTGTGATGCAGCTCCCTAAGGNTAAACGTATACTGTTTGGA
TGCTTTGCTACATAAAATGGAAAATGTTGGCTATCCTAAGTTGATGAATT
GATTGCTTCAAAATAAAA
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