EY730902

Overview
NameEY730902
Unique NameEY730902
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length799
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig9303 contig Csv1_Contig9303:5..802. BLAST: Citrus Unigene V1 Contigs to SwissProt
Homology
BLAST of EY730902 vs. ExPASy Swiss-Prot
Match: NAGZ_PSEAE (Beta-hexosaminidase OS=Pseudomonas aeruginosa GN=nagZ PE=3 SV=1)

HSP 1 Score: 376.326 bits (965), Expect = 1.061e-103
Identity = 184/214 (85.98%), Postives = 201/214 (93.93%), Query Frame = -2
Query:    1 LQGSXMVDVAGTWLTAEDRHLLRQPEVGGLIIFARNIEHPRQVRELSAAIRAVRPDLLLAVDQEGGRVQRLRQGFVRLPAMRALADNPNAEQLAEQCGWIMATEVLAVGLDLSFAPVLDLDYQRSAVVGTRAFEGDPERAAVLAGAFIRGMNSAGMAATGKHFPGHGWAEADSHVAIPNDERSLEQIRANDLVPFARLSKQLAAVMPAHVIYPQ 642
            +QGS M+D+ GTWLTAEDR +LR PEVGGLIIFARNIEHP QVREL AAIRA+RPDLLLAVDQEGGRVQRLRQGFVRLPAMRA+ADNPNAE+LAE CGW+MATEV AVGLDLSFAPVLDLD+QRSAVVG+RAFEGDPERAA+LAGAFIRGM++AGMAATGKHFPGHGWAEADSHVAIP D RSLE+IR +DLVPFARL+ QL A+MPAHVIYPQ
Sbjct:    1 MQGSLMLDIGGTWLTAEDRQILRHPEVGGLIIFARNIEHPAQVRELCAAIRAIRPDLLLAVDQEGGRVQRLRQGFVRLPAMRAIADNPNAEELAEHCGWLMATEVQAVGLDLSFAPVLDLDHQRSAVVGSRAFEGDPERAALLAGAFIRGMHAAGMAATGKHFPGHGWAEADSHVAIPEDARSLEEIRRSDLVPFARLAGQLDALMPAHVIYPQ 214          
BLAST of EY730902 vs. ExPASy Swiss-Prot
Match: NAGZ_PSEAB (Beta-hexosaminidase OS=Pseudomonas aeruginosa (strain UCBPP-PA14) GN=nagZ PE=3 SV=1)

HSP 1 Score: 376.326 bits (965), Expect = 1.061e-103
Identity = 184/214 (85.98%), Postives = 201/214 (93.93%), Query Frame = -2
Query:    1 LQGSXMVDVAGTWLTAEDRHLLRQPEVGGLIIFARNIEHPRQVRELSAAIRAVRPDLLLAVDQEGGRVQRLRQGFVRLPAMRALADNPNAEQLAEQCGWIMATEVLAVGLDLSFAPVLDLDYQRSAVVGTRAFEGDPERAAVLAGAFIRGMNSAGMAATGKHFPGHGWAEADSHVAIPNDERSLEQIRANDLVPFARLSKQLAAVMPAHVIYPQ 642
            +QGS M+D+ GTWLTAEDR +LR PEVGGLIIFARNIEHP QVREL AAIRA+RPDLLLAVDQEGGRVQRLRQGFVRLPAMRA+ADNPNAE+LAE CGW+MATEV AVGLDLSFAPVLDLD+QRSAVVG+RAFEGDPERAA+LAGAFIRGM++AGMAATGKHFPGHGWAEADSHVAIP D RSLE+IR +DLVPFARL+ QL A+MPAHVIYPQ
Sbjct:    1 MQGSLMLDIGGTWLTAEDRQILRHPEVGGLIIFARNIEHPAQVRELCAAIRAIRPDLLLAVDQEGGRVQRLRQGFVRLPAMRAIADNPNAEELAEHCGWLMATEVQAVGLDLSFAPVLDLDHQRSAVVGSRAFEGDPERAALLAGAFIRGMHAAGMAATGKHFPGHGWAEADSHVAIPEDARSLEEIRRSDLVPFARLAGQLDALMPAHVIYPQ 214          
BLAST of EY730902 vs. ExPASy Swiss-Prot
Match: NAGZ_PSEA8 (Beta-hexosaminidase OS=Pseudomonas aeruginosa (strain LESB58) GN=nagZ PE=3 SV=1)

HSP 1 Score: 376.326 bits (965), Expect = 1.061e-103
Identity = 184/214 (85.98%), Postives = 201/214 (93.93%), Query Frame = -2
Query:    1 LQGSXMVDVAGTWLTAEDRHLLRQPEVGGLIIFARNIEHPRQVRELSAAIRAVRPDLLLAVDQEGGRVQRLRQGFVRLPAMRALADNPNAEQLAEQCGWIMATEVLAVGLDLSFAPVLDLDYQRSAVVGTRAFEGDPERAAVLAGAFIRGMNSAGMAATGKHFPGHGWAEADSHVAIPNDERSLEQIRANDLVPFARLSKQLAAVMPAHVIYPQ 642
            +QGS M+D+ GTWLTAEDR +LR PEVGGLIIFARNIEHP QVREL AAIRA+RPDLLLAVDQEGGRVQRLRQGFVRLPAMRA+ADNPNAE+LAE CGW+MATEV AVGLDLSFAPVLDLD+QRSAVVG+RAFEGDPERAA+LAGAFIRGM++AGMAATGKHFPGHGWAEADSHVAIP D RSLE+IR +DLVPFARL+ QL A+MPAHVIYPQ
Sbjct:    1 MQGSLMLDIGGTWLTAEDRQILRHPEVGGLIIFARNIEHPAQVRELCAAIRAIRPDLLLAVDQEGGRVQRLRQGFVRLPAMRAIADNPNAEELAEHCGWLMATEVQAVGLDLSFAPVLDLDHQRSAVVGSRAFEGDPERAALLAGAFIRGMHAAGMAATGKHFPGHGWAEADSHVAIPEDARSLEEIRRSDLVPFARLAGQLDALMPAHVIYPQ 214          
BLAST of EY730902 vs. ExPASy Swiss-Prot
Match: NAGZ_IDILO (Beta-hexosaminidase OS=Idiomarina loihiensis GN=nagZ PE=3 SV=1)

HSP 1 Score: 224.942 bits (572), Expect = 3.950e-58
Identity = 119/213 (55.87%), Postives = 148/213 (69.48%), Query Frame = -2
Query:    1 MVDVAGTWLTAEDRHLLRQPEVGGLIIFARNIEHPRQVRELSAAIRAVRPD-LLLAVDQEGGRVQRLRQGFVRLPAMRALADNPNAEQ---LAEQCGWIMATEVLAVGLDLSFAPVLDLDYQRSAVVGTRAFEGDPERAAVLAGAFIRGMNSAGMAATGKHFPGHGWAEADSHVAIPNDERSLEQIRANDLVPFARLSKQLAAVMPAHVIYPQ 627
            M+D+AGT LTAED+ LL  P V GLI+F RN     Q++EL    RA     LL+AVD EGGRVQR R+GF  +P+M +L    N ++    A   GW+MA EV AVG+D+SFAPVLD+D   S V+G RAF   P   + LA +FI GM+ AGMA TGKHFPGHG  +ADSH+AIP D+R+LEQIRA+DL PF  L ++L  +MPAHVIYPQ
Sbjct:    5 MIDIAGTELTAEDKKLLAAPAVNGLILFTRNFASLEQLQELIREARAAAAKPLLIAVDHEGGRVQRFREGFSAIPSMGSLQKIENEDERQRAARDLGWLMAAEVQAVGIDISFAPVLDVD-DCSDVIGDRAFSAVPSEISKLASSFIEGMHEAGMACTGKHFPGHGSVQADSHIAIPEDDRTLEQIRAHDLKPFLSLIQKLDGIMPAHVIYPQ 216          
BLAST of EY730902 vs. ExPASy Swiss-Prot
Match: NAGZ_METFK (Beta-hexosaminidase OS=Methylobacillus flagellatus (strain KT / ATCC 51484 / DSM 6875) GN=nagZ PE=3 SV=1)

HSP 1 Score: 223.402 bits (568), Expect = 1.149e-57
Identity = 118/219 (53.88%), Postives = 150/219 (68.49%), Query Frame = -2
Query:    1 GSXMVDVAGTWLTAEDRHLLRQPEVGGLIIFARNIEHPRQVRELSAAIRAVR-PDLLLAVDQEGGRVQRLRQGFVRLPAMRALA----DNPN-AEQLAEQCGWIMATEVLAVGLDLSFAPVLDLDYQRSAVVGTRAFEGDPERAAVLAGAFIRGMNSAGMAATGKHFPGHGWAEADSHVAIPNDERSLEQIRANDLVPFARL-SKQLAAVMPAHVIYPQ 636
            G  M+DV GT LT ED   +R P VGG+I+FARN E P Q++ L+ +I AVR P LL+AVD EGGRVQR R+GF R+P MR       ++P  A QLAE+ GWI+A E+ A G+D SF PVLD+DY  S V+G RAF GD +    LA + ++G+   GMAA GKHFPGHG+  ADSHVAIP DER  +QI + D+  F +L    + A+MPAHVIYP+
Sbjct:    4 GPIMLDVVGTELTQEDIRRIRHPLVGGVILFARNFESPAQLKALTDSIHAVRQPPLLIAVDHEGGRVQRFREGFTRIPPMREFGKIWDEHPRKARQLAEEAGWIIAAELRAHGIDFSFTPVLDMDYGESQVIGDRAFHGDRQAINELAFSLMQGLKRGGMAAVGKHFPGHGYVVADSHVAIPVDERDFDQIASTDMQTFRQLIDDGIQAIMPAHVIYPK 222          
BLAST of EY730902 vs. ExPASy Swiss-Prot
Match: NAGZ_CHRVO (Beta-hexosaminidase OS=Chromobacterium violaceum GN=nagZ PE=3 SV=1)

HSP 1 Score: 223.016 bits (567), Expect = 1.501e-57
Identity = 118/219 (53.88%), Postives = 150/219 (68.49%), Query Frame = -2
Query:    4 QGSXMVDVAGTWLTAEDRHLLRQPEVGGLIIFARNIEHPRQVRELSAAIRAVR-PDLLLAVDQEGGRVQRLRQGFVRLPAMRAL-----ADNPNAEQLAEQCGWIMATEVLAVGLDLSFAPVLDLDYQRSAVVGTRAFEGDPERAAVLAGAFIRGMNSAGMAATGKHFPGHGWAEADSHVAIPNDERSLEQIRANDLVPFARLSKQ-LAAVMPAHVIYP 639
            +G  MVD+AG  LT  +R  L  P VGG+I+F RN  +  Q+R L+A IRA+R P LL+AVD EGGRVQR   GF RLP MR L     AD   A +LAE  G+++A E+ A G+DLSF PVLDLD++R AV+G RAF  DPE  + LA A  +G+   GM + GKH+PGHG+ E DSH  +P D+R+L QI  +DLVPFARL+   + AVMPAHV+YP
Sbjct:    5 RGPVMVDIAGFALTEAERARLSHPLVGGVILFRRNFHNIEQLRALTAEIRALRTPHLLIAVDHEGGRVQRFLDGFTRLPPMRVLGEAWDADRDQALKLAETVGYVLAAELSACGIDLSFTPVLDLDWERCAVIGNRAFHRDPEAVSALAEALQQGLGRGGMMSCGKHYPGHGYVEGDSHHLMPQDDRTLAQIEQDDLVPFARLADAGMGAVMPAHVLYP 223          
BLAST of EY730902 vs. ExPASy Swiss-Prot
Match: NAGZ_NEIMA (Beta-hexosaminidase OS=Neisseria meningitidis serogroup A GN=nagZ PE=3 SV=1)

HSP 1 Score: 218.394 bits (555), Expect = 3.697e-56
Identity = 112/221 (50.68%), Postives = 150/221 (67.87%), Query Frame = -2
Query:    1 QGSXMVDVAGTWLTAEDRHLLRQPEVGGLIIFARNIEHPRQVRELSAAIRAVR-PDLLLAVDQEGGRVQRLRQGFVRLPAMRALAD------NPNAEQLAEQCGWIMATEVLAVGLDLSFAPVLDLDYQRSAVVGTRAFEGDPERAAVLAGAFIRGMNSAGMAATGKHFPGHGWAEADSHVAIPNDERSLEQIRANDLVPFARLSKQ-LAAVMPAHVIYPQ 639
            +G  M D+A   LT E++  L  P VGG+I+F RN ++  Q++EL+A I+A+R P+L++AVD EGGRVQR  +GF RLPAM  L           AE  A Q GW++ATE+ A G+DLSF PVLDLD+   AV+G R+F  +PE  A LA A  +G+   GM + GKHFPGHG+ E DSH+ +P D RSL ++ A DL PF  +S++ +AAVMPAHV+YPQ
Sbjct:    8 RGPVMADIAAFRLTEEEKQRLLDPAVGGVILFRRNFQNIAQLKELTAEIKALRTPELIIAVDHEGGRVQRFIEGFTRLPAMNVLGQIWDKDGASAAETAARQIGWVLATELSACGIDLSFTPVLDLDWGNCAVIGNRSFHRNPEAVARLALALQKGLEKGGMKSCGKHFPGHGFVEGDSHLVLPEDGRSLSELEAADLAPFRIMSREGMAAVMPAHVVYPQ 228          
BLAST of EY730902 vs. ExPASy Swiss-Prot
Match: NAGZ_YERPY (Beta-hexosaminidase OS=Yersinia pseudotuberculosis serotype O:3 (strain YPIII) GN=nagZ PE=3 SV=1)

HSP 1 Score: 217.624 bits (553), Expect = 6.306e-56
Identity = 116/218 (53.21%), Postives = 151/218 (69.27%), Query Frame = -2
Query:    1 GSXMVDVAGTWLTAEDRHLLRQPEVGGLIIFARNIEHPRQVRELSAAIRAVRPD-LLLAVDQEGGRVQRLRQGFVRLPAMRALA---DNPNAEQLAEQCGWIMATEVLAVGLDLSFAPVLDLDYQRSAVVGTRAFEGDPERAAVLAGAFIRGMNSAGMAATGKHFPGHGWAEADSHVAIPNDERSLEQIRANDLVPFARL--SKQLAAVMPAHVIYPQ 636
            G  M+DVA   L AE+R +L+ P VGGLI+F+RN     Q+REL   IRA   + L++AVDQEGGRVQR R GF RLPA ++ A   D   A QLA++ GW+MA E++A+ +D+SFAPVLD+ +  SA +G R+F  DP++A ++A  FIRGM+SAGM  TGKHFPGHG   ADSH   P+D R L +IR +D+V F  L   K L A+MPAHVIY +
Sbjct:    2 GPVMLDVASYELDAEEREILKHPLVGGLILFSRNFHDAEQLRELVRQIRAASHERLVVAVDQEGGRVQRFRDGFTRLPAAQSFAAINDAATAAQLAQEAGWLMAAEMMAMDIDISFAPVLDIGHV-SAAIGERSFHSDPQQARIMAECFIRGMHSAGMKTTGKHFPGHGAVTADSHKETPHDNRPLAEIRTHDMVIFRELIQRKLLDAIMPAHVIYTE 218          
BLAST of EY730902 vs. ExPASy Swiss-Prot
Match: NAGZ_YERP3 (Beta-hexosaminidase OS=Yersinia pseudotuberculosis serotype O:1b (strain IP 31758) GN=nagZ PE=3 SV=1)

HSP 1 Score: 217.624 bits (553), Expect = 6.306e-56
Identity = 116/218 (53.21%), Postives = 151/218 (69.27%), Query Frame = -2
Query:    1 GSXMVDVAGTWLTAEDRHLLRQPEVGGLIIFARNIEHPRQVRELSAAIRAVRPD-LLLAVDQEGGRVQRLRQGFVRLPAMRALA---DNPNAEQLAEQCGWIMATEVLAVGLDLSFAPVLDLDYQRSAVVGTRAFEGDPERAAVLAGAFIRGMNSAGMAATGKHFPGHGWAEADSHVAIPNDERSLEQIRANDLVPFARL--SKQLAAVMPAHVIYPQ 636
            G  M+DVA   L AE+R +L+ P VGGLI+F+RN     Q+REL   IRA   + L++AVDQEGGRVQR R GF RLPA ++ A   D   A QLA++ GW+MA E++A+ +D+SFAPVLD+ +  SA +G R+F  DP++A ++A  FIRGM+SAGM  TGKHFPGHG   ADSH   P+D R L +IR +D+V F  L   K L A+MPAHVIY +
Sbjct:    2 GPVMLDVASYELDAEEREILKHPLVGGLILFSRNFHDAEQLRELVRQIRAASHERLVVAVDQEGGRVQRFRDGFTRLPAAQSFAAINDAATAAQLAQEAGWLMAAEMMAMDIDISFAPVLDIGHV-SAAIGERSFHSDPQQARIMAECFIRGMHSAGMKTTGKHFPGHGAVTADSHKETPHDNRPLAEIRTHDMVIFRELIQRKLLDAIMPAHVIYTE 218          
BLAST of EY730902 vs. ExPASy Swiss-Prot
Match: NAGZ_YERPE (Beta-hexosaminidase OS=Yersinia pestis GN=nagZ PE=3 SV=1)

HSP 1 Score: 217.238 bits (552), Expect = 8.235e-56
Identity = 116/218 (53.21%), Postives = 151/218 (69.27%), Query Frame = -2
Query:    1 GSXMVDVAGTWLTAEDRHLLRQPEVGGLIIFARNIEHPRQVRELSAAIRAVRPD-LLLAVDQEGGRVQRLRQGFVRLPAMR---ALADNPNAEQLAEQCGWIMATEVLAVGLDLSFAPVLDLDYQRSAVVGTRAFEGDPERAAVLAGAFIRGMNSAGMAATGKHFPGHGWAEADSHVAIPNDERSLEQIRANDLVPFARL--SKQLAAVMPAHVIYPQ 636
            G  M+DVA   L AE+R +L+ P VGGLI+F+RN     Q+REL   IRA   + L++AVDQEGGRVQR R GF RLPA +   A+ D   A QLA++ GW+MA E++A+ +D+SFAPVLD+ +  SA +G R+F  DP++A ++A  FIRGM+SAGM  TGKHFPGHG   ADSH   P+D R L +IR +D+V F  L   K L A+MPAHVIY +
Sbjct:    2 GPVMLDVASYELDAEEREILKHPLVGGLILFSRNFHDAEQLRELVRQIRAASHERLVVAVDQEGGRVQRFRDGFTRLPAAQYFAAINDAATAAQLAQEAGWLMAAEMMAMDIDISFAPVLDIGHV-SAAIGERSFHSDPQQARIMAECFIRGMHSAGMKTTGKHFPGHGAVTADSHKETPHDNRPLAEIRTHDMVIFRELIQRKLLDAIMPAHVIYTE 218          
The following BLAST results are available for this feature:
BLAST of EY730902 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 119
Match NameE-valueIdentityDescription
NAGZ_PSEAE1.061e-10385.98Beta-hexosaminidase OS=Pseudomonas aeruginosa GN=n... [more]
NAGZ_PSEAB1.061e-10385.98Beta-hexosaminidase OS=Pseudomonas aeruginosa (str... [more]
NAGZ_PSEA81.061e-10385.98Beta-hexosaminidase OS=Pseudomonas aeruginosa (str... [more]
NAGZ_IDILO3.950e-5855.87Beta-hexosaminidase OS=Idiomarina loihiensis GN=na... [more]
NAGZ_METFK1.149e-5753.88Beta-hexosaminidase OS=Methylobacillus flagellatus... [more]
NAGZ_CHRVO1.501e-5753.88Beta-hexosaminidase OS=Chromobacterium violaceum G... [more]
NAGZ_NEIMA3.697e-5650.68Beta-hexosaminidase OS=Neisseria meningitidis sero... [more]
NAGZ_YERPY6.306e-5653.21Beta-hexosaminidase OS=Yersinia pseudotuberculosis... [more]
NAGZ_YERP36.306e-5653.21Beta-hexosaminidase OS=Yersinia pseudotuberculosis... [more]
NAGZ_YERPE8.235e-5653.21Beta-hexosaminidase OS=Yersinia pestis GN=nagZ PE=... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C3-704-036-C04-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY730902 ID=EY730902; Name=EY730902; organism=Citrus sinensis; type=EST; length=799bp
CTGTGGATAAATCACGTGGGCCGGCATGACGGCCGCCAACTGCTTGCTCA
GGCGTGCGAACGGCACCAGGTCATTGGCGCGAATCTGTTCCAGGCTGCGC
TCATCATTGGGAATCGCGACGTGGGAATCGGCTTCGGCCCAGCCGTGGCC
GGGGAAGTGTTTGCCGGTAGCGGCCATGCCAGCGCTGTTCATCCCGCGAA
TAAAGGCACCGGCAAGCACCGCGGCGCGCTCGGGGTCGCCTTCGAATGCG
CGCGTGCCCACGACTGCGCTGCGTTGGTAATCGAGGTCCAGTACCGGCGC
GAAGCTCAGGTCCAGGCCGACCGCCAGTACTTCTGTCGCCATGATCCAAC
CGCACTGCTCGGCCAGTTGTTCGGCATTCGGGTTGTCGGCCAAGGCGCGC
ATCGCCGGCAGGCGGACGAACCCTTGGCGCAAACGCTGTACCCGGCCGCC
TTCCTGATCGACCGCCAGCAGCAGGTCCGGGCGCACGGCGCGAATCGCGG
CGCTCAACTCACGCACCTGGCGCGGATGCTCAATATTGCGCGCAAAAATG
ATCAGGCCGCCCACCTCGGGCTGGCGCAACAAGTGGCGGTCTTCAGCCGT
CAGCCAGGTACCGGCGACGTCCACCATCANAGAGCCTTGCAGGGCTTGGG
TCATAAAGCTTCCTTAAATAACGCACGCAGCCCGGAGCCCTCGCGAGATC
GCATCGCAAGGGTTGAATCTGGGAGACGGACGCTCAACGAGAGCCACGGG
CTGTGGGTAAATACCCTGAATCGGGATGGGCGGCTACTTAACGGGATCC
back to top