EY755483

Overview
NameEY755483
Unique NameEY755483
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length543
Libraries
Library NameType
Sweet orange leaf, field plant Acdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig9361 contig Csv1_Contig9361:850..1392. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY755483 vs. ExPASy Swiss-Prot
Match: S35B1_DICDI (Solute carrier family 35 member B1 OS=Dictyostelium discoideum GN=slc35b1 PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 1.832e-13
Identity = 35/67 (52.24%), Postives = 46/67 (68.66%), Query Frame = 3
Query:   18 YCLCGAVGQNFIFLTISRFGSLTNTTITTTRKFVSIVVSSVLSGNPLSSKQWGCVLMVFSGLSYQIY 218
            +C+  A+GQ FIFLT ++FGSL  +TITTTRKF SI+VS    G+ L + QW  + MVF GL   +Y
Sbjct:  185 FCITSAIGQQFIFLTTNKFGSLNCSTITTTRKFFSILVSIFYFGHSLDNLQWAAICMVFGGLILDLY 251          
BLAST of EY755483 vs. ExPASy Swiss-Prot
Match: S35B1_XENLA (Solute carrier family 35 member B1 OS=Xenopus laevis GN=slc35b1 PE=2 SV=1)

HSP 1 Score: 66.6254 bits (161), Expect = 8.510e-11
Identity = 33/62 (53.23%), Postives = 43/62 (69.35%), Query Frame = 3
Query:   18 YCLCGAVGQNFIFLTISRFGSLTNTTITTTRKFVSIVVSSVLSGNPLSSKQWGCVLMVFSGL 203
            + L  A+GQ FIF+T+  FG LT + ITTTRKF +I+ S +L  NP+SS QW   L+VF GL
Sbjct:  244 FSLTSALGQTFIFMTVVYFGPLTCSIITTTRKFFTILASVILFSNPISSIQWVGTLLVFLGL 305          
BLAST of EY755483 vs. ExPASy Swiss-Prot
Match: HUT1_ASHGO (UDP-galactose transporter homolog 1 OS=Ashbya gossypii GN=HUT1 PE=3 SV=1)

HSP 1 Score: 66.6254 bits (161), Expect = 8.510e-11
Identity = 29/67 (43.28%), Postives = 45/67 (67.16%), Query Frame = 3
Query:   12 FFYCLCGAVGQNFIFLTISRFGSLTNTTITTTRKFVSIVVSSVLSGNPLSSKQWGCVLMVFSGLSYQ 212
            F YC CGA+GQ F+F T+  + SL   T+T TRK VS+++S V+ G+ +   QW  +L+VF G+ ++
Sbjct:  242 FTYCACGALGQCFVFFTLEHYSSLVLATVTVTRKMVSMLLSIVVYGHSVRPVQWLGILVVFGGIIWE 308          
The following BLAST results are available for this feature:
BLAST of EY755483 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 3
Match NameE-valueIdentityDescription
S35B1_DICDI1.832e-1352.24Solute carrier family 35 member B1 OS=Dictyosteliu... [more]
S35B1_XENLA8.510e-1153.23Solute carrier family 35 member B1 OS=Xenopus laev... [more]
HUT1_ASHGO8.510e-1143.28UDP-galactose transporter homolog 1 OS=Ashbya goss... [more]
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Properties
Property NameValue
Genbank descriptionCS12-C1-001-028-G11-CT.F Sweet orange leaf, field plant A Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY755483 ID=EY755483; Name=EY755483; organism=Citrus sinensis; type=EST; length=543bp
CCACGCGTCCGTTTTTCTATTGCTTATGTGGTGCAGTGGGTCAGAATTTC
ATCTTTCTAACTATTAGCCGATTCGGCTCCCTCACTAACACCACCATCAC
CACCACACGCAAGTTTGTCAGCATTGTGGTGTCTTCTGTGCTGAGTGGCA
ATCCCCTGTCATCAAAGCAATGGGGATGCGTTCTCATGGTCTTCTCTGGG
CTGTCATACCAGATCTATCTGAAATGGAGGAAGCTGCAAAGACTACAGAA
GAAGAGGAAGCCCATGTGAAGAGGGAATGGATCATTTTGAACCTCACATT
TGACTTTATTTTTCCTTTTTCTTTTCCTTCTTGTTAAATCTTCACTGTAA
CCATAAGGTTCAGTGGTTCCATATTTAGATGATACTTAGAGAATACTGAC
TGTGTTTTGGTAGATATTTTAAGAAGAAAATTAAAAGTTAGTGAGAATTG
GATTTTGGTTGTGTACAATGATTTTCANNTTNNNAAAAAAAAAAAAAAAA
AAAAAAAAAAAAAAAAAAAAAAAAAAAAANAANAAAAAANNNN
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