EY755479

Overview
NameEY755479
Unique NameEY755479
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length936
Libraries
Library NameType
Sweet orange leaf, field plant Acdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig10207 contig Csv1_Contig10207:129..1065. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY755479 vs. ExPASy Swiss-Prot
Match: CHID1_DICDI (Chitinase domain-containing protein 1 OS=Dictyostelium discoideum GN=chid1 PE=3 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 7.233e-19
Identity = 60/194 (30.93%), Postives = 98/194 (50.52%), Query Frame = 1
Query:  238 QRGLVKTDVNYQEILTENSKVSENASHRYYTYP-VLAYITPWNSKGYELAKMFNSKFTHLSPVWYDLKSQGTSLILEGRHNADAGWLLELIKGD----ALVLPRVVLEA--FPXXXXXXXXXXXXXXXXXXTECKEMEYDGIVLESWSTWTAYGILH-DPELRNMALEFIKQLGNALHSVNSVRNRKXTLQVVY 795
            QRGLV+ +V+ ++I+   +K  +N   + +     L YITPWN KGY++A  +  KFTH+SPVW+ +K +   +++EG HN D  W +E +K +    + +LPR   E   +                   +  K+  YDG+V+E        GI+H + +LR+    F+  L   LHS+      K  + V+Y
Sbjct:   46 QRGLVRENVSAKQIINNYNKYFKNVDIKNFEQGNTLVYITPWNGKGYDVATKWAKKFTHISPVWHQVKFENNKVMIEGDHNIDKKW-MEKVKENSDQKSKILPRFSFEGQQWGSKESFQKYIDPKLIDSLVSTVKKNNYDGLVIE--------GIVHINKQLRD---PFLISLSEKLHSIG-----KEIILVIY 222          

HSP 2 Score: 26.9498 bits (58), Expect = 7.233e-19
Identity = 14/27 (51.85%), Postives = 17/27 (62.96%), Query Frame = 3
Query:  837 FGPVDLXSLSDAXNGFSLMNYDFSGPT 917
            FG  D   LS+  +G SLM YDF GP+
Sbjct:  233 FGAKDFELLSNHIDGVSLMTYDF-GPS 258          
BLAST of EY755479 vs. ExPASy Swiss-Prot
Match: CHID1_MOUSE (Chitinase domain-containing protein 1 OS=Mus musculus GN=Chid1 PE=2 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 9.402e-19
Identity = 62/203 (30.54%), Postives = 93/203 (45.81%), Query Frame = 1
Query:  232 MHQRGLVKTDVNYQEILTEN-SKVSENASHRYYTYPVLAYITPWNSKGYELAKMFNSKFTHLSPVWYDLKSQGTSLI-LEGRHNADAGWLLELIK--GDALVLPRVVLEAFPXXXXXXXXXXXXXXXXXXTE----CKEMEYDGIVLESWSTWTA---YGILHDPELRNMALEFIKQLGNALHSVNSVRNRKXTLQVVYVIGP 807
            +  RGLV TD+  ++++ E+ S  S  A  R +   VL Y+TPWNS GY++AK+F SKFT +SPVW  LK +G  +  + G H+ D GW+  + K      ++PR++ E +                          K   +DG V+E WS   +    G++H           +  L  ALH           L V+ VI P
Sbjct:   45 VQDRGLVVTDIKAEDVVLEHRSYCSSRARERNFAGEVLGYVTPWNSHGYDVAKVFGSKFTQISPVWLQLKRRGREMFEITGLHDVDQGWMRAVKKHAKGVRIVPRLLFEDWTYDDFRNVLDSEDEIEELSKTVAQVAKNQHFDGFVVEVWSQLLSQKHVGLIH----------MLTHLAEALHQAR--------LLVILVIPP 229          

HSP 2 Score: 23.483 bits (49), Expect = 9.402e-19
Identity = 9/20 (45.00%), Postives = 13/20 (65.00%), Query Frame = 3
Query:  849 DLXSLSDAXNGFSLMNYDFS 908
            +   L+   +GFSLM YD+S
Sbjct:  245 EFEQLAPILDGFSLMTYDYS 264          
BLAST of EY755479 vs. ExPASy Swiss-Prot
Match: CHID1_XENLA (Chitinase domain-containing protein 1 OS=Xenopus laevis GN=chid1 PE=2 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 9.402e-19
Identity = 54/190 (28.42%), Postives = 90/190 (47.37%), Query Frame = 1
Query:  205 TRANRSATHMHQRGLVKTDVNYQEILTEN-SKVSENASHRYYTYPVLAYITPWNSKGYELAKMFNSKFTHLSPVWYDLKSQGTSLI-LEGRHNADAGWLLELIK--GDALVLPRVVLEAFP----XXXXXXXXXXXXXXXXXXTECKEMEYDGIVLESWSTWTAYGILHDPELRNMALEFIKQLGNALHS 750
            T+   S T +  RGLV TDV  ++I+ E+ S  ++    R+ +  VL Y+TPWN  GY++AK F +KFT +S VW  ++ +G     + G H+ D GW+ ++ K      ++PR++ + +                          K+  +DG V+E WS           + R   +  +  +G ALHS
Sbjct:   36 TKTRLSDTSVQSRGLVSTDVKAKDIVLEHRSYCAKKLKERHVSADVLGYVTPWNGHGYDIAKTFAAKFTLISSVWLQIRRKGREAYQVTGLHDVDQGWIKDIRKTSKSTQIVPRILFDGWSYQDFESVFNSEDEIEELAGAMVQTAKDEHFDGFVVEVWSQLGG-------QKRQELVHLLIHIGEALHS 218          

HSP 2 Score: 27.335 bits (59), Expect = 9.402e-19
Identity = 11/26 (42.31%), Postives = 15/26 (57.69%), Query Frame = 3
Query:  837 FGPVDLXSLSDAXNGFSLMNYDFSGP 914
            FG  +   L+   + FSLM YD+S P
Sbjct:  241 FGRKEFDQLAPVVDSFSLMTYDYSSP 266          
BLAST of EY755479 vs. ExPASy Swiss-Prot
Match: CHID1_RAT (Chitinase domain-containing protein 1 OS=Rattus norvegicus GN=Chid1 PE=2 SV=2)

HSP 1 Score: 90.8929 bits (224), Expect = 1.223e-18
Identity = 62/203 (30.54%), Postives = 93/203 (45.81%), Query Frame = 1
Query:  232 MHQRGLVKTDVNYQEILTEN-SKVSENASHRYYTYPVLAYITPWNSKGYELAKMFNSKFTHLSPVWYDLKSQGTSLI-LEGRHNADAGWLLELIK--GDALVLPRVVLEAFPXXXXXXXXXXXXXXXXXXTE----CKEMEYDGIVLESWSTWTA---YGILHDPELRNMALEFIKQLGNALHSVNSVRNRKXTLQVVYVIGP 807
            +  RGLV TD+  ++++ E+ S  S  A  R +   VL Y+TPWNS GY++AK+F SKFT +SPVW  LK +G  +  + G H+ D GW+  + K      ++PR++ E +                          K   +DG V+E WS   +    G++H           +  L  ALH           L V+ VI P
Sbjct:   45 VQDRGLVVTDIKAEDVVLEHRSYCSARARERNFAGEVLGYVTPWNSHGYDVAKVFGSKFTQISPVWLQLKRRGREMFEITGLHDVDQGWMRAVKKHAKGVRIVPRLLFEDWTYDDFRSVLDSEDEIEELSKTVVQVAKNQHFDGFVVEVWSQLLSQKHVGLIH----------MLTHLAEALHQAR--------LLVILVIPP 229          

HSP 2 Score: 23.483 bits (49), Expect = 1.223e-18
Identity = 9/20 (45.00%), Postives = 13/20 (65.00%), Query Frame = 3
Query:  849 DLXSLSDAXNGFSLMNYDFS 908
            +   L+   +GFSLM YD+S
Sbjct:  245 EFEQLAPILDGFSLMTYDYS 264          
BLAST of EY755479 vs. ExPASy Swiss-Prot
Match: CHID1_XENTR (Chitinase domain-containing protein 1 OS=Xenopus tropicalis GN=chid1 PE=2 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 7.388e-17
Identity = 50/160 (31.25%), Postives = 81/160 (50.62%), Query Frame = 1
Query:  205 TRANRSATHMHQRGLVKTDVNYQEILTEN-SKVSENASHRYYTYPVLAYITPWNSKGYELAKMFNSKFTHLSPVWYDLKSQGTSLI-LEGRHNADAGWLLELIK--GDALVLPRVVLEAFP----XXXXXXXXXXXXXXXXXXTECKEMEYDGIVLESWS 660
            T+   S T +  RGLV TDV  ++I+ E+ S  ++    R+ +  VL Y+TPWN  GY++AK F +KFT +SPVW  +K +G     + G H+ D GW+ ++ K      ++PR++ + +                          K+  +DG V+E WS
Sbjct:   37 TKTRLSDTLVQTRGLVSTDVKAKDIVLEHRSYCAKKLKERHVSADVLGYVTPWNGHGYDIAKTFAAKFTLISPVWLQIKRKGKEAYHITGLHDVDQGWIKDIRKTSKSTQIVPRILFDGWSYQDFESVFSSEDEIEELAGAMVQTAKDERFDGFVVEVWS 196          
BLAST of EY755479 vs. ExPASy Swiss-Prot
Match: CHID1_PONAB (Chitinase domain-containing protein 1 OS=Pongo abelii GN=CHID1 PE=2 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 2.150e-16
Identity = 49/151 (32.45%), Postives = 77/151 (50.99%), Query Frame = 1
Query:  232 MHQRGLVKTDVNYQEILTEN-SKVSENASHRYYTYPVLAYITPWNSKGYELAKMFNSKFTHLSPVWYDLKSQGTSLI-LEGRHNADAGWLLELIK--GDALVLPRVVLEAFPXXXXXXXXXXXXXXXXXXTE----CKEMEYDGIVLESWS 660
            + +RGLV TD+  + ++ E+ S  S  A  R++   VL Y+TPWNS GY++ K+F SKFT +SPVW  LK +G  +  + G H+ D GW+  + K      ++PR++ E +                          K   +DG V+E W+
Sbjct:   45 VQERGLVVTDLKAESVVLEHRSYCSAKARDRHFAGDVLGYVTPWNSHGYDVTKVFGSKFTQISPVWLQLKRRGREMFEVTGLHDVDQGWMRAVRKHAKGLHIVPRLLFEDWTYDDFRNVLDSEDEIEELSKTVVQVAKNQHFDGFVVEVWN 195          
BLAST of EY755479 vs. ExPASy Swiss-Prot
Match: CHID1_HUMAN (Chitinase domain-containing protein 1 OS=Homo sapiens GN=CHID1 PE=1 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 3.667e-16
Identity = 49/151 (32.45%), Postives = 76/151 (50.33%), Query Frame = 1
Query:  232 MHQRGLVKTDVNYQEILTEN-SKVSENASHRYYTYPVLAYITPWNSKGYELAKMFNSKFTHLSPVWYDLKSQGTSLI-LEGRHNADAGWLLELIK--GDALVLPRVVLEAFPXXXXXXXXXXXXXXXXXXTE----CKEMEYDGIVLESWS 660
            +  RGLV TD+  + ++ E+ S  S  A  R++   VL Y+TPWNS GY++ K+F SKFT +SPVW  LK +G  +  + G H+ D GW+  + K      ++PR++ E +                          K   +DG V+E W+
Sbjct:   45 VQDRGLVVTDLKAESVVLEHRSYCSAKARDRHFAGDVLGYVTPWNSHGYDVTKVFGSKFTQISPVWLQLKRRGREMFEVTGLHDVDQGWMRAVRKHAKGLHIVPRLLFEDWTYDDFRNVLDSEDEIEELSKTVVQVAKNQHFDGFVVEVWN 195          
BLAST of EY755479 vs. ExPASy Swiss-Prot
Match: CHID1_DANRE (Chitinase domain-containing protein 1 OS=Danio rerio GN=chid1 PE=2 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 5.295e-15
Identity = 49/148 (33.11%), Postives = 74/148 (50.00%), Query Frame = 1
Query:  241 RGLVKTDVNYQEILTENSKVSENASH-RYYTYPVLAYITPWNSKGYELAKMFNSKFTHLSPVWYDLKSQG-TSLILEGRHNADAGWLLELIKGDA--LVLPRVVLEAFPXXXXXXXXXXXXXXXXXXTECKEME----YDGIVLESWS 660
            RGLV TD  +++I+ E  +      + R +   VL YITPWNS GY++AK+F  K T +SPVW  L+ +G  S  + G H+ D GW+  + K +    +LPR++ + +                    E  E+     +DG  LE WS
Sbjct:   47 RGLVVTDPQWRDIVREEKRFCHQCINTRQFKGAVLGYITPWNSHGYDIAKLFGPKLTSVSPVWLQLRRRGPESFHITGLHDHDPGWVKAVRKANKKNKILPRLLFDGWSYQDYVSVLDSEDEMEELGREALEVAKAEGFDGYTLELWS 194          
BLAST of EY755479 vs. ExPASy Swiss-Prot
Match: CHID1_BOVIN (Chitinase domain-containing protein 1 OS=Bos taurus GN=CHID1 PE=2 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 6.915e-15
Identity = 47/149 (31.54%), Postives = 75/149 (50.34%), Query Frame = 1
Query:  238 QRGLVKTDVNYQEILTEN-SKVSENASHRYYTYPVLAYITPWNSKGYELAKMFNSKFTHLSPVWYDLKSQGTSLI-LEGRHNADAGWLLELIK--GDALVLPRVVLEAFPXXXXXXXXXXXXXXXXXXTE----CKEMEYDGIVLESWS 660
            +RGLV TD+  ++++ E+ S  S  A  +++   VL YITPWN  GY++AK+F  KFTH++PVW  L+  G  +  + G  + D GWL  + K      ++PR+  E +                          K   +DG+V+E W+
Sbjct:   47 ERGLVVTDLRAEDVVLEHRSYCSAKAHRKHFAGDVLGYITPWNRHGYDVAKIFGGKFTHVAPVWLQLRRHGREMFEVTGLDDVDQGWLRAVRKQAKGLRIVPRLRFEDWTYEDFDSVLDNEDEIEELSRTVVQVAKSQHFDGLVVEVWN 195          
The following BLAST results are available for this feature:
BLAST of EY755479 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 9
Match NameE-valueIdentityDescription
CHID1_DICDI7.233e-1930.93Chitinase domain-containing protein 1 OS=Dictyoste... [more]
CHID1_MOUSE9.402e-1930.54Chitinase domain-containing protein 1 OS=Mus muscu... [more]
CHID1_XENLA9.402e-1928.42Chitinase domain-containing protein 1 OS=Xenopus l... [more]
CHID1_RAT1.223e-1830.54Chitinase domain-containing protein 1 OS=Rattus no... [more]
CHID1_XENTR7.388e-1731.25Chitinase domain-containing protein 1 OS=Xenopus t... [more]
CHID1_PONAB2.150e-1632.45Chitinase domain-containing protein 1 OS=Pongo abe... [more]
CHID1_HUMAN3.667e-1632.45Chitinase domain-containing protein 1 OS=Homo sapi... [more]
CHID1_DANRE5.295e-1533.11Chitinase domain-containing protein 1 OS=Danio rer... [more]
CHID1_BOVIN6.915e-1531.54Chitinase domain-containing protein 1 OS=Bos tauru... [more]
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Properties
Property NameValue
Genbank descriptionCS12-C1-001-028-G07-CT.F Sweet orange leaf, field plant A Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY755479 ID=EY755479; Name=EY755479; organism=Citrus sinensis; type=EST; length=936bp
AGGTTTTCGGTCCGGNATTCCCGGCTAAGGAGAGACCGCCGAGTTGCATT
TTGCCCGGGCCGTCCTAAAAACCGACTCGAATCGGCTGCTCGATTAGACC
AGTTCAGCGACTCAGCTTCCGATCGCAAGCTCATCACCATTTTCGTTATC
TTCTTCATCGTGATTCCCACCGTGTCCGTACTCTTATACTGTACCAAATA
CTCTACACGCGCCAACCGTTCGGCGACTCACATGCATCAGCGAGGACTCG
TCAAAACTGATGTGAATTACCAAGAAATCCTCACGGAGAATTCAAAGGTT
TCAGAGAATGCGTCCCATCGGTATTACACGTATCCCGTATTGGCCTATAT
TACTCCATGGAATTCTAAGGGCTATGAACTGGCCAAGATGTTCAATTCTA
AATTTACACACTTATCACCTGTTTGGTATGATCTCAAGAGCCAGGGAACT
AGCTTAATCCTGGAAGGAAGACATAATGCAGATGCAGGATGGCTTTTGGA
GCTTATAAAAGGAGATGCCCTGGTGTTACCCAGAGTGGTTCTGGAAGCAT
TTCCAAAGGAGCTTCTCAGAAAGAAGAAACTGAGGGACAAAGCCATTGAC
CTTATATTAACAGAGTGCAAGGAAATGGAATATGATGGTATAGTGCTAGA
GTCTTGGTCCACGTGGACAGCTTATGGCATTTTGCATGATCCAGAATTGC
GGAATATGGCACTAGAGTTTATAAAACAACTTGGAAATGCGCTGCACAGT
GTGAACTCAGTGAGAAACAGGAAGNNCACATTGCAGGTGGTCTATGTCAT
AGGTCCACCACATTCAGAGAAGTTCCACCACATGACTTTGGGCCAGTGGA
TCTGCANAGCTTGAGTGATGCCGNAAATGGTTTCTCATTAATGAACTATG
ACTTCTCAGGTCCCACTACCCTGGTCCTATGCNTCA
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