EY729990

Overview
NameEY729990
Unique NameEY729990
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length892
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY729990 vs. ExPASy Swiss-Prot
Match: TRXH_POPJC (Thioredoxin H-type OS=Populus jackii PE=1 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 2.293e-12
Identity = 32/49 (65.31%), Postives = 40/49 (81.63%), Query Frame = 2 
Query:   95 MGTCLSKRQHDEEDGEHPVEFAGGNVSLVTTKDIWDQKMSEASKEGKIV 241
            MG CL+KR HD +D E  +E AGGNV L+TTK+ WDQK+SEAS++GKIV
Sbjct:    1 MGLCLAKRNHDADDDEPHIELAGGNVHLITTKERWDQKLSEASRDGKIV 49
The following BLAST results are available for this feature:
BLAST of EY729990 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
TRXH_POPJC2.293e-1265.31Thioredoxin H-type OS=Populus jackii PE=1 SV=1[more]
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Properties
Property NameValue
Genbank descriptionCS00-C3-704-024-A10-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY729990 ID=EY729990; Name=EY729990; organism=Citrus sinensis; type=EST; length=892bp
CACGCGTCCGCTTCTCAATTCTGTGAACGTCGGCGTTTTGTTGTCTGGTT
ATCCGTCTGTTAACTGTTAGCTTTCAGGCCTTCAAAGCTTCAATATGGGA
ACGTGTTTGTCCAAGCGTCAACATGATGAGGAGGATGGTGAACACCCTGT
TGAGTTTGCTGGTGGGAATGTGAGTCTTGTTACTACCAAAGATATATGGG
ACCAAAAGATGTCAGAAGCTAGTAAGGAAGGGAAGATAGTAAGTTATCTG
TCACCTTATTTTCAGGCCAGAGAAAGAGCATTTAGCATATGCTGTCTGGG
ATTTTGATGATCATGTTGAATGGCCTGCTTTCGTTGTTTTGACCAGAATG
TTTTATGTTTTGTTGAGCATTCAAATCCTATAATGTGCCAACAAATCTGG
CCTTTATAAAGATTGGCACCCTTGCTCAAAATTTCACATTTGAGAATCAA
AGATTTACAGCAAATATATGTCCTTATTTAAAAATGTCAAATGTCATGTT
TGACGTTTGCATCACAGAATACCCGGCATCAATTATGAAGCTGGGAATAT
CGCTAATATCTTCAGTGAAGGAATTTAGGTCAAATATAATGAGTTCTGTT
CTAAAATTCTTTTAATATTGCATTTTGTGGATTCACGAAAAGAAAGTTGA
GTACATTATGCCTCATCACTGTTGCCTTTTATGTTTTCCTTCTCTGAATA
GATTGCTTCTTGGTGTAGCTAGATATTTGCTAGAAATTTTTTCCCACTCT
TACGGACAGAATACTCAATCCTGGCTTGCAGTNATAGTTCANTNAAGACT
GATTAGTGAAGTTANTTTGACTTATCTGATGAGTCTTCTTTCATAAATAT
ATGATTGAACAGGTGATTGCGAACTTCACCACTGGTGTCTGA
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